CuGenDBv2

Gene ID	Sed0013000
Organism	Sechium edule (Chayote v1)
Description	protein PALE CRESS, chloroplastic
Genome location	LG06:62364..67482
RNA-Seq Expression	Sed0013000
Synteny	Sed0013000
Gene Ontology terms	GO:0009658 - chloroplast organization (biological process) GO:0009965 - leaf morphogenesis (biological process) GO:0010239 - chloroplast mRNA processing (biological process) GO:0042254 - ribosome biogenesis (biological process) GO:0071482 - cellular response to light stimulus (biological process) GO:0009501 - amyloplast (cellular component) GO:0009509 - chromoplast (cellular component) GO:0009513 - etioplast (cellular component) GO:0009537 - proplastid (cellular component) GO:0042644 - chloroplast nucleoid (cellular component) GO:0019843 - rRNA binding (molecular function) GO:0043621 - protein self-association (molecular function)
InterPro domains	IPR034563 - Protein PALE CRESS

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022159473.1 protein PALE CRESS, chloroplastic [Momordica charantia]

1.3e-144

88.57

Show/hide

Query:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
        MEA+VLWL+CPP+PPLP A  T  KLSTSHFSK HS   VLR SLSKEE LIDGLPKE+YDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
Subjt:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL

Query:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE
        KGFPEEDV KARKLV+SFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREA+  MRLLNELLNMYDGFD+
Subjt:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE

Query:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI
        EGWLK+CRKRMVDTFPREDPFSILVP GLDIDKHQGPLRPSLE   ADNTLLRVDFVREVDELLQEVR D+S+   AN  GFD ESVASRLKQQEKQRTI
Subjt:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI

Query:  RLVEALLDLAINLKW
        RLVEALLDL+INLKW
Subjt:  RLVEALLDLAINLKW

XP_022931090.1 protein PALE CRESS, chloroplastic [Cucurbita moschata]

3.5e-142

86.98

Show/hide

Query:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
        M A V WL+C P+PPLP A PT PKLSTS+F K +SS PVLRRSLSKEE LIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
Subjt:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL

Query:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE
        KGFPEEDV KARKLV+SFIRA EEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREAS  MRLLN+LLNMYD F++
Subjt:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE

Query:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI
        EGWLK+CRK M+DTFPREDPFSILVPAG DIDKHQG LRPSLEVE ADNTLLRVDFVREVDELLQEVR DQS+   AN DGFDAESVASRLKQQEKQRT+
Subjt:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI

Query:  RLVEALLDLAINLKW
        RLVE LL+LA+NL+W
Subjt:  RLVEALLDLAINLKW

XP_022995861.1 protein PALE CRESS, chloroplastic [Cucurbita maxima]

1.1e-143

87.3

Show/hide

Query:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
        M A VLWL+C P+PPLP A PT PKLSTS+F K +SS PVLRRSLSKEE LIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
Subjt:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL

Query:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE
        KGFPEEDVRKARKLV+SFIRA EEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREAS  MRLLN+LLNMYD F++
Subjt:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE

Query:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI
        EGWLK+CRKRM+DTFPREDPFSILVPAG DIDKHQG LRPSLEVE ADNTLLRVDFVREVDELLQEVR DQS+   AN DGFDAESVASRLK QEKQR++
Subjt:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI

Query:  RLVEALLDLAINLKW
        RLVE LL+LA+NL+W
Subjt:  RLVEALLDLAINLKW

XP_023534033.1 protein PALE CRESS, chloroplastic [Cucurbita pepo subsp. pepo]

7.0e-143

86.98

Show/hide

Query:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
        M A VLWL+C P+PPLP A PT PKLSTS+F K +SS PVLRRSLSKEE LIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
Subjt:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL

Query:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE
        KGFPEEDV KARKLV+SFIRA EEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREAS  MRLLN+LLNMYD F++
Subjt:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE

Query:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI
        EGWLK+CRKRM+DTFPREDPFSILVPAG DIDKHQG LRPSL+VE ADNTLLRVDFVREVDELLQEVR DQS+   AN DGFDAESVASRLK QEKQRT+
Subjt:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI

Query:  RLVEALLDLAINLKW
        RLVE LL+LA+NL+W
Subjt:  RLVEALLDLAINLKW

XP_038888470.1 protein PALE CRESS, chloroplastic isoform X1 [Benincasa hispida]

7.8e-142

87.94

Show/hide

Query:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
        MEA VL L+  P+PPL       PKL TS F KH+SS PVLRRSLSKEE LIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEE+RKVEEYREIGMRL
Subjt:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL

Query:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE
        KGFPEEDVRKARKLV+SFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDAIRSLDLLYRRVETEILKREA+  MRLLNELLNMYDGFD+
Subjt:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE

