CuGenDBv2

Gene ID	Sed0013049
Organism	Sechium edule (Chayote v1)
Description	protein MODIFIER OF SNC1 11-like
Genome location	LG14:4478768..4482352
RNA-Seq Expression	Sed0013049
Synteny	Sed0013049
Gene Ontology terms	GO:0016973 - poly(A)+ mRNA export from nucleus (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008447291.1 PREDICTED: protein MODIFIER OF SNC1 11-like [Cucumis melo]

2.0e-82

86.27

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Query:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR
        MATVA AGLNDISNSKNPLGENP++TL+P +SSSAQ PASVPPS TDGGSSK+ DESK SGK S   +GA  SDVQRKMRRAERFGISVQLSE+EKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD
        AERFGMG TTNGLGASNK+EEVKRKARAERFG+SASVTTDDEAKKKARLARFSSTSKPD QEEEKRKARA+RFSNPT NSVTQVDGKGNVETIAD++GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD

Query:  GGGA
        GGGA
Subjt:  GGGA

XP_022949856.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata]

3.4e-82

85.78

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Query:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR
        MATVASAG+NDISNSKNPLGENP++TLDP +SSSAQ P SVP S TDGGSSK+ DESKGS K SVEG+G   SDVQRKMRRAERFGISVQLSE+EKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD
        AERFGMG TTNGLGASNKSEEVKRKARAERFG+ ASV TDDEAKKKARL RFSSTSKPD+QEEEKRKARA+RFSNPTSNS+TQVDGKGN+ETIADI+GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD

Query:  GGGA
        GGGA
Subjt:  GGGA

XP_022977777.1 protein MODIFIER OF SNC1 11-like [Cucurbita maxima]

2.9e-81

85.29

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Query:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR
        MATVASAG+NDISNSKN LGENP++TLDP +SSSAQ P SVP S TDGGSSK+ DESKGS K SVEG+G   SDVQRKMRRAERFGISVQLSE+EKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD
        AERFGMG TTNGLGASNKSEEVKRKARAERFG+ ASV TDDEAKKKARL RFSSTSKPD+QEEEKRKARA+RFSNPTSNS+TQVDGKGN+ETIADI+GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD

Query:  GGGA
        GGGA
Subjt:  GGGA

XP_031740008.1 protein MODIFIER OF SNC1 11 [Cucumis sativus]

2.2e-81

85.29

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Query:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR
        MATVA AGLNDISNSKNPLGENP++TL+  +SSSAQ PASVPPS TDGGSSK+ DESK +GK S E +GA  SDVQRKMRRAERFGISVQLSE+EKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD
        AERFGMG TTNGLGASNK+EEVKRKARAERFG+SASVTTDDEAKKKARLARFSSTSKPD QEEEKRKARA+RFSNPT NS+TQVDGKGNVETIAD++GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD

Query:  GGGA
        GGGA
Subjt:  GGGA

XP_038882639.1 protein MODIFIER OF SNC1 11 [Benincasa hispida]

7.4e-85

88.24

Show/hide

Query:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR
        MATVASAGLNDISNSK+PLGENP++TLDP +SSSAQ PASVP S TDGGSSKD DESKGSGKASVEG+GA  SDVQRKMRRAERFGISVQLSE+EKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD
        AERFGMG  TNGLGASNK+EEVKRKARAERFG+SASVTTDDEAKKKARLARFSSTSKPD QEEEKRKARA+RFSNPTSNS TQ+DGKGNVETIAD++GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD

Query:  GGGA
        GGGA
Subjt:  GGGA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L0R4 Tho1_MOS11_C domain-containing protein

1.1e-81

85.29

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Query:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR
        MATVA AGLNDISNSKNPLGENP++TL+  +SSSAQ PASVPPS TDGGSSK+ DESK +GK S E +GA  SDVQRKMRRAERFGISVQLSE+EKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD
        AERFGMG TTNGLGASNK+EEVKRKARAERFG+SASVTTDDEAKKKARLARFSSTSKPD QEEEKRKARA+RFSNPT NS+TQVDGKGNVETIAD++GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD

Query:  GGGA
        GGGA
Subjt:  GGGA

A0A1S3BHQ8 protein MODIFIER OF SNC1 11-like

9.8e-83

86.27

Show/hide

Query:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR
        MATVA AGLNDISNSKNPLGENP++TL+P +SSSAQ PASVPPS TDGGSSK+ DESK SGK S   +GA  SDVQRKMRRAERFGISVQLSE+EKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD
        AERFGMG TTNGLGASNK+EEVKRKARAERFG+SASVTTDDEAKKKARLARFSSTSKPD QEEEKRKARA+RFSNPT NSVTQVDGKGNVETIAD++GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD

Query:  GGGA
        GGGA
Subjt:  GGGA

A0A5A7TZD8 Protein MODIFIER OF SNC1 11-like

9.8e-83

86.27

Show/hide

Query:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR
        MATVA AGLNDISNSKNPLGENP++TL+P +SSSAQ PASVPPS TDGGSSK+ DESK SGK S   +GA  SDVQRKMRRAERFGISVQLSE+EKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD
        AERFGMG TTNGLGASNK+EEVKRKARAERFG+SASVTTDDEAKKKARLARFSSTSKPD QEEEKRKARA+RFSNPT NSVTQVDGKGNVETIAD++GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD

Query:  GGGA
        GGGA
Subjt:  GGGA

A0A6J1GD78 protein MODIFIER OF SNC1 11-like

1.7e-82

85.78

Show/hide

Query:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR
        MATVASAG+NDISNSKNPLGENP++TLDP +SSSAQ P SVP S TDGGSSK+ DESKGS K SVEG+G   SDVQRKMRRAERFGISVQLSE+EKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD
        AERFGMG TTNGLGASNKSEEVKRKARAERFG+ ASV TDDEAKKKARL RFSSTSKPD+QEEEKRKARA+RFSNPTSNS+TQVDGKGN+ETIADI+GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD

Query:  GGGA
        GGGA
Subjt:  GGGA

A0A6J1IR28 protein MODIFIER OF SNC1 11-like

1.4e-81

85.29

Show/hide

Query:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR
        MATVASAG+NDISNSKN LGENP++TLDP +SSSAQ P SVP S TDGGSSK+ DESKGS K SVEG+G   SDVQRKMRRAERFGISVQLSE+EKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD
        AERFGMG TTNGLGASNKSEEVKRKARAERFG+ ASV TDDEAKKKARL RFSSTSKPD+QEEEKRKARA+RFSNPTSNS+TQVDGKGN+ETIADI+GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKD

Query:  GGGA
        GGGA
Subjt:  GGGA

SwissProt top hits

e value

%identity

Alignment

Q9LZ08 Protein MODIFIER OF SNC1 11

4.7e-26

51.18

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Query:  GENPTETLD---PAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGK-ASVE-GEGASDSDVQRKMRRAERFGISVQLSEKEKRNSRAERFG--MGATTNG
        GENP + +D     +  +  +        +D G  K+E +S G G  A V+ G+ +   D+Q+K+RRAERFG+SV+L+E+EKRNSRAERFG    A  NG
Subjt:  GENPTETLD---PAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGK-ASVE-GEGASDSDVQRKMRRAERFGISVQLSEKEKRNSRAERFG--MGATTNG

Query:  LGASNKSEEVKRKARAERFGV-SASVTTD---DEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTS
           + K+EE+KRKARA+RFGV SA+ TTD   +EAKKKARLARF   +K D+ EE KRKARALRFS   S
Subjt:  LGASNKSEEVKRKARAERFGV-SASVTTD---DEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTS

Arabidopsis top hits

e value

%identity

Alignment

AT5G02770.1 unknown protein

3.4e-27

51.18

Show/hide

Query:  GENPTETLD---PAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGK-ASVE-GEGASDSDVQRKMRRAERFGISVQLSEKEKRNSRAERFG--MGATTNG
        GENP + +D     +  +  +        +D G  K+E +S G G  A V+ G+ +   D+Q+K+RRAERFG+SV+L+E+EKRNSRAERFG    A  NG
Subjt:  GENPTETLD---PAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGK-ASVE-GEGASDSDVQRKMRRAERFGISVQLSEKEKRNSRAERFG--MGATTNG

Query:  LGASNKSEEVKRKARAERFGV-SASVTTD---DEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTS
           + K+EE+KRKARA+RFGV SA+ TTD   +EAKKKARLARF   +K D+ EE KRKARALRFS   S
Subjt:  LGASNKSEEVKRKARAERFGV-SASVTTD---DEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGACGGTAGCATCTGCAGGGCTCAATGACATCAGTAACAGCAAGAATCCGCTTGGAGAAAACCCTACCGAAACCCTAGACCCGGCGGTTTCTTCCTCCGCCCAGGT
TCCGGCCTCCGTTCCGCCGTCGTTGACTGACGGCGGATCTTCAAAGGACGAGGATGAATCCAAGGGCTCCGGTAAGGCTTCCGTTGAAGGGGAAGGTGCGTCGGATTCTG
ATGTTCAGAGGAAAATGCGCCGTGCCGAGCGTTTTGGGATTTCGGTGCAATTGTCTGAGAAAGAAAAGCGTAATTCTCGAGCGGAACGGTTTGGTATGGGTGCCACAACA
AATGGATTGGGAGCATCAAATAAGTCAGAGGAGGTGAAGAGAAAGGCTAGAGCTGAGAGATTTGGAGTTTCTGCATCTGTGACTACTGATGATGAGGCAAAGAAGAAAGC
TCGTCTTGCTAGGTTTTCATCAACATCAAAGCCAGACACCCAGGAGGAAGAAAAGAGGAAAGCAAGGGCACTCAGGTTTTCAAATCCAACATCAAACTCTGTCACACAAG
TGGATGGGAAAGGAAACGTTGAGACGATCGCAGATATTTCAGGCAAGGATGGAGGTGGTGCGTGA

