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Sed0012962 (gene) of Chayote v1 genome

Gene IDSed0012962
OrganismSechium edule (Chayote v1)
DescriptionDUF295 domain-containing protein
Genome locationLG10:9256146..9256956
RNA-Seq ExpressionSed0012962
SyntenySed0012962
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594746.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2344.59Show/hide
Query:  WLAKVESTKFGEIHF-RTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAK
        WLAKVESTK G + F       +  Y  +  +     ++ N LD R +EVA+SY+L  +  G  V  +TKVV+ PD  W D   CTIVA+Y GG LGFAK
Subjt:  WLAKVESTKFGEIHF-RTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAK

Query:  HKGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS
        H    WTLID+ NF YDD+IVYK Q   V+R    +W      +  FS
Subjt:  HKGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS

XP_022926986.1 putative F-box protein At1g65770 isoform X1 [Cucurbita moschata]1.3e-2344.59Show/hide
Query:  WLAKVESTKFGEIHF-RTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAK
        WLAKVESTK G + F       +  Y  +  +     ++ N LD R +EVA+SY+L  +  G  V  +TKVV+ PD  W D   CTIVA+Y GG LGFAK
Subjt:  WLAKVESTKFGEIHF-RTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAK

Query:  HKGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS
        H    WTLID+ NF YDD+IVYK Q   V+R    +W      +  FS
Subjt:  HKGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS

XP_023003897.1 putative F-box protein At1g65770 isoform X1 [Cucurbita maxima]9.7e-2444.59Show/hide
Query:  WLAKVESTKFGEIHF-RTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAK
        WLAKVESTK G + F       +  Y  +  +     ++ N LD R +EVA+SY+L  +  G  V  +TKVV+ PD  W D   CTIVA+Y GG LGFAK
Subjt:  WLAKVESTKFGEIHF-RTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAK

Query:  HKGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS
        H    WTLID+ NF YDD+IVYK Q   V+R    +W      +  FS
Subjt:  HKGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS

XP_023518907.1 putative F-box protein At1g65770 isoform X1 [Cucurbita pepo subsp. pepo]1.3e-2344.59Show/hide
Query:  WLAKVESTKFGEIHF-RTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAK
        WLAKVESTK G + F       +  Y  +  +     ++ N LD R +EVA+SY+L  +  G  V  +TKVV+ PD  W D   CTIVA+Y GG LGFAK
Subjt:  WLAKVESTKFGEIHF-RTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAK

Query:  HKGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS
        H    WTLID+ NF YDD+IVYK Q   V+R    +W      +  FS
Subjt:  HKGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS

XP_038881861.1 putative F-box protein At1g65770 [Benincasa hispida]1.5e-2446.26Show/hide
Query:  WLAKVESTKFGEIHFRTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAKH
        WLAKVESTK G++ F   + +  + +   L F K   + N LD   +EVA+SY+L  +  G  V  +TKVV+ PDS W D  NCTI+A+Y GG LGFAKH
Subjt:  WLAKVESTKFGEIHFRTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAKH

Query:  KGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS
            WTLID+ NF YDD+IVYK Q   V+R    +W      +  FS
Subjt:  KGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS

TrEMBL top hitse value%identityAlignment
A0A0A0KJJ1 Uncharacterized protein4.0e-2345.58Show/hide
Query:  WLAKVESTKFGEIHFRTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAKH
        WLAKVESTK G++ F   +    + + K    L   ++ N LD   +EVA+SY+L  +  G  V  +TKVV+ PDS W D   CTI+AIY GG LGFAKH
Subjt:  WLAKVESTKFGEIHFRTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAKH

Query:  KGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS
            WTLID  NF YDD+IVYK Q   V+R    +W      +  FS
Subjt:  KGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS

A0A1S4DT77 putative F-box protein At1g657701.8e-2344.9Show/hide
Query:  WLAKVESTKFGEIHFRTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAKH
        WLAKVESTK G++ F   +    + + K    L   ++ N LD   +EVA+SY+L  +  G  V  +TKVV+ PDS W D   CTI+A+Y GG LGFAKH
Subjt:  WLAKVESTKFGEIHFRTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAKH

Query:  KGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS
            WTLID  NF YDD+IVYK Q   V+R    +W      +  FS
Subjt:  KGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS

A0A5A7SHJ7 Putative F-box protein1.8e-2344.9Show/hide
Query:  WLAKVESTKFGEIHFRTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAKH
        WLAKVESTK G++ F   +    + + K    L   ++ N LD   +EVA+SY+L  +  G  V  +TKVV+ PDS W D   CTI+A+Y GG LGFAKH
Subjt:  WLAKVESTKFGEIHFRTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAKH

