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Sed0012963 (gene) of Chayote v1 genome

Gene IDSed0012963
OrganismSechium edule (Chayote v1)
Descriptionzf-RVT domain-containing protein
Genome locationLG11:19357530..19358144
RNA-Seq ExpressionSed0012963
SyntenySed0012963
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY58380.1 hypothetical protein CUMW_186600 [Citrus unshiu]1.4e-1626.55Show/hide
Query:  DAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNATVPSKI----------------NLNKRGMICDVLCKRFHSHVETSFHAIWDCR
        D  LWHY+K+  ++VKS++ + ++++     S    ++  WN +W   +P K+                N  +R ++ D LCKR     ET++H +++CR
Subjt:  DAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNATVPSKI----------------NLNKRGMICDVLCKRFHSHVETSFHAIWDCR

Query:  CVKNYWKESPFFHVGPPNVTMEVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYRLFDLRYQNVWD
          +  WK +P        +   + D+L    +  N+ ++E  + +CW IW+ RNL V  +  E +RL   R + + D
Subjt:  CVKNYWKESPFFHVGPPNVTMEVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYRLFDLRYQNVWD

KAF4347301.1 hypothetical protein G4B88_018350 [Cannabis sativa]2.3e-1628.24Show/hide
Query:  GDDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNAT----------------VPSKINLNKRGMICDVLCKRFHSHVETSFHAIWD
        G+D ++W+    G +TV S++ +    +    +S+K ++K WW  VW++                 VPSK  L KRG+  D  C    + +ET  HAIW 
Subjt:  GDDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNAT----------------VPSKINLNKRGMICDVLCKRFHSHVETSFHAIWD

Query:  CRCVKNYWKESPFFHVGPPNVTM--EVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYR
        C  +K  WKE+  +H+ P ++ +  ++ + L++   K ++   E FL M W +W+ RN  +      P +
Subjt:  CRCVKNYWKESPFFHVGPPNVTM--EVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYR

KAF4359788.1 hypothetical protein F8388_008350 [Cannabis sativa]1.8e-1627Show/hide
Query:  DDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVW----------------NATVPSKINLNKRGMICDVLCKR-FHSHVETSFHAIWD
        +D ++WHY K G ++V + + L  +L  E + S       WWN +W                ++ +P+K++L  RGM  D  C R    + E  FHA+W 
Subjt:  DDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVW----------------NATVPSKINLNKRGMICDVLCKR-FHSHVETSFHAIWD

Query:  CRCVKNYWKESPFFHVGPPNVTMEVADLLLWFIKKLNSL----QMEEFLMMCWRIWNGRNLVVLNKVEEPYRLFDLRYQNVWDYCSLYVEEFRGANQSIQ
        CRC  + WK+S  +       T  V    + F++ LN +      + FL++ W +W+ RN  VL+    P      R  +V+++C  Y++++  A   ++
Subjt:  CRCVKNYWKESPFFHVGPPNVTMEVADLLLWFIKKLNSL----QMEEFLMMCWRIWNGRNLVVLNKVEEPYRLFDLRYQNVWDYCSLYVEEFRGANQSIQ

XP_030497545.1 uncharacterized protein LOC115713201 [Cannabis sativa]3.6e-1731.28Show/hide
Query:  DAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNATVPSKIN----------------LNKRGMICDVLCKRFHSHVETSFHAIWDCR
        D ++W    +G+FTVKSA+ L +  R  P+SS  D  K +W+ +W+++VPSK+                 L  R +I   +C   HS  ET  H    C 
Subjt:  DAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNATVPSKIN----------------LNKRGMICDVLCKRFHSHVETSFHAIWDCR

Query:  CVKNYWKESPFFHVGPPNVTMEVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLN-KVEEPYRLFDLRYQNVWDY
         VK  WK SP FH    N  + + D +   I  L+      F    W +WN RN +  N K+  P+ L+D     + +Y
Subjt:  CVKNYWKESPFFHVGPPNVTMEVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLN-KVEEPYRLFDLRYQNVWDY

XP_030506074.1 uncharacterized protein LOC115720986 [Cannabis sativa]3.0e-1628.24Show/hide
Query:  GDDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNAT----------------VPSKINLNKRGMICDVLCKRFHSHVETSFHAIWD
        G+D ++W+    G +TV S + +    +    +S+K ++K WW  VW++                 VPSK  L KRG+  D  C    + +ET  HAIW 
Subjt:  GDDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNAT----------------VPSKINLNKRGMICDVLCKRFHSHVETSFHAIWD

Query:  CRCVKNYWKESPFFHVGPPNVTM--EVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYR
        C  +K  WKE+  +H+ P ++ +  ++ + L++   K ++   E FL M W +W+ RN  +      P +
Subjt:  CRCVKNYWKESPFFHVGPPNVTM--EVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYR

TrEMBL top hitse value%identityAlignment
A0A803NT49 Uncharacterized protein2.4e-1930.41Show/hide
Query:  GDDAVLWHYEKTGVFTVKSAH-WLGIELRGEPTSSHKDMSKAWWNYVWNAT----------------VPSKINLNKRGMICDVLCKRFHSHVETSFHAIW
        G+D ++W+Y   G +TV S +  + IE +G  TS  K + + WW  VW++                 VPSK  L K+G+  D++C    S+VET  HA+W
Subjt:  GDDAVLWHYEKTGVFTVKSAH-WLGIELRGEPTSSHKDMSKAWWNYVWNAT----------------VPSKINLNKRGMICDVLCKRFHSHVETSFHAIW

Query:  DCRCVKNYWKESPFFHVGPPNVTM--EVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYR
         C  +++ WKE+ F+H+ P ++ +  ++ D L++   K +  + E FL + W +W+ R+  +    E P +
Subjt:  DCRCVKNYWKESPFFHVGPPNVTM--EVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYR

A0A803PCN1 Uncharacterized protein1.2e-1829.27Show/hide
Query:  GDDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNAT----------------VPSKINLNKRGMICDVLCKRFHSHVETSFHAIWD
        G+D ++WH   TG + V S + +    +  P SS+KDM + WW  +WN+                 +P+K  L KRG+  D  C    S  ET  HA+W 
Subjt:  GDDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNAT----------------VPSKINLNKRGMICDVLCKRFHSHVETSFHAIWD

Query:  CRCVKNYWKESPFFHVGPPNVTM--EVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNK
        C  +K  WKE+ F+H+ P ++ +  ++ + L++   + +  + + FL + W +W+ RN  +  K
Subjt:  CRCVKNYWKESPFFHVGPPNVTM--EVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNK

A0A803Q1K6 Uncharacterized protein1.8e-1930.77Show/hide
Query:  DDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNATVPSK----------------INLNKRGMICDVLCKRFHSHVETSF-HAIWD
        +D +LWHY K G ++VKS + +   L  E   S++     WW  +W    P K                +NL KRG+   V+C R  SHVE S  HA+W+
Subjt:  DDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNATVPSK----------------INLNKRGMICDVLCKRFHSHVETSF-HAIWD

Query:  CRCVKNYWKESPFFH-----VGPPNVTMEVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYRLFDLRYQNVWDYCSLYVEEFRG
        C+  K YW+ S  +      +G  N++M +     W  +KL     E FL++ W IWN RN VV       +  +  + + + ++C  ++  FRG
Subjt:  CRCVKNYWKESPFFH-----VGPPNVTMEVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYRLFDLRYQNVWDYCSLYVEEFRG

A0A803QE56 Uncharacterized protein3.0e-1727.69Show/hide
Query:  DDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNATVPSKIN----------------LNKRGMICDVLCKR-FHSHVETSFHAIWD
        +D ++WHY K G ++VKS + + +ELR E T S++    AWW  +W   +P K+                 L  RGM  D  C R  +   E  FHA+W 
Subjt:  DDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNATVPSKIN----------------LNKRGMICDVLCKR-FHSHVETSFHAIWD

