; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013077 (gene) of Chayote v1 genome

Gene IDSed0013077
OrganismSechium edule (Chayote v1)
DescriptionTranscription factor PAR1-like
Genome locationLG08:37765286..37766125
RNA-Seq ExpressionSed0013077
