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Sed0012950 (gene) of Chayote v1 genome

Gene IDSed0012950
OrganismSechium edule (Chayote v1)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32-related protein 2
Genome locationLG02:50493802..50495447
RNA-Seq ExpressionSed0012950
SyntenySed0012950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582410.1 hypothetical protein SDJN03_22412, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3585.26Show/hide
Query:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        MGGDS+ VNG  E +VDS AA EVGD  NGED SESNALLPPRRGGMSRKS+KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
KAG6597344.1 hypothetical protein SDJN03_10524, partial [Cucurbita argyrosperma subsp. sororia]5.1e-3689.47Show/hide
Query:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        MGGDSKDV    EE VDSVAA EVGDSGNGED SESNALLPPRRGGMSRKS+KPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
XP_004134046.1 uncharacterized protein LOC101205158 [Cucumis sativus]4.6e-3788.17Show/hide
Query:  GDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        GDSKDVNGCKE+T+DS AA EVGD  NGE+ SESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  GDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
XP_022924268.1 uncharacterized protein LOC111431793 [Cucurbita moschata]2.5e-3585.26Show/hide
Query:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        MGGDS+ VNG  E +VDS AA EVGD  NGED SESNALLPPRRGGMSRKS+KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
XP_038897861.1 uncharacterized protein LOC120085750 [Benincasa hispida]7.8e-3786.32Show/hide
Query:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        M GDSKDVNGCKE+ +DS A  EVGD  NGE+ SESNALLPPRRGGMSRKS+KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
TrEMBL top hitse value%identityAlignment
A0A0A0L701 Uncharacterized protein2.2e-3788.17Show/hide
Query:  GDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        GDSKDVNGCKE+T+DS AA EVGD  NGE+ SESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  GDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
A0A1S3AX40 uncharacterized protein LOC103483558 isoform X24.6e-3586.81Show/hide
Query:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
        M GDSKDVNGCKE+T+DS AA EVGD  NGE+ SESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
A0A5A7U1V8 Uncharacterized protein4.6e-3586.81Show/hide
Query:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
        M GDSKDVNGCKE+T+DS AA EVGD  NGE+ SESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
A0A6J1EBY1 uncharacterized protein LOC1114317931.2e-3585.26Show/hide
Query:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        MGGDS+ VNG  E +VDS AA EVGD  NGED SESNALLPPRRGGMSRKS+KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
A0A6J1INK9 uncharacterized protein LOC1114791206.0e-3584.21Show/hide
Query:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        MGGDS+ VNG  E +VDS AA EVGD  N ED SESNALLPPRRGGMSRKS+KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34010.1 unknown protein6.4e-0548.89Show/hide
Query:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----EGDSCSCIIM
        R KV+W D+ G  +AE+ EF+PS+V +S DE     G SC C IM
Subjt:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----EGDSCSCIIM
AT1G55475.1 unknown protein6.4e-0546.51Show/hide
Query:  KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        + + KV+W D  G  LAEI EF+PSD  D   + G +C CII+
Subjt:  KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
AT2G33390.1 unknown protein1.1e-2049.46Show/hide
Query:  GDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        G+ K+ NGC+ + + S+ + E+ D    E+ SES  LLPPR+GGMSR +DK +  V+WND  G+NLAE+L ++PS+VSD+ D++ DSC C IM
Subjt:  GDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGTGATTCTAAGGATGTTAATGGCTGCAAAGAGGAGACTGTGGATTCTGTGGCTGCCGAAGAAGTTGGGGATTCCGGTAACGGCGAAGATTGCAGTGAATCGAA
TGCGTTACTGCCGCCACGGCGCGGTGGAATGTCGAGGAAATCGGATAAGCCGAGGATGAAAGTCCGTTGGAATGATAGCAATGGTAATAACCTAGCGGAGATTTTGGAGT
TCCAACCGAGCGATGTGAGCGACTCCGGGGACGAGGAGGGCGATTCTTGCAGCTGTATAATTATGTAG
mRNA sequenceShow/hide mRNA sequence
GGGTTTAATTTTCCGTCACTTTCTCGAGAAAATCTATCTTTTCTAATCCCCTTTCTTCTTTGTTTGGTTAACATTTTAGATCGGGGGTTTTTGCTTTCCAAAGAGGGGTC
TTTGAACCAGTGAGCGTTGACCCAGTTCTTGAATTTGAGTATCCAGTGGTTGGATTGTGGAATTATTTTCTGGGGTTTTGGATGAATTTGATTTCTGAGATGATTCGGTT
CAGAAATCTGAAATTTGTGTCCGATTTTTGGCGTAGCTGATAGGGTAGATTTCCGATTCGATTTGTAGTTTGTGAGAGTTTTGAACTATGGGTGGTGATTCTAAGGATGT
TAATGGCTGCAAAGAGGAGACTGTGGATTCTGTGGCTGCCGAAGAAGTTGGGGATTCCGGTAACGGCGAAGATTGCAGTGAATCGAATGCGTTACTGCCGCCACGGCGCG
GTGGAATGTCGAGGAAATCGGATAAGCCGAGGATGAAAGTCCGTTGGAATGATAGCAATGGTAATAACCTAGCGGAGATTTTGGAGTTCCAACCGAGCGATGTGAGCGAC
TCCGGGGACGAGGAGGGCGATTCTTGCAGCTGTATAATTATGTAGATTTTTACATCAAATATTAGTGTATAATGACAAGAACTATGTAGATGCTTTACTGCTAAACTGAC
AGTCATTGGTGGTGTTTCTGACTGTATAACGATTGCTTTGCTACAACGACGAGTTCAAAGATCAACCGATTAATATGTTGTTTTCCCTTGCGGCGTTTGGCGATGTGTCC
CTGGTGACATCTTGTAGTGTTTCGATTTTCGAGTTTGTAAGATCACCTTCCAAGTGATATATTCTATATTAATGATGCTGATAATGATGTTATTATATAACAAACATTCA
GATTAGTTAAGCATTTGACAATGCAGAATAATACATTTTGTGTAGTACATAAACTTGGATTTCCC
Protein sequenceShow/hide protein sequence
MGGDSKDVNGCKEETVDSVAAEEVGDSGNGEDCSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM