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Sed0012966 (gene) of Chayote v1 genome

Gene IDSed0012966
OrganismSechium edule (Chayote v1)
DescriptionCRAL-TRIO domain-containing protein
Genome locationLG11:26858409..26859888
RNA-Seq ExpressionSed0012966
SyntenySed0012966
Gene Ontology termsNA
InterPro domainsIPR001251 - CRAL-TRIO lipid binding domain
IPR036865 - CRAL-TRIO lipid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598524.1 Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia]7.8e-5383.59Show/hide
Query:  SSSSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIP
        SSSSSSS  SLSDQLHLLGK EVFKLHGRD++ RNV LIV K+FPARFVS  AVN+YLKDKIFPFLKD PF++VYIHTDVHWTENFPGISNLKAIYE IP
Subjt:  SSSSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIP

Query:  ITIKSNIEAVYFVHPGLQARLFFATVGR
         TIK+N++AVYFVHP LQARLFFATVGR
Subjt:  ITIKSNIEAVYFVHPGLQARLFFATVGR

KAG7029460.1 Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-5283.46Show/hide
Query:  SSSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPI
        SSSSSS  SLSDQLHLLGK EVFKLHGRD++ RNV LIV K+FPARFVS  AVN+YLKDKIFPFLKD PF++VYIHTDVHWTENFPGISNLKAIYE IP 
Subjt:  SSSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPI

Query:  TIKSNIEAVYFVHPGLQARLFFATVGR
        TIK+N++AVYFVHP LQARLFFATVGR
Subjt:  TIKSNIEAVYFVHPGLQARLFFATVGR

XP_016899965.1 PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Cucumis melo]1.3e-5286.18Show/hide
Query:  SSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKS
        SS  SLSDQLHLLGKVEVF+LHGRDK+ RNVLLIV KYFPARFVS  AVNVYLKDKIFP LKD PF+VVYIHTDVHWTEN PGISNLKAIYEAIPITIK+
Subjt:  SSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKS

Query:  NIEAVYFVHPGLQARLFFATVGR
        NIEAVYF+HP LQ R+FFATVGR
Subjt:  NIEAVYFVHPGLQARLFFATVGR

XP_031737047.1 ganglioside-induced differentiation-associated-protein 2-like [Cucumis sativus]2.7e-5385.71Show/hide
Query:  SSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPIT
        S SSS  SLSDQLHLLGKVEVF+LHGRDK+ RNVLLIV KYFPARFVS  AVNVYLKDKIFP LKD PF+VVYIHTDVHWTEN PGISNLKAIYEAIPIT
Subjt:  SSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPIT

Query:  IKSNIEAVYFVHPGLQARLFFATVGR
        IK+NIEAVYF+HP LQ R+FFATVGR
Subjt:  IKSNIEAVYFVHPGLQARLFFATVGR

XP_038884815.1 ganglioside-induced differentiation-associated protein 2-like [Benincasa hispida]5.9e-5387.9Show/hide
Query:  SSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDE-PFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIK
        SS   LSDQLHLL KVEVFKLHGRDK+ RNVLLIV KYFPARFVS  AVNVYLKDKIFPFLKD+ PF+VVYIHTDVHWTENFPGISNLKAIYEAIPITIK
Subjt:  SSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDE-PFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIK

Query:  SNIEAVYFVHPGLQARLFFATVGR
         NIEAVYF+HPGLQAR+FFATVGR
Subjt:  SNIEAVYFVHPGLQARLFFATVGR

TrEMBL top hitse value%identityAlignment
A0A0A0LML6 CRAL-TRIO domain-containing protein1.3e-5385.71Show/hide
Query:  SSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPIT
        S SSS  SLSDQLHLLGKVEVF+LHGRDK+ RNVLLIV KYFPARFVS  AVNVYLKDKIFP LKD PF+VVYIHTDVHWTEN PGISNLKAIYEAIPIT
Subjt:  SSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPIT

Query:  IKSNIEAVYFVHPGLQARLFFATVGR
        IK+NIEAVYF+HP LQ R+FFATVGR
Subjt:  IKSNIEAVYFVHPGLQARLFFATVGR

A0A1S4DW79 ganglioside-induced differentiation-associated protein 2-like6.4e-5386.18Show/hide
Query:  SSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKS
        SS  SLSDQLHLLGKVEVF+LHGRDK+ RNVLLIV KYFPARFVS  AVNVYLKDKIFP LKD PF+VVYIHTDVHWTEN PGISNLKAIYEAIPITIK+
Subjt:  SSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKS

Query:  NIEAVYFVHPGLQARLFFATVGR
        NIEAVYF+HP LQ R+FFATVGR
Subjt:  NIEAVYFVHPGLQARLFFATVGR

A0A5A7VHB1 Ganglioside-induced differentiation-associated protein 2-like1.9e-5286.07Show/hide
Query:  SCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSN
        S  SLSDQLHLLGKVEVF+LHGRDK+ RNVLLIV KYFPARFVS  AVNVYLKDKIFP LKD PF+VVYIHTDVHWTEN PGISNLKAIYEAIPITIK+N
Subjt:  SCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSN

Query:  IEAVYFVHPGLQARLFFATVGR
        IEAVYF+HP LQ R+FFATVGR
Subjt:  IEAVYFVHPGLQARLFFATVGR

A0A6J1CST5 uncharacterized protein LOC1110139791.9e-4978.91Show/hide
Query:  SSSSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIP
        +SSSS S  SL DQLHLL KVEVF LHGRDK+ RNVLLIV KYFPARFVS  AV+ YLKDKIFP LK+ PF+VVY+HTDVHWTENFPG+S LKAI +AIP
Subjt:  SSSSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIP

Query:  ITIKSNIEAVYFVHPGLQARLFFATVGR
        IT+K++IEAVYFVHPGLQ+RLFFATVGR
Subjt:  ITIKSNIEAVYFVHPGLQARLFFATVGR

A0A6J1KC43 protein GDAP2 homolog1.3e-5083.19Show/hide
Query:  SLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEA
        SLSDQLHLLGK EVFKLHGRD++ RNV LIV K+FPARFVS  AVN+YLKDKIFPF+KD PF++VYIHTDVHWTENFPGISNLKAIYE IP  IK+N++A
Subjt:  SLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEA

Query:  VYFVHPGLQARLFFATVGR
        VYFVHPGLQARLFFATVGR
Subjt:  VYFVHPGLQARLFFATVGR

SwissProt top hitse value%identityAlignment
A7T167 Protein GDAP2 homolog6.3e-0534.95Show/hide
Query:  GRDKSSRNVLLIVAKYFPARFVS-GLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWT-ENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARL---F
        G D   R V++ VA++F A+    G AV  ++   +   + +  + VVY HT  H T EN P +S LK +Y  +    + N++A Y VHP + AR+   F
Subjt:  GRDKSSRNVLLIVAKYFPARFVS-GLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWT-ENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARL---F

Query:  FAT
        F T
Subjt:  FAT

Arabidopsis top hitse value%identityAlignment
AT3G10210.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein3.7e-2143.24Show/hide
Query:  LGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGL
        L  ++ F L G D+S   +  IV KYFPAR VS   +  Y+  KI     + P  +VY+H+ V   +N PGI+ L+ IYE +P  IK  ++ VYF+HPGL
Subjt:  LGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGL

Query:  QARLFFATVGR
        ++RL  AT+GR
Subjt:  QARLFFATVGR

AT4G35750.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein1.2e-3555.28Show/hide
Query:  SSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKS
        SS  S  +Q  L+ K+E+FK+HGRDK  R +L I+ K+FPARF+S   +  YL++KIFP L  +PF+V+Y+HT V  +ENFPGIS L+AIY+AIP+ ++ 
Subjt:  SSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKS

Query:  NIEAVYFVHPGLQARLFFATVGR
        N++ VYF+HPGLQ+RLF AT GR
Subjt:  NIEAVYFVHPGLQARLFFATVGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTTCTTCTTCTTCTTCTTCTTGTTTTTCTCTTTCCGACCAACTTCACCTCCTCGGAAAAGTCGAGGTTTTTAAACTTCATGGTCGTGATAAATCCTCCCGCAA
TGTCCTCCTCATTGTTGCAAAATACTTTCCAGCACGGTTCGTGAGCGGCCTGGCCGTGAATGTTTATCTAAAGGACAAAATTTTCCCCTTTCTAAAAGATGAGCCATTCT
CGGTGGTGTACATTCACACAGACGTTCATTGGACAGAGAATTTCCCAGGAATCTCCAATCTGAAGGCAATCTATGAGGCAATTCCAATCACCATTAAGAGCAACATTGAA
GCTGTCTATTTTGTCCACCCGGGTTTGCAGGCCCGTCTGTTCTTCGCCACCGTCGGCCGCCCTCGTGCTCGACGCCGAGGTATACAACAAGGTGAAATATGTGAAAAGGC
TGGAGTTTTTGTGGGATTTTGTGAGAAGGAAAGAAATGGAGTTGCCTGA
mRNA sequenceShow/hide mRNA sequence
GTACTTGTAACTTTTCATCATGAAATCTTCTTCTTCTTCTTCTTCTTGTTTTTCTCTTTCCGACCAACTTCACCTCCTCGGAAAAGTCGAGGTTTTTAAACTTCATGGTC
GTGATAAATCCTCCCGCAATGTCCTCCTCATTGTTGCAAAATACTTTCCAGCACGGTTCGTGAGCGGCCTGGCCGTGAATGTTTATCTAAAGGACAAAATTTTCCCCTTT
CTAAAAGATGAGCCATTCTCGGTGGTGTACATTCACACAGACGTTCATTGGACAGAGAATTTCCCAGGAATCTCCAATCTGAAGGCAATCTATGAGGCAATTCCAATCAC
CATTAAGAGCAACATTGAAGCTGTCTATTTTGTCCACCCGGGTTTGCAGGCCCGTCTGTTCTTCGCCACCGTCGGCCGCCCTCGTGCTCGACGCCGAGGTATACAACAAG
GTGAAATATGTGAAAAGGCTGGAGTTTTTGTGGGATTTTGTGAGAAGGAAAGAAATGGAGTTGCCTGAATTTGTGTATGATCATGATGAGAAATTGGAGCTTTGTTCTGT
GATGAAGAACTCTGGTTTGGAGAATGATTATCTGCGAGTCTTCTCCGCCTTGTCGTCTGTCGATTCCGCGGTTTCGACTTACTCCATGAGGTGTTTTGCTTGATGATGAA
GAAAACTTTAAATGTTGTAATTGACTAAGTTATAGACTTTCTGTAGGCAAAGTTGGGGTCTTTTTCTGAGCTTTGCTTGTGAAGAAAGGCACAGTTAGAACTTCATGGGA
GATGCAGTTATAAATGAAGGTGTTACTGGTTTTTAAACTATATTGCTGTTCATCTTTGAATATAATATTTGTTCATGTCAGATTTGTAAATAACGAGAATTAGAAACAGA
AAATTAAAATGAACAAGTTTAAATTATGTAGAAGAGTTTGATTGGGT
Protein sequenceShow/hide protein sequence
MKSSSSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIE
AVYFVHPGLQARLFFATVGRPRARRRGIQQGEICEKAGVFVGFCEKERNGVA