Query:  CRCVKNYWKESPFFHVGPPNVTMEVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYRLFDLRYQNVWDYCSLYVEEFRGANQSI
        C   K+ WK     H      + +V    +   K       E FL++ W++W  RN      ++        +   V+++C  Y+EE+RG   ++
Subjt:  CRCVKNYWKESPFFHVGPPNVTMEVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYRLFDLRYQNVWDYCSLYVEEFRGANQSI

A0A803QQT2 Uncharacterized protein1.1e-1930.26Show/hide
Query:  DDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNATVPSK----------------INLNKRGMICDVLCKRFHSHVETSF-HAIWD
        +D +LWHY K G ++VKS + +      E   S++     WW  +W   +P K                +NL KRG+   V+C R  SHV+ S  HA+W+
Subjt:  DDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNATVPSK----------------INLNKRGMICDVLCKRFHSHVETSF-HAIWD

Query:  CRCVKNYWKESPFFH-----VGPPNVTMEVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYRLFDLRYQNVWDYCSLYVEEFRG
        C+  K YW+ S  +      +G  N+TM +     W  +KL     E FL++ W IWN RN VV       +  +  + + + ++C  ++ +FRG
Subjt:  CRCVKNYWKESPFFH-----VGPPNVTMEVADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYRLFDLRYQNVWDYCSLYVEEFRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGATGATGCCGTATTGTGGCACTATGAGAAAACTGGAGTGTTTACGGTTAAGTCAGCTCATTGGCTTGGTATCGAACTAAGGGGGGAGCCTACTTCATCACATAA
AGACATGTCAAAAGCTTGGTGGAACTACGTTTGGAATGCAACAGTCCCTAGTAAGATCAATTTAAATAAAAGAGGAATGATTTGTGATGTGCTTTGCAAGAGATTCCACT
CTCATGTGGAAACAAGTTTCCATGCGATCTGGGATTGTAGATGTGTTAAAAATTATTGGAAGGAGTCTCCTTTCTTTCATGTTGGACCGCCAAACGTTACGATGGAAGTG
GCAGATTTGCTACTTTGGTTTATTAAGAAGTTGAATTCTTTGCAAATGGAGGAGTTTTTGATGATGTGTTGGCGGATATGGAATGGAAGAAATTTGGTCGTGCTTAATAA
AGTGGAGGAACCTTATAGGCTTTTCGATCTTAGGTATCAAAATGTTTGGGATTATTGTTCACTATATGTTGAAGAGTTTAGAGGTGCTAATCAATCTATTCAATCTGAGT
TGATTACACAGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGATGATGCCGTATTGTGGCACTATGAGAAAACTGGAGTGTTTACGGTTAAGTCAGCTCATTGGCTTGGTATCGAACTAAGGGGGGAGCCTACTTCATCACATAA
AGACATGTCAAAAGCTTGGTGGAACTACGTTTGGAATGCAACAGTCCCTAGTAAGATCAATTTAAATAAAAGAGGAATGATTTGTGATGTGCTTTGCAAGAGATTCCACT
CTCATGTGGAAACAAGTTTCCATGCGATCTGGGATTGTAGATGTGTTAAAAATTATTGGAAGGAGTCTCCTTTCTTTCATGTTGGACCGCCAAACGTTACGATGGAAGTG
GCAGATTTGCTACTTTGGTTTATTAAGAAGTTGAATTCTTTGCAAATGGAGGAGTTTTTGATGATGTGTTGGCGGATATGGAATGGAAGAAATTTGGTCGTGCTTAATAA
AGTGGAGGAACCTTATAGGCTTTTCGATCTTAGGTATCAAAATGTTTGGGATTATTGTTCACTATATGTTGAAGAGTTTAGAGGTGCTAATCAATCTATTCAATCTGAGT
TGATTACACAGAACTAG
Protein sequenceShow/hide protein sequence
MGDDAVLWHYEKTGVFTVKSAHWLGIELRGEPTSSHKDMSKAWWNYVWNATVPSKINLNKRGMICDVLCKRFHSHVETSFHAIWDCRCVKNYWKESPFFHVGPPNVTMEV
ADLLLWFIKKLNSLQMEEFLMMCWRIWNGRNLVVLNKVEEPYRLFDLRYQNVWDYCSLYVEEFRGANQSIQSELITQN