CuGenDBv2

Gene ID	Sed0013064
Organism	Sechium edule (Chayote v1)
Description	Rho GTPase-activating gacO-like protein
Genome location	LG12:26774274..26776625
RNA-Seq Expression	Sed0013064
Synteny	Sed0013064
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6590227.1 hypothetical protein SDJN03_15650, partial [Cucurbita argyrosperma subsp. sororia]

4.1e-55

89.13

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIEDDD E++KG +IVSKEMKSPPA ENGKRRRR  QVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG

Query:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK
        DG  SSTDESTRSNGFR NGSRRKSKP RAAEAGV+C+
Subjt:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK

XP_004149029.1 uncharacterized protein LOC101218566 [Cucumis sativus]

5.7e-57

92.03

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIED+D E+LKGS+IVSKEMK+PPA ENGKRRRR  QVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG

Query:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK
        DG  SSTDESTRSNGFR NGSRRKSKPRRAAEAGVSCK
Subjt:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK

XP_022960708.1 uncharacterized protein LOC111461426 [Cucurbita moschata]

1.2e-54

88.41

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG
        MGRGRGKGRK TVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIEDDD E++KG +IVSKEMKSPPA ENGKRRRR  QVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG

Query:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK
        DG  SSTDESTRSNGFR NGSRRKSKP RAAEAGV+C+
Subjt:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK

XP_023516906.1 uncharacterized protein LOC111780671 [Cucurbita pepo subsp. pepo]

1.4e-55

89.86

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDD E++KG +IVSKEMKSPPA ENGKRRRR  QVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG

Query:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK
        DG  SSTDESTRSNGFR NGSRRKSKP RAAEAGV+C+
Subjt:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK

XP_038879962.1 uncharacterized protein LOC120071662 [Benincasa hispida]

1.7e-56

91.3

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDDAGSGEEEKIP QKRRGRPQKPLKDEIDEEEAEKIED+D E+LKGS+IVSKEMKSPPA ENGKRRRR  QVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG

Query:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK
        DG  SSTDESTRSNGFR NGSRRKSKPRRAAEAGV+CK
Subjt:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXE8 Uncharacterized protein

2.8e-57

92.03

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIED+D E+LKGS+IVSKEMK+PPA ENGKRRRR  QVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG

Query:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK
        DG  SSTDESTRSNGFR NGSRRKSKPRRAAEAGVSCK
Subjt:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK

A0A1S3BRW6 uncharacterized protein LOC103492511

2.8e-57

92.03

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIED+D E+LKGS+IVSKEMK+PPA ENGKRRRR  QVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG

Query:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK
        DG  SSTDESTRSNGFR NGSRRKSKPRRAAEAGVSCK
Subjt:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK

A0A5A7TJZ9 Uncharacterized protein

2.8e-57

92.03

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIED+D E+LKGS+IVSKEMK+PPA ENGKRRRR  QVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG

Query:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK
        DG  SSTDESTRSNGFR NGSRRKSKPRRAAEAGVSCK
Subjt:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK

A0A6J1H9S1 uncharacterized protein LOC111461426

5.7e-55

88.41

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG
        MGRGRGKGRK TVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIEDDD E++KG +IVSKEMKSPPA ENGKRRRR  QVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRR--QVKEKLDPVKDENG

Query:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK
        DG  SSTDESTRSNGFR NGSRRKSKP RAAEAGV+C+
Subjt:  DGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK

A0A6J1HUZ2 uncharacterized protein LOC111467706

7.5e-55

89.44

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKS----PPAVENGKRRRR--QVKEKLDPVK
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIE+LKG+EIVSKEMKS      A ENGKRRRR  QVKEKLDPVK
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKS----PPAVENGKRRRR--QVKEKLDPVK

Query:  DENGDGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK
        DENGDG  SSTDESTRSNGFR NGSRRKSKPRRAAEAGV+CK
Subjt:  DENGDGMPSSTDESTRSNGFRLNGSRRKSKPRRAAEAGVSCK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G42190.1 unknown protein

5.2e-24

48.63

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAE---------KIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRRQVKEKLD
        M RGRGKG+K   +  +D GSG+EEKIPA +RRGRPQKP+KD+ +EEE E         ++ED+D E +    + SK++K        ++R+       D
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAE---------KIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRRQVKEKLD

Query:  PVKDENGDGMPSSTDESTRSN--GFRLNGSRRKSKPRRAAEAGVSC
          ++ENG G   +TD+STRS   GFR NGSRRKSKPRRAAEA V C
Subjt:  PVKDENGDGMPSSTDESTRSN--GFRLNGSRRKSKPRRAAEAGVSC