Query:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI
        EGWLK CRKRMVDTFPREDPFSILVPAG DIDKHQGPLRPSLEVE ADNTLLRVDFVREVDELLQEV  DQS+    N DGFDAESVASRLKQQEKQRTI
Subjt:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI

Query:  RLVEALLDLAINLKW
        RLVEALLDLA+NLKW
Subjt:  RLVEALLDLAINLKW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJC6 Uncharacterized protein

2.4e-133

85.08

Show/hide

Query:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
        MEA +L L+   LPPL    P  PKL TS  S   SS  VLRRSLSKEE LIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEE+RKVEEYREIGMRL
Subjt:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL

Query:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE
        K FPEEDVRKARKLV+SFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKREA+  MRLLNELLNMYDGFD 
Subjt:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE

Query:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI
        EGWLK CRK MVDTFPREDPFSILVPAG DIDKHQGPLRPSL VE +DNTLLRVDFVREVDELLQEV   QSD    N D FDAESVASRLKQQEKQRTI
Subjt:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI

Query:  RLVEALLDLAINLKW
        RLVEALLDLA+NLKW
Subjt:  RLVEALLDLAINLKW

A0A5D3E2R9 Protein PALE CRESS

3.2e-133

84.76

Show/hide

Query:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
        MEA VL L+   LP L    P   KL TS  SKH+SS  VLRRS SKEE LIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEE+RKV+EY EIGMRL
Subjt:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL

Query:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE
        K FPEEDVRKARKLV+SFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKREA+  MRLLNELLNMYDGFD 
Subjt:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE

Query:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSDA---NPDGFDAESVASRLKQQEKQRTI
        EGWLK CRK MVDTFPREDPFSILVPAG DIDKHQGPLRPSL VE ADNTLLRVDFVREVDELLQEV   QSD    N D FDAESVASRLKQQEKQRTI
Subjt:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSDA---NPDGFDAESVASRLKQQEKQRTI

Query:  RLVEALLDLAINLKW
        RLVEALLDLA+NLKW
Subjt:  RLVEALLDLAINLKW

A0A6J1DYX0 protein PALE CRESS, chloroplastic

6.2e-145

88.57

Show/hide

Query:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
        MEA+VLWL+CPP+PPLP A  T  KLSTSHFSK HS   VLR SLSKEE LIDGLPKE+YDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
Subjt:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL

Query:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE
        KGFPEEDV KARKLV+SFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREA+  MRLLNELLNMYDGFD+
Subjt:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE

Query:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI
        EGWLK+CRKRMVDTFPREDPFSILVP GLDIDKHQGPLRPSLE   ADNTLLRVDFVREVDELLQEVR D+S+   AN  GFD ESVASRLKQQEKQRTI
Subjt:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI

Query:  RLVEALLDLAINLKW
        RLVEALLDL+INLKW
Subjt:  RLVEALLDLAINLKW

A0A6J1EYI4 protein PALE CRESS, chloroplastic

1.7e-142

86.98

Show/hide

Query:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
        M A V WL+C P+PPLP A PT PKLSTS+F K +SS PVLRRSLSKEE LIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
Subjt:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL

Query:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE
        KGFPEEDV KARKLV+SFIRA EEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREAS  MRLLN+LLNMYD F++
Subjt:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE

Query:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI
        EGWLK+CRK M+DTFPREDPFSILVPAG DIDKHQG LRPSLEVE ADNTLLRVDFVREVDELLQEVR DQS+   AN DGFDAESVASRLKQQEKQRT+
Subjt:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI

Query:  RLVEALLDLAINLKW
        RLVE LL+LA+NL+W
Subjt:  RLVEALLDLAINLKW

A0A6J1K329 protein PALE CRESS, chloroplastic

5.2e-144

87.3

Show/hide

Query:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
        M A VLWL+C P+PPLP A PT PKLSTS+F K +SS PVLRRSLSKEE LIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL
Subjt:  MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRL

Query:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE
        KGFPEEDVRKARKLV+SFIRA EEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREAS  MRLLN+LLNMYD F++
Subjt:  KGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDE

Query:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI
        EGWLK+CRKRM+DTFPREDPFSILVPAG DIDKHQG LRPSLEVE ADNTLLRVDFVREVDELLQEVR DQS+   AN DGFDAESVASRLK QEKQR++
Subjt:  EGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSD---ANPDGFDAESVASRLKQQEKQRTI