mRNA sequence

Show/hide mRNA sequence

TTACCATACACGATCTGCAATATCTGACCCGATTGAAAATCGAACACAAATCGTTCGCACTCTCTTTCACGCACCGATTCTCTTTGGTTTCGTGGATCGCACTCTCCGAT
TAGGGTTTCAGCTCTCAAATCTGCGTCTCTAATGGCGACGGTAGCATCTGCAGGGCTCAATGACATCAGTAACAGCAAGAATCCGCTTGGAGAAAACCCTACCGAAACCC
TAGACCCGGCGGTTTCTTCCTCCGCCCAGGTTCCGGCCTCCGTTCCGCCGTCGTTGACTGACGGCGGATCTTCAAAGGACGAGGATGAATCCAAGGGCTCCGGTAAGGCT
TCCGTTGAAGGGGAAGGTGCGTCGGATTCTGATGTTCAGAGGAAAATGCGCCGTGCCGAGCGTTTTGGGATTTCGGTGCAATTGTCTGAGAAAGAAAAGCGTAATTCTCG
AGCGGAACGGTTTGGTATGGGTGCCACAACAAATGGATTGGGAGCATCAAATAAGTCAGAGGAGGTGAAGAGAAAGGCTAGAGCTGAGAGATTTGGAGTTTCTGCATCTG
TGACTACTGATGATGAGGCAAAGAAGAAAGCTCGTCTTGCTAGGTTTTCATCAACATCAAAGCCAGACACCCAGGAGGAAGAAAAGAGGAAAGCAAGGGCACTCAGGTTT
TCAAATCCAACATCAAACTCTGTCACACAAGTGGATGGGAAAGGAAACGTTGAGACGATCGCAGATATTTCAGGCAAGGATGGAGGTGGTGCGTGAAAAGAATTCCCTTT
TGATGCCAAGATAGCTTTTGCTTGTAAAGTTTTTTGGTGGTTGAGTATCCTGGTTATGATTCCCCATAATGGCTTCCATACTCTTGTTCTTTTCTTTATATGATTATGTA
GTGCAAAAGTCTTCCATTCGAAGGGCAGATTCAATACTGTGAGGTGCTGTACTAGGTGTTGCTGTGAGATGAGGTTCCCTAGATTCAGTTGTGTCAGGATATTGTTCTTG
GGTTAGGTGTTATAGTAATAGACAATACCTCCATAGGTCAAGCTTATCTTTCAGTTTATCGAGAGTATCAGAAGTTTCGGTATGCCTTAGCCCTCCAATGTTTTGGTTTT
CATCTTCAGTTTATATCTCGTTTGTGCTGACAAGTTGGATGTTCATGATATCATTTGAACGGCAGTGCTAAGTTTCCATGCCAATTGGTAAAATCTGACACAGACTGGTT
TTAAGTTCGCTAATGTAGTATAAGAAAAGTTAACATAACACATCTTGCGTTTCTTTGAGTTAATATTATTAGGTTTTAGTTTACTGACTATAAAGTAGTTTGGTTATTTA
GCTTCTTGTTCCTCTTTGATGGTAGGATCAAATGAATAATTCTCATTCTAAGGAAACTTGCATGCATATCTTTTGACTTTTCTTTTCCAGAGGCAGAGACGGATCAAGCA
ACTGAGCAGCGCTAGCTATTTTTCGATCGTTTACGATTGATGTTTGGTCTCTTTGTATGATGGCAGCACATCTCATCTCATCTCATGGCATCACTTATAATTTTACTTAT
CATGGAAATGACTACATTTTTTAGACGCCTAGTTTTTCTTAACCTACCAGAATGTGCTCTGATTAGAATAGTCATATGTTGAATGTTATTAGAACTAACTGCCGTTCAAA
ATGTTATCATGACCTCCAACTTATGCGAGAATAAACTGAGGATAAACCTTCGGCGGGGGGAGAAAATATCAAGTCGTATTGGGCAAGTGGTTAGAAATTGAATAGGCTAA
GTCTTTGGAGGTATTTGTTGGCTCTTTTAGAGGTATCTGGCTATCTGCCATGTATTGAAGTCTGTAGCTGAGAATGGATTGTAGTCTTTACTCTACCATTAGGTTTCCTC
TAAGTGTTGTTAATTTCTTCTTTTCCTTTATCTTTCTTTTCATAGTTAGTTCACGACTACATGTATTTAGGTTCTTTTGTATTTTGGTTGGATAATGGTATGGAAGGACC
ACGACATTTATACAAGGGAATCGATATTTTGATC

Protein sequence

Show/hide protein sequence

MATVASAGLNDISNSKNPLGENPTETLDPAVSSSAQVPASVPPSLTDGGSSKDEDESKGSGKASVEGEGASDSDVQRKMRRAERFGISVQLSEKEKRNSRAERFGMGATT
NGLGASNKSEEVKRKARAERFGVSASVTTDDEAKKKARLARFSSTSKPDTQEEEKRKARALRFSNPTSNSVTQVDGKGNVETIADISGKDGGGA

Sed0013049 (gene) of Chayote v1 genome