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Sed0012982 (gene) of Chayote v1 genome

Gene IDSed0012982
OrganismSechium edule (Chayote v1)
DescriptionHMA domain-containing protein
Genome locationLG04:31809271..31811333
RNA-Seq ExpressionSed0012982
SyntenySed0012982
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55871.1 hypothetical protein Csa_010412 [Cucumis sativus]2.4e-1975Show/hide
Query:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSKN
        MKQSLLFSENLT P F+ IVINANM CNGCRQRV  ++SKM+EL E T+DVTK QV+VKGN K QSKN
Subjt:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSKN
XP_022154033.1 uncharacterized protein LOC111021388 isoform X1 [Momordica charantia]1.7e-2082.09Show/hide
Query:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
        MKQSLLF ENLT P FQ IVINANMGCN CRQRV  LLSKM+EL+E T+DVTKNQVVVKGN KFQSK
Subjt:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
XP_022965234.1 uncharacterized protein LOC111465148 isoform X1 [Cucurbita maxima]2.9e-2080.6Show/hide
Query:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
        M+QSLLFSE+LT PSFQ IVINANM CNGCRQRV  LLSK++ELVEFT+DVTK QVVVKGN KFQ K
Subjt:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
XP_023553457.1 uncharacterized protein LOC111810871 [Cucurbita pepo subsp. pepo]2.9e-2080.6Show/hide
Query:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
        M+QSLLFSE+LT PSFQ IVINANM CNGCRQRV  LLSK++ELVEFT+DVTK QVVVKGN KFQ K
Subjt:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
XP_038903445.1 copper transport protein ATX1 [Benincasa hispida]1.4e-1976.47Show/hide
Query:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSKN
        M+QSLLFSENLT PSFQ IVINANM C GCRQRV  ++ KM+ELVEFT+DVTK QV+VKGN K QSKN
Subjt:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSKN
TrEMBL top hitse value%identityAlignment
A0A0A0L6W5 HMA domain-containing protein1.2e-1975Show/hide
Query:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSKN
        MKQSLLFSENLT P F+ IVINANM CNGCRQRV  ++SKM+EL E T+DVTK QV+VKGN K QSKN
Subjt:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSKN
A0A6J1DJ58 uncharacterized protein LOC111021388 isoform X18.1e-2182.09Show/hide
Query:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
        MKQSLLF ENLT P FQ IVINANMGCN CRQRV  LLSKM+EL+E T+DVTKNQVVVKGN KFQSK
Subjt:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
A0A6J1DKV3 uncharacterized protein LOC111021388 isoform X23.8e-1879.1Show/hide
Query:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
        MKQSLLF ENLT P    IVINANMGCN CRQRV  LLSKM+EL+E T+DVTKNQVVVKGN KFQSK
Subjt:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
A0A6J1HN60 uncharacterized protein LOC111465148 isoform X26.4e-1877.61Show/hide
Query:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
        M+QSLLFSE+LT PS   IVINANM CNGCRQRV  LLSK++ELVEFT+DVTK QVVVKGN KFQ K
Subjt:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
A0A6J1HQF9 uncharacterized protein LOC111465148 isoform X11.4e-2080.6Show/hide
Query:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
        M+QSLLFSE+LT PSFQ IVINANM CNGCRQRV  LLSK++ELVEFT+DVTK QVVVKGN KFQ K
Subjt:  MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35730.1 Heavy metal transport/detoxification superfamily protein1.7e-1043.55Show/hide
Query:  KQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFK
        +++L+  E L+LPSFQ I INA++GC  C+ RV  ++SKMT + E+ +D+ K  V+ +G+F+
Subjt:  KQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAATCTCTTTTATTTTCAGAGAATCTAACACTCCCATCTTTTCAGGAGATTGTTATAAATGCAAATATGGGCTGCAATGGATGCCGCCAAAGAGTTTTTCACCT
TCTCTCTAAAATGACTGAATTAGTAGAATTTACCTTAGATGTGACAAAAAATCAAGTGGTTGTCAAAGGAAATTTCAAATTTCAAAGCAAGAATAATGGATAA
mRNA sequenceShow/hide mRNA sequence
CTAGAGAGAGAAAGCCAAAAAGTTTGAAACTTTCTCATTTTTTCACCTAACAAAAACCTCCAATTCCATGGCTGCTTAACACAGAGAGGGAAATAGAAGAGAAAAAAAAA
ATATGAAGCAATCTCTTTTATTTTCAGAGAATCTAACACTCCCATCTTTTCAGGAGATTGTTATAAATGCAAATATGGGCTGCAATGGATGCCGCCAAAGAGTTTTTCAC
CTTCTCTCTAAAATGACTGAATTAGTAGAATTTACCTTAGATGTGACAAAAAATCAAGTGGTTGTCAAAGGAAATTTCAAATTTCAAAGCAAGAATAATGGATAATATTC
ATTCCCAAATGACCAAAGTTGTAGTTCTCTAGAATCTCTCTCTCCCTCTTCCATCAAAAGCTTAGCTTAAATGATTAAGATTGCATGAGAAATTATTTTGATTGATTAGA
ATGAAAAATTATTTTGGATAGTTAAAAATTGAGGTTGTACTAATAATTCGTTTGGATGTGAATTTTATAGAGAAGTTATGCACGTT
Protein sequenceShow/hide protein sequence
MKQSLLFSENLTLPSFQEIVINANMGCNGCRQRVFHLLSKMTELVEFTLDVTKNQVVVKGNFKFQSKNNG