Query:  KGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS
            WTLID  NF YDD+IVYK Q   V+R    +W      +  FS
Subjt:  KGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS

A0A6J1EGF3 putative F-box protein At1g65770 isoform X16.1e-2444.59Show/hide
Query:  WLAKVESTKFGEIHF-RTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAK
        WLAKVESTK G + F       +  Y  +  +     ++ N LD R +EVA+SY+L  +  G  V  +TKVV+ PD  W D   CTIVA+Y GG LGFAK
Subjt:  WLAKVESTKFGEIHF-RTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAK

Query:  HKGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS
        H    WTLID+ NF YDD+IVYK Q   V+R    +W      +  FS
Subjt:  HKGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS

A0A6J1KNW7 putative F-box protein At1g65770 isoform X14.7e-2444.59Show/hide
Query:  WLAKVESTKFGEIHF-RTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAK
        WLAKVESTK G + F       +  Y  +  +     ++ N LD R +EVA+SY+L  +  G  V  +TKVV+ PD  W D   CTIVA+Y GG LGFAK
Subjt:  WLAKVESTKFGEIHF-RTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAK

Query:  HKGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS
        H    WTLID+ NF YDD+IVYK Q   V+R    +W      +  FS
Subjt:  HKGQNWTLIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGCGAGCTGGTTAGCTAAGGTGGAGAGTACAAAGTTCGGTGAAATCCATTTTCGGACGTGCATGCTATCATTTGAAAGCTATTTTGGTAAACCTTTGAAATTTTT
AAAAAATCCTCGTAAAGCCAACTGGCTCGATCTTCGTTTTCACGAAGTAGCTAGATCGTATTCGCTCGAAAACTTCTATATTGGTTGTGATGTTCATGGAGTTACCAAGG
TTGTACTGTCTCCTGATTCTCTTTGGACCGATCGCAACAACTGCACCATTGTAGCCATTTACAATGGAGGGACACTAGGGTTTGCTAAACACAAAGGGCAAAATTGGACG
CTAATTGATGAACATAACTTTGATTATGATGATTTGATTGTGTACAAGGAGCAGATTCTTACAGTTAACAGACAAGAAAACGATTGGTGGAGTGCGGTGAAAAAATCGGT
TTCTATGTTTTCGATAGGGCTCCGCACTCGGATGCAATCGCGGGTGAAATGGAATTTGAATATCTCCTTCCAGGCTGATCCAGAAACAGGGAAGATGGGAGGAGGTGAGG
GATTTGGGAGATCATGCCTTTCTTTTGGGGATAGATTGTTGTTTCTCAGTTTCAGCCCCAAAAAGTGTTGGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGCGAGCTGGTTAGCTAAGGTGGAGAGTACAAAGTTCGGTGAAATCCATTTTCGGACGTGCATGCTATCATTTGAAAGCTATTTTGGTAAACCTTTGAAATTTTT
AAAAAATCCTCGTAAAGCCAACTGGCTCGATCTTCGTTTTCACGAAGTAGCTAGATCGTATTCGCTCGAAAACTTCTATATTGGTTGTGATGTTCATGGAGTTACCAAGG
TTGTACTGTCTCCTGATTCTCTTTGGACCGATCGCAACAACTGCACCATTGTAGCCATTTACAATGGAGGGACACTAGGGTTTGCTAAACACAAAGGGCAAAATTGGACG
CTAATTGATGAACATAACTTTGATTATGATGATTTGATTGTGTACAAGGAGCAGATTCTTACAGTTAACAGACAAGAAAACGATTGGTGGAGTGCGGTGAAAAAATCGGT
TTCTATGTTTTCGATAGGGCTCCGCACTCGGATGCAATCGCGGGTGAAATGGAATTTGAATATCTCCTTCCAGGCTGATCCAGAAACAGGGAAGATGGGAGGAGGTGAGG
GATTTGGGAGATCATGCCTTTCTTTTGGGGATAGATTGTTGTTTCTCAGTTTCAGCCCCAAAAAGTGTTGGACTTGA
Protein sequenceShow/hide protein sequence
MPASWLAKVESTKFGEIHFRTCMLSFESYFGKPLKFLKNPRKANWLDLRFHEVARSYSLENFYIGCDVHGVTKVVLSPDSLWTDRNNCTIVAIYNGGTLGFAKHKGQNWT
LIDEHNFDYDDLIVYKEQILTVNRQENDWWSAVKKSVSMFSIGLRTRMQSRVKWNLNISFQADPETGKMGGGEGFGRSCLSFGDRLLFLSFSPKKCWT