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Sed0012991 (gene) of Chayote v1 genome

Gene IDSed0012991
OrganismSechium edule (Chayote v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 13
Genome locationLG08:1977655..1979293
RNA-Seq ExpressionSed0012991
SyntenySed0012991
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039618 - CLAVATA3/ESR (CLE)-related protein 9/10/11/12/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC28057.1 hypothetical protein L484_022293 [Morus notabilis]1.3e-1042.98Show/hide
Query:  MPLSLCKSISLLILLSCFAMFFH---GVSLHHT------------IPKNPSFS-PSRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRH-----GDRE
        M + L    SL++ LS F +FFH     S +H             +P+   +S  + + +  K +FT FL H H   HHHRHHHH H+H       G  E
Subjt:  MPLSLCKSISLLILLSCFAMFFH---GVSLHHT------------IPKNPSFS-PSRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRH-----GDRE

Query:  IDPGYGEEKRLVPTGPNPLHH
        IDP YG EKRLVPTGPNPLHH
Subjt:  IDPGYGEEKRLVPTGPNPLHH

KAF7850258.1 hypothetical protein BT93_L5670 [Corymbia citriodora subsp. variegata]2.9e-1046.6Show/hide
Query:  PLSLCKSISLLILLSCFAMFFHGVSLHHTIPKNPSFSPSRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPG----YGEEKRLVPTGPNP
        P  + K++  L LLS F +FFHG     + PKN     +R+ +  K+DFT FL H  R  HHH H H    H+ G   + PG    YG EKRLVPTGPNP
Subjt:  PLSLCKSISLLILLSCFAMFFHGVSLHHTIPKNPSFSPSRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPG----YGEEKRLVPTGPNP

Query:  LHH
        LHH
Subjt:  LHH

KYP55648.1 hypothetical protein KK1_001870 [Cajanus cajan]3.1e-1252Show/hide
Query:  ISLLILLSCFAMFFHG----VSLHHTIPKNPSFSPSRKVM---PGKFDFTAFLEHLHRSNHHH-RHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH
        +S ++ L  F++ FHG     S +H    + + SP+RK++   PG FDFT FL H HR +HHH RHHH SH  +    EIDP YG EKRLVPTGPNPLHH
Subjt:  ISLLILLSCFAMFFHG----VSLHHTIPKNPSFSPSRKVM---PGKFDFTAFLEHLHRSNHHH-RHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH

THG07355.1 hypothetical protein TEA_025860 [Camellia sinensis var. sinensis]1.0e-1047.96Show/hide
Query:  LLILLSCFAMFFHGV-----SLHH--TIPKNPSFSP-SRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH
        +++ LS F + FH +      ++H  TIP      P SRK +  KFDFT FL+H     HHH HH H H H   + E+DP YG EKR VPTGPNPLHH
Subjt:  LLILLSCFAMFFHGV-----SLHH--TIPKNPSFSP-SRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH

XP_007155150.1 hypothetical protein PHAVU_003G177600g [Phaseolus vulgaris]2.9e-1047.62Show/hide
Query:  ISLLILLSCFAMFFHGVSLHHTIPKNP---SFSPSRKVM---PGKFDFTAFLEHLHRSNHHHRHHHHSHRHRH-------GDREIDPGYGEEKRLVPTGP
        +S ++ L  F++ FHG S  ++   N    S S +RK++   PG FDFT FL H    + HH+H HH  RHRH          EIDP YG EKRLVPTGP
Subjt:  ISLLILLSCFAMFFHGVSLHHTIPKNP---SFSPSRKVM---PGKFDFTAFLEHLHRSNHHHRHHHHSHRHRH-------GDREIDPGYGEEKRLVPTGP

Query:  NPLHH
        NPLHH
Subjt:  NPLHH

TrEMBL top hitse value%identityAlignment
A0A151SLI2 Uncharacterized protein1.5e-1252Show/hide
Query:  ISLLILLSCFAMFFHG----VSLHHTIPKNPSFSPSRKVM---PGKFDFTAFLEHLHRSNHHH-RHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH
        +S ++ L  F++ FHG     S +H    + + SP+RK++   PG FDFT FL H HR +HHH RHHH SH  +    EIDP YG EKRLVPTGPNPLHH
Subjt:  ISLLILLSCFAMFFHG----VSLHHTIPKNPSFSPSRKVM---PGKFDFTAFLEHLHRSNHHH-RHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH

A0A4S4DWZ0 Uncharacterized protein4.9e-1147.96Show/hide
Query:  LLILLSCFAMFFHGV-----SLHH--TIPKNPSFSP-SRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH
        +++ LS F + FH +      ++H  TIP      P SRK +  KFDFT FL+H     HHH HH H H H   + E+DP YG EKR VPTGPNPLHH
Subjt:  LLILLSCFAMFFHGV-----SLHH--TIPKNPSFSP-SRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH

A0A6A4Q706 Uncharacterized protein1.9e-1045.19Show/hide
Query:  ISLLILLSCFAMFFHG-----VSLHHTIPKNPSFSPSRKVMPGKFDFTAFLEHLHRSN--HHHRHHHHSHRH-----RHGDREIDPGYGEEKRLVPTGPN
        +S ++    F + FHG      ++ +T   N     SRK++   FDFT FL H H  +  HHHRHHHH+  H          EIDP YG EKRLVPTGPN
Subjt:  ISLLILLSCFAMFFHG-----VSLHHTIPKNPSFSPSRKVMPGKFDFTAFLEHLHRSN--HHHRHHHHSHRH-----RHGDREIDPGYGEEKRLVPTGPN

Query:  PLHH
        PLHH
Subjt:  PLHH

V7CAI9 Uncharacterized protein1.4e-1047.62Show/hide
Query:  ISLLILLSCFAMFFHGVSLHHTIPKNP---SFSPSRKVM---PGKFDFTAFLEHLHRSNHHHRHHHHSHRHRH-------GDREIDPGYGEEKRLVPTGP
        +S ++ L  F++ FHG S  ++   N    S S +RK++   PG FDFT FL H    + HH+H HH  RHRH          EIDP YG EKRLVPTGP
Subjt:  ISLLILLSCFAMFFHGVSLHHTIPKNP---SFSPSRKVM---PGKFDFTAFLEHLHRSNHHHRHHHHSHRHRH-------GDREIDPGYGEEKRLVPTGP

Query:  NPLHH
        NPLHH
Subjt:  NPLHH

W9SUW2 Uncharacterized protein6.4e-1142.98Show/hide
Query:  MPLSLCKSISLLILLSCFAMFFH---GVSLHHT------------IPKNPSFS-PSRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRH-----GDRE
        M + L    SL++ LS F +FFH     S +H             +P+   +S  + + +  K +FT FL H H   HHHRHHHH H+H       G  E
Subjt:  MPLSLCKSISLLILLSCFAMFFH---GVSLHHT------------IPKNPSFS-PSRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRH-----GDRE

Query:  IDPGYGEEKRLVPTGPNPLHH
        IDP YG EKRLVPTGPNPLHH
Subjt:  IDPGYGEEKRLVPTGPNPLHH

SwissProt top hitse value%identityAlignment
A2X462 Protein FON2 SPARE11.3e-0534.71Show/hide
Query:  LLILLSCFAMFFHG--------VSLHHTIPKNPSFS---PSRKVMPGKFDF-----TAFLEHLHRSNHHHRHHHHSHRHRHGDR---------------E
        LL+ L+     FHG            + + ++P+ +   P+RK++     F      + L    R +HHHRHH H H HR  DR               E
Subjt:  LLILLSCFAMFFHG--------VSLHHTIPKNPSFS---PSRKVMPGKFDF-----TAFLEHLHRSNHHHRHHHHSHRHRHGDR---------------E

Query:  IDPGYGEEKRLVPTGPNPLHH
        +DP +G +KRLVPTGPNPLHH
Subjt:  IDPGYGEEKRLVPTGPNPLHH

Q29PU4 CLAVATA3/ESR (CLE)-related protein 124.1e-0755.74Show/hide
Query:  SRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH
        SRKV+  +FDFT F      S  + RH+H S     GD EIDP YG EKR VP+GPNPLHH
Subjt:  SRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH

Q6NMF0 CLAVATA3/ESR (CLE)-related protein 132.4e-0752.31Show/hide
Query:  FSPSRKVMPGK-FDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH
        + P R+ +  K FDFT FL+ L RSNH             G  EIDP YG EKRLVP+GPNPLHH
Subjt:  FSPSRKVMPGK-FDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH

Q6Z6T2 Inactive protein FON2 SPARE11.0e-0542.68Show/hide
Query:  PSRKVMPGKFDF-----TAFLEHLHRSNHHHRHHHHSHRHRHGDR---------------EIDPGYGEEKRLVPTGPNPLHH
        P+RK++     F      + L    R +HHHRHH H H HR  DR               E+DP +G +KRLVPTGPNPLHH
Subjt:  PSRKVMPGKFDF-----TAFLEHLHRSNHHHRHHHHSHRHRHGDR---------------EIDPGYGEEKRLVPTGPNPLHH

Arabidopsis top hitse value%identityAlignment
AT1G26600.1 CLAVATA3/ESR-RELATED 92.6e-0477.27Show/hide
Query:  EIDPGYGEEKRLVPTGPNPLHH
        EIDP YG +KRLVP+GPNPLH+
Subjt:  EIDPGYGEEKRLVPTGPNPLHH

AT1G68795.1 CLAVATA3/ESR-RELATED 122.9e-0855.74Show/hide
Query:  SRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH
        SRKV+  +FDFT F      S  + RH+H S     GD EIDP YG EKR VP+GPNPLHH
Subjt:  SRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH

AT1G69320.1 CLAVATA3/ESR-RELATED 109.8e-0477.27Show/hide
Query:  EIDPGYGEEKRLVPTGPNPLHH
        EID  YG EKRLVP+GPNPLH+
Subjt:  EIDPGYGEEKRLVPTGPNPLHH

AT1G73965.1 CLAVATA3/ESR-RELATED 131.7e-0852.31Show/hide
Query:  FSPSRKVMPGK-FDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH
        + P R+ +  K FDFT FL+ L RSNH             G  EIDP YG EKRLVP+GPNPLHH
Subjt:  FSPSRKVMPGK-FDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTAAGCCTTTGCAAATCCATTTCTCTTCTCATCCTTCTCTCTTGCTTTGCCATGTTCTTTCATGGGGTTTCTCTTCATCATACCATTCCAAAAAACCCCTCCTT
TTCTCCTAGTAGAAAGGTCATGCCTGGCAAATTCGATTTCACCGCCTTTCTCGAGCATCTCCATCGATCGAATCATCACCACCGCCACCATCACCACAGCCACCGCCACC
GCCATGGGGATCGGGAGATCGATCCCGGGTATGGCGAAGAAAAACGACTTGTCCCAACTGGTCCAAATCCTTTGCACCATTGA
mRNA sequenceShow/hide mRNA sequence
AAATTCTCAAAACTTTCAAAATTAAAACTCCCAAAAAACCCCTTTTCATAATCCTCTTTTTTTCTCTTCCAATTCCATGCAGCCCTTAATTCCCTTTCCATTACATTATT
TCTCTCCCTCTCCTAAACCAATTTTCCAATCATTATGCCTTTAAGCCTTTGCAAATCCATTTCTCTTCTCATCCTTCTCTCTTGCTTTGCCATGTTCTTTCATGGGGTTT
CTCTTCATCATACCATTCCAAAAAACCCCTCCTTTTCTCCTAGTAGAAAGGTCATGCCTGGCAAATTCGATTTCACCGCCTTTCTCGAGCATCTCCATCGATCGAATCAT
CACCACCGCCACCATCACCACAGCCACCGCCACCGCCATGGGGATCGGGAGATCGATCCCGGGTATGGCGAAGAAAAACGACTTGTCCCAACTGGTCCAAATCCTTTGCA
CCATTGAGATTGAGAGAGTGGGAGAAGGGAGAACAACAAACCTTACATAGGAGGCATAACTACTCTCAAATAATATGAGAGCCAAATACCGATTTTCGAGCTCGAACTCG
TGATGGTGGAGTTGAAATGGATTAACACCAGACAAGATAACCAACTGCTCTGTTGGCTTGATACCATTCTCAAGTGTTCCTTCATTCTTTTTTAGTTCAATTAAATAGTG
AGATTTGAACTCATGCTCTGTTAATACATACTTAAATCATTGAATTATTATTTTTGTTGGTAATGTTCTTGATGTTAATAACCAAGATTTTTACCTATTTTTTATTACCA
TACTCTTAGCAAGGATCACATTG
Protein sequenceShow/hide protein sequence
MPLSLCKSISLLILLSCFAMFFHGVSLHHTIPKNPSFSPSRKVMPGKFDFTAFLEHLHRSNHHHRHHHHSHRHRHGDREIDPGYGEEKRLVPTGPNPLHH