AT3G57930.1 unknown protein

6.8e-24

50.36

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRRQVKEKLDPV-KDENGD
        M RGRGKG++   T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE E ++  D E  K  +            ENG++R++ V+ K   + ++ENG 
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRRQVKEKLDPV-KDENGD

Query:  GMPSSTDESTRSN---GFRLNGSRRKSKPRRAAEAGVSC
        G  SST++S +S+   GFR NGSRRK+KPRRAAEA V C
Subjt:  GMPSSTDESTRSN---GFRLNGSRRKSKPRRAAEAGVSC

AT3G57930.2 unknown protein

6.8e-24

50.36

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRRQVKEKLDPV-KDENGD
        M RGRGKG++   T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE E ++  D E  K  +            ENG++R++ V+ K   + ++ENG 
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRRQVKEKLDPV-KDENGD

Query:  GMPSSTDESTRSN---GFRLNGSRRKSKPRRAAEAGVSC
        G  SST++S +S+   GFR NGSRRK+KPRRAAEA V C
Subjt:  GMPSSTDESTRSN---GFRLNGSRRKSKPRRAAEAGVSC

Sequences

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CDS sequence

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ATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACTGTCACGAATCATGACGATGCTGGAAGTGGTGAGGAAGAGAAGATTCCTGCTCAAAAGCGGAGGGGAAGGCCACA
GAAGCCATTGAAGGATGAGATTGACGAGGAAGAAGCTGAAAAGATAGAAGATGACGACATCGAGAGCCTGAAAGGCAGTGAAATTGTAAGCAAGGAGATGAAAAGCCCAC
CCGCAGTAGAGAATGGGAAAAGGAGGAGAAGACAGGTGAAAGAAAAGCTTGATCCAGTCAAAGACGAAAATGGAGACGGAATGCCATCAAGCACTGATGAATCAACTAGA
TCGAATGGATTTCGTCTCAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCTGAAGCTGGGGTTAGCTGCAAGTGA

mRNA sequence

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CACAGCCTGGTGGTATACAATGGACTTTTGCTCAAAATTCTTGAGATTCTATCTCTAACATATCTCTTTGTTTTAGGCTTCTTTTTCTCTCTCTGATTCATATGTGCAGT
GCCCTTCCCCCACTGTTTCCCATATCCCAATCTTTCATTTCATTTTCCATTTCCCATTTTCAATCCCCTATTTGGATCATTGCTTATGCCTTTCCATTTCTTCACCTCTT
TTTCACCCTGTTCTCTTCAATCCTCCAACACCCACATGAATCTTTCTCTGTTTTTGTGACTTGTTTGAGTTCTTGAACAGATTGGCTGTAATGGGTTCTTTCCATTGAGT
CGTATGGGCTTCGTTTCTTATCAGTGGCTATCTATTGCATGATTTTTGTTGTTCTTGGAGTTTTATTAAGAGTATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACTG
TCACGAATCATGACGATGCTGGAAGTGGTGAGGAAGAGAAGATTCCTGCTCAAAAGCGGAGGGGAAGGCCACAGAAGCCATTGAAGGATGAGATTGACGAGGAAGAAGCT
GAAAAGATAGAAGATGACGACATCGAGAGCCTGAAAGGCAGTGAAATTGTAAGCAAGGAGATGAAAAGCCCACCCGCAGTAGAGAATGGGAAAAGGAGGAGAAGACAGGT
GAAAGAAAAGCTTGATCCAGTCAAAGACGAAAATGGAGACGGAATGCCATCAAGCACTGATGAATCAACTAGATCGAATGGATTTCGTCTCAATGGAAGCAGGCGAAAAA
GCAAGCCCCGTCGAGCTGCTGAAGCTGGGGTTAGCTGCAAGTGAAGCAACTTTGAAAGAATATGGTTTACTTACTTCAGGAAGGAGAAGATAAATTTTCAAGGTAGAAAA
TGAGGCTTAGTGATCTCTTAGATTCCATATTTTCTGTTCTCAATCTCATCATATAACTATTTCCATCACCATTCCTTTTCTTATTTCTAAAAATTGCTGAATTTGAGGAT
TCACTCTGCTGGTTTAA

Protein sequence

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MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIESLKGSEIVSKEMKSPPAVENGKRRRRQVKEKLDPVKDENGDGMPSSTDESTR
SNGFRLNGSRRKSKPRRAAEAGVSCK

Sed0013064 (gene) of Chayote v1 genome