Query:  RLVEALLDLAINLKW
        RLVE LL+LA+NL+W
Subjt:  RLVEALLDLAINLKW

SwissProt top hits

e value

%identity

Alignment

Q39089 Protein PALE CRESS, chloroplastic

3.4e-108

68.14

Show/hide

Query:  MEAHVLWLKC-PPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRR-SLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGM
        M A  L L C  PL   P       KL+T       S+A   RR S + +E L++G+P EYYDDEWQARQREKTKEL R ++EE+EEEERK+EEYREIG 
Subjt:  MEAHVLWLKC-PPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRR-SLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGM

Query:  RLKGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGF
        RLK FPE+D+RKARKLV+SFIRAAEEVEE+IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR+AS  M+LLN+LLNM+DGF
Subjt:  RLKGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGF

Query:  DEEGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQ---SDANPDGFDAESVASRLKQQEKQR
        +++ WLK+CRKRM +TFPREDPFSIL+P G DID HQG LRP +E E  DNTLLRVDFVREVD LLQEVR+++   + +  +G D E++A + KQQEKQR
Subjt:  DEEGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQ---SDANPDGFDAESVASRLKQQEKQR

Query:  TIRLVEALLDLAINLKW
        TIR +EA+LDLA+NLKW
Subjt:  TIRLVEALLDLAINLKW

Arabidopsis top hits

e value

%identity

Alignment

AT2G48120.1 pale cress protein (PAC)

2.4e-109

68.14

Show/hide

Query:  MEAHVLWLKC-PPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRR-SLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGM
        M A  L L C  PL   P       KL+T       S+A   RR S + +E L++G+P EYYDDEWQARQREKTKEL R ++EE+EEEERK+EEYREIG 
Subjt:  MEAHVLWLKC-PPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRR-SLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGM

Query:  RLKGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGF
        RLK FPE+D+RKARKLV+SFIRAAEEVEE+IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR+AS  M+LLN+LLNM+DGF
Subjt:  RLKGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGF

Query:  DEEGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQ---SDANPDGFDAESVASRLKQQEKQR
        +++ WLK+CRKRM +TFPREDPFSIL+P G DID HQG LRP +E E  DNTLLRVDFVREVD LLQEVR+++   + +  +G D E++A + KQQEKQR
Subjt:  DEEGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQ---SDANPDGFDAESVASRLKQQEKQR

Query:  TIRLVEALLDLAINLKW
        TIR +EA+LDLA+NLKW
Subjt:  TIRLVEALLDLAINLKW

AT2G48120.2 pale cress protein (PAC)

8.9e-104

66.25

Show/hide

Query:  MEAHVLWLKC-PPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRR-SLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGM
        M A  L L C  PL   P       KL+T       S+A   RR S + +E L++G+P EYYDD      REKTKEL R ++EE+EEEERK+EEYREIG 
Subjt:  MEAHVLWLKC-PPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRR-SLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGM

Query:  RLKGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGF
        RLK FPE+D+RKARKLV+SFIRAAEEVEE+IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR+AS  M+LLN+LLNM+DGF
Subjt:  RLKGFPEEDVRKARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGF

Query:  DEEGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQ---SDANPDGFDAESVASRLKQQEKQR
        +++ WLK+CRKRM +TFPREDPFSIL+P G DID HQG LRP +E E  DNTLLRVDFVREVD LLQEVR+++   + +  +G D E++A + KQQEKQR
Subjt:  DEEGWLKECRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQ---SDANPDGFDAESVASRLKQQEKQR

Query:  TIRLVEALLDLAINLKW
        TIR +EA+LDLA+NLKW
Subjt:  TIRLVEALLDLAINLKW

Sequences

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CDS sequence

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ATGGAGGCACATGTGCTGTGGCTAAAATGCCCACCACTTCCACCATTACCATTTGCTTTCCCAACCTTCCCAAAGCTTTCGACGTCTCATTTCTCTAAACACCATTCATC
GGCTCCTGTTTTGAGGAGAAGCTTGAGCAAGGAAGAGTCGCTTATTGATGGGCTTCCCAAAGAGTATTATGATGATGAATGGCAAGCCCGACAAAGAGAAAAAACCAAGG
AGTTACATAGAAGGCGCCAAGAGGAAGATGAAGAAGAGGAAAGAAAGGTAGAAGAATATCGTGAGATTGGAATGCGTTTGAAAGGATTTCCTGAAGAAGATGTCAGAAAA
GCTAGAAAACTAGTTACAAGCTTTATTAGAGCTGCTGAAGAAGTTGAAGAGAAAATTGAGGAAGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTACTAGTCATATG
GAATCGGCTTGATTTAGCACGTCGTGATGATGAAAAGGATGCAATTAGAAGTCTAGATCTGCTATATCGAAGGGTTGAGACTGAAATTCTGAAACGAGAGGCTAGTGGTG
GCATGAGACTGCTTAACGAACTTCTGAACATGTACGACGGGTTCGATGAAGAAGGATGGCTAAAAGAGTGCAGAAAGCGCATGGTTGATACCTTTCCGCGGGAGGATCCA
TTCAGCATTCTCGTTCCAGCTGGATTAGACATCGATAAGCATCAAGGGCCGTTGCGACCATCTCTAGAAGTCGAAGCTGCTGATAATACCCTGTTGAGAGTAGACTTTGT
CAGAGAGGTTGATGAACTGCTACAAGAAGTTCGAGTCGATCAGAGTGACGCAAATCCAGATGGTTTTGATGCGGAATCGGTTGCAAGTAGGTTGAAACAACAGGAGAAAC
AACGGACAATTAGGTTGGTAGAAGCGCTGCTAGATTTGGCTATTAATTTAAAGTGGTACTAG

