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Sed0013063 (gene) of Chayote v1 genome

Gene IDSed0013063
OrganismSechium edule (Chayote v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG10:5408583..5409657
RNA-Seq ExpressionSed0013063
SyntenySed0013063
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022963149.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]8.9e-5484Show/hide
Query:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA
        MGC+CNNNG    SRILC+T+SFLF LILASTQ+RFMAEGR +SKSGKTVSEDKV+LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK++ M   KNIA
Subjt:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA

Query:  YARDEGSNYKPMSWKCKCGSLIFNP
        YARDE SNYKPMSWKCKCGSLIFNP
Subjt:  YARDEGSNYKPMSWKCKCGSLIFNP

XP_023003266.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita maxima]3.1e-5484.8Show/hide
Query:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA
        MGC+CNNNG     RILC+T+SFLFLLILASTQ+RFMAEGR +SKSGKTVSEDKV+LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK++TM   KNIA
Subjt:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA

Query:  YARDEGSNYKPMSWKCKCGSLIFNP
        YARDE SNYKPMSWKCKCGSLIFNP
Subjt:  YARDEGSNYKPMSWKCKCGSLIFNP

XP_023003267.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita maxima]3.1e-5484.8Show/hide
Query:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA
        MGC+CNNNG     RILC+T+SFLFLLILASTQ+RFMAEGR +SKSGKTVSEDKV+LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK++TM   KNIA
Subjt:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA

Query:  YARDEGSNYKPMSWKCKCGSLIFNP
        YARDE SNYKPMSWKCKCGSLIFNP
Subjt:  YARDEGSNYKPMSWKCKCGSLIFNP

XP_023518504.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo]1.2e-5384Show/hide
Query:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA
        MGC+CNNNG    SRILC+T+SFLF LILASTQ+RFMAEGR + KSGKTVSEDKV+LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK++TM   KNIA
Subjt:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA

Query:  YARDEGSNYKPMSWKCKCGSLIFNP
        YARDE SNYKPMSWKCKCGSLIFNP
Subjt:  YARDEGSNYKPMSWKCKCGSLIFNP

XP_023518506.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo]1.2e-5384Show/hide
Query:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA
        MGC+CNNNG    SRILC+T+SFLF LILASTQ+RFMAEGR + KSGKTVSEDKV+LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK++TM   KNIA
Subjt:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA

Query:  YARDEGSNYKPMSWKCKCGSLIFNP
        YARDE SNYKPMSWKCKCGSLIFNP
Subjt:  YARDEGSNYKPMSWKCKCGSLIFNP

TrEMBL top hitse value%identityAlignment
A0A6J1BSQ3 Epidermal patterning factor-like protein1.4e-4977.17Show/hide
Query:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKK--KN
        M C+CNNNG    SRILC+T+ FLFLLILASTQ+RFMAEGRLV K G+TV E+KV+LRGQIGSRPPKCERRCSWC HCEAIQVP NPQK+A        N
Subjt:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKK--KN

Query:  IAYARDEGSNYKPMSWKCKCGSLIFNP
        +AYARDE SNYKPMSWKCKCGSLIFNP
Subjt:  IAYARDEGSNYKPMSWKCKCGSLIFNP

A0A6J1GDI3 Epidermal patterning factor-like protein1.2e-4876.56Show/hide
Query:  MGCDCNNNG-----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKK--K
        MGC+CNNNG     SRILC+T+SFL LLILASTQ+R  AEGR +S   KTV+EDK +LRGQIGS+PPKCERRCSWC HCEAIQVPANPQK+AT K    K
Subjt:  MGCDCNNNG-----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKK--K

Query:  NIAYARDEGSNYKPMSWKCKCGSLIFNP
        NI YARDE SNYKPMSWKCKCGSLIFNP
Subjt:  NIAYARDEGSNYKPMSWKCKCGSLIFNP

A0A6J1HJ94 Epidermal patterning factor-like protein4.3e-5484Show/hide
Query:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA
        MGC+CNNNG    SRILC+T+SFLF LILASTQ+RFMAEGR +SKSGKTVSEDKV+LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK++ M   KNIA
Subjt:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA

Query:  YARDEGSNYKPMSWKCKCGSLIFNP
        YARDE SNYKPMSWKCKCGSLIFNP
Subjt:  YARDEGSNYKPMSWKCKCGSLIFNP

A0A6J1KLZ1 Epidermal patterning factor-like protein1.5e-5484.8Show/hide
Query:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA
        MGC+CNNNG     RILC+T+SFLFLLILASTQ+RFMAEGR +SKSGKTVSEDKV+LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK++TM   KNIA
Subjt:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA

Query:  YARDEGSNYKPMSWKCKCGSLIFNP
        YARDE SNYKPMSWKCKCGSLIFNP
Subjt:  YARDEGSNYKPMSWKCKCGSLIFNP

A0A6J1KNP8 Epidermal patterning factor-like protein1.5e-5484.8Show/hide
Query:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA
        MGC+CNNNG     RILC+T+SFLFLLILASTQ+RFMAEGR +SKSGKTVSEDKV+LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK++TM   KNIA
Subjt:  MGCDCNNNG----SRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIA

Query:  YARDEGSNYKPMSWKCKCGSLIFNP
        YARDE SNYKPMSWKCKCGSLIFNP
Subjt:  YARDEGSNYKPMSWKCKCGSLIFNP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 33.8e-0738.81Show/hide
Query:  EDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIAYARDEGSNYKPMSWKCKC
        E+ V  R +IGS+PP CE++C  CE CEAIQ P             +I +     +NY+P  W+C C
Subjt:  EDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIAYARDEGSNYKPMSWKCKC

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 43.6e-0527.35Show/hide
Query:  RILCSTISFLFLLILASTQLRFMAEGRLVSK------SGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIAYARDEGSN
        R L + +    LL L S      A+GR + +       G  +  +K    G  GS PP C  +C  C+ C+ + VP  P  +  ++              
Subjt:  RILCSTISFLFLLILASTQLRFMAEGRLVSK------SGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIAYARDEGSN

Query:  YKPMSWKCKCGSLIFNP
        Y P +W+CKCG+ +F P
Subjt:  YKPMSWKCKCGSLIFNP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 18.2e-1037.18Show/hide
Query:  RGQIGSRPPKCERRCSWCEHCEAIQVP----------ANPQKTATMKKKKNIAYARDEGSNYKPMSWKCKCGSLIFNP
        + ++GS PP C  RC+ C  C AIQVP           NP     ++   ++    D+ SNYKPM WKC C    +NP
Subjt:  RGQIGSRPPKCERRCSWCEHCEAIQVP----------ANPQKTATMKKKKNIAYARDEGSNYKPMSWKCKCGSLIFNP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 52.1e-0534.33Show/hide
Query:  GQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIAYARDEGSNYKPMSWKCKCGSLIFNP
        G  GS PP C  +C  CE C+A+ VP  P     ++              Y P +W+CKCG+ +F P
Subjt:  GQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIAYARDEGSNYKPMSWKCKCGSLIFNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 22.7e-2149.58Show/hide
Query:  LFLLILASTQLRFMAEGR------LVSKSGKTVSEDKVMLRGQIGSRPPKCER-RCSWCEHCEAIQVPANPQ---------KTATMKKKKNIAYAR-DEG
        L LLIL ST    MA GR        +KSG    + K+M+RG IGSRPP+CER RC  C HCEAIQVP NPQ          +++  +  ++ Y R D+ 
Subjt:  LFLLILASTQLRFMAEGR------LVSKSGKTVSEDKVMLRGQIGSRPPKCER-RCSWCEHCEAIQVPANPQ---------KTATMKKKKNIAYAR-DEG

Query:  SNYKPMSWKCKCGSLIFNP
        +NYKPMSWKCKCG+ I+NP
Subjt:  SNYKPMSWKCKCGSLIFNP

Arabidopsis top hitse value%identityAlignment
AT3G13898.1 unknown protein2.7e-0838.81Show/hide
Query:  EDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIAYARDEGSNYKPMSWKCKC
        E+ V  R +IGS+PP CE++C  CE CEAIQ P             +I +     +NY+P  W+C C
Subjt:  EDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIAYARDEGSNYKPMSWKCKC

AT3G22820.1 allergen-related1.5e-0634.33Show/hide
Query:  GQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIAYARDEGSNYKPMSWKCKCGSLIFNP
        G  GS PP C  +C  CE C+A+ VP  P     ++              Y P +W+CKCG+ +F P
Subjt:  GQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIAYARDEGSNYKPMSWKCKCGSLIFNP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)2.5e-0627.35Show/hide
Query:  RILCSTISFLFLLILASTQLRFMAEGRLVSK------SGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIAYARDEGSN
        R L + +    LL L S      A+GR + +       G  +  +K    G  GS PP C  +C  C+ C+ + VP  P  +  ++              
Subjt:  RILCSTISFLFLLILASTQLRFMAEGRLVSK------SGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIAYARDEGSN

Query:  YKPMSWKCKCGSLIFNP
        Y P +W+CKCG+ +F P
Subjt:  YKPMSWKCKCGSLIFNP

AT4G37810.1 unknown protein1.9e-2249.58Show/hide
Query:  LFLLILASTQLRFMAEGR------LVSKSGKTVSEDKVMLRGQIGSRPPKCER-RCSWCEHCEAIQVPANPQ---------KTATMKKKKNIAYAR-DEG
        L LLIL ST    MA GR        +KSG    + K+M+RG IGSRPP+CER RC  C HCEAIQVP NPQ          +++  +  ++ Y R D+ 
Subjt:  LFLLILASTQLRFMAEGR------LVSKSGKTVSEDKVMLRGQIGSRPPKCER-RCSWCEHCEAIQVPANPQ---------KTATMKKKKNIAYAR-DEG

Query:  SNYKPMSWKCKCGSLIFNP
        +NYKPMSWKCKCG+ I+NP
Subjt:  SNYKPMSWKCKCGSLIFNP

AT5G10310.1 unknown protein5.9e-1137.18Show/hide
Query:  RGQIGSRPPKCERRCSWCEHCEAIQVP----------ANPQKTATMKKKKNIAYARDEGSNYKPMSWKCKCGSLIFNP
        + ++GS PP C  RC+ C  C AIQVP           NP     ++   ++    D+ SNYKPM WKC C    +NP
Subjt:  RGQIGSRPPKCERRCSWCEHCEAIQVP----------ANPQKTATMKKKKNIAYARDEGSNYKPMSWKCKCGSLIFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGTGATTGCAACAACAATGGCAGTCGAATCTTGTGTTCCACCATTTCTTTTCTGTTTCTTCTGATTTTGGCATCGACCCAGTTGAGATTCATGGCTGAAGGCAG
ATTGGTTTCAAAGAGTGGCAAGACAGTGAGTGAAGATAAAGTGATGTTAAGAGGGCAAATTGGGTCAAGGCCTCCAAAATGTGAGAGAAGATGCAGCTGGTGTGAGCATT
GTGAGGCCATTCAAGTTCCTGCAAATCCACAAAAAACAGCAACAATGAAGAAGAAGAAGAACATAGCTTATGCAAGAGATGAAGGTTCTAATTACAAGCCCATGAGTTGG
AAATGCAAATGTGGAAGCTTAATCTTCAACCCTTAA
mRNA sequenceShow/hide mRNA sequence
AAAATCACCAAAAAAAAAAAAAACCCCCAAATTCCAAAACTTTAATTAAACAAACAAAAACTGAAAATCAAAATCAAAACCAAAACAAAATCCCACACAGCTGCCATAGC
CATTGTTCTGTTCATTTCTCTTCTGATTCTGCCTTTTTGTTTCGTCGTTTTACTGTTTCTCTTCTCTGTCTTCAATTATTTTTCTTTCTGCCCAAATCCCTTTTCCCATA
AATTTGTTTTTGTTGTTGTTTTTGAGGCTCTTCTTTCGAGTTCTGCACTTTTGGTCTCTGCAAATTTCCCTCCTTTTTTCTTTGTCTTCAACGTTCCATCATCTCAAATA
TCTCTCTCAGACTAAGACATAATTCAGAGCAAAATTATTATAACTATTTTAGAGTGGAAATTCAGAACCTAAACACAAGGATTCTGGTTTCATTTTTACCCATCTCTCTG
TTTCACAACAAAAAAGAAAAATGGGGTGTGATTGCAACAACAATGGCAGTCGAATCTTGTGTTCCACCATTTCTTTTCTGTTTCTTCTGATTTTGGCATCGACCCAGTTG
AGATTCATGGCTGAAGGCAGATTGGTTTCAAAGAGTGGCAAGACAGTGAGTGAAGATAAAGTGATGTTAAGAGGGCAAATTGGGTCAAGGCCTCCAAAATGTGAGAGAAG
ATGCAGCTGGTGTGAGCATTGTGAGGCCATTCAAGTTCCTGCAAATCCACAAAAAACAGCAACAATGAAGAAGAAGAAGAACATAGCTTATGCAAGAGATGAAGGTTCTA
ATTACAAGCCCATGAGTTGGAAATGCAAATGTGGAAGCTTAATCTTCAACCCTTAAACCAGATCATGAATCTTTAATCCCTG
Protein sequenceShow/hide protein sequence
MGCDCNNNGSRILCSTISFLFLLILASTQLRFMAEGRLVSKSGKTVSEDKVMLRGQIGSRPPKCERRCSWCEHCEAIQVPANPQKTATMKKKKNIAYARDEGSNYKPMSW
KCKCGSLIFNP