mRNA sequence

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TGAAATTATGCTTAAAAAACTACCCTAGGAATTTATTAATAAAAATTCACCAAAAAAACTAATAGTAATGTAGCTCATAAAATAAAATAAAAGGGTATCACAAATGGGAA
GAATCGCTGGTCGAATCTTCTCCAATTAGGGTTCATATTACTTGCATTGGTCTGTGAGAAGTGTAAGCCTCTGTTTCCCCTCTTCCATTGCTGCATGCAATCGAGAAATG
ATCCAATTCTAGCAACAAGATGTTCCTCCAATTTGTGTGACCGGACCGGGTTCTTATTCTTCATCACATCCAGGCGGCGAGATTTGGTAGCAACTTTTCTTTGATTTCTA
CTTCATTTTTGGATTTGGTTTAGGTGTGGAGAATATAATGGAGGCACATGTGCTGTGGCTAAAATGCCCACCACTTCCACCATTACCATTTGCTTTCCCAACCTTCCCAA
AGCTTTCGACGTCTCATTTCTCTAAACACCATTCATCGGCTCCTGTTTTGAGGAGAAGCTTGAGCAAGGAAGAGTCGCTTATTGATGGGCTTCCCAAAGAGTATTATGAT
GATGAATGGCAAGCCCGACAAAGAGAAAAAACCAAGGAGTTACATAGAAGGCGCCAAGAGGAAGATGAAGAAGAGGAAAGAAAGGTAGAAGAATATCGTGAGATTGGAAT
GCGTTTGAAAGGATTTCCTGAAGAAGATGTCAGAAAAGCTAGAAAACTAGTTACAAGCTTTATTAGAGCTGCTGAAGAAGTTGAAGAGAAAATTGAGGAAGCTGCTGAGA
AAGGGGAACTAACAGAGCTTGTTCTACTAGTCATATGGAATCGGCTTGATTTAGCACGTCGTGATGATGAAAAGGATGCAATTAGAAGTCTAGATCTGCTATATCGAAGG
GTTGAGACTGAAATTCTGAAACGAGAGGCTAGTGGTGGCATGAGACTGCTTAACGAACTTCTGAACATGTACGACGGGTTCGATGAAGAAGGATGGCTAAAAGAGTGCAG
AAAGCGCATGGTTGATACCTTTCCGCGGGAGGATCCATTCAGCATTCTCGTTCCAGCTGGATTAGACATCGATAAGCATCAAGGGCCGTTGCGACCATCTCTAGAAGTCG
AAGCTGCTGATAATACCCTGTTGAGAGTAGACTTTGTCAGAGAGGTTGATGAACTGCTACAAGAAGTTCGAGTCGATCAGAGTGACGCAAATCCAGATGGTTTTGATGCG
GAATCGGTTGCAAGTAGGTTGAAACAACAGGAGAAACAACGGACAATTAGGTTGGTAGAAGCGCTGCTAGATTTGGCTATTAATTTAAAGTGGTACTAGTAGCGTTGGTT
GCCTTGCGAATGTAATGTAGAAACAGAGAAACATTTTAGTTAGGATACCAATATTCAAGTATCCATTTTAACAACCTTTTTCTGTTGTAGATATTAAAATAAGTAGCTCT
AATTGTAAAATTAGCAAAACTCTTAAATATTTGTAATTGTGGCAAATTTTAAGTAAAATATAAGCTAATAGTCCGACTTTGTAA

Protein sequence

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MEAHVLWLKCPPLPPLPFAFPTFPKLSTSHFSKHHSSAPVLRRSLSKEESLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVRK
ARKLVTSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASGGMRLLNELLNMYDGFDEEGWLKECRKRMVDTFPREDP
FSILVPAGLDIDKHQGPLRPSLEVEAADNTLLRVDFVREVDELLQEVRVDQSDANPDGFDAESVASRLKQQEKQRTIRLVEALLDLAINLKWY

Sed0013000 (gene) of Chayote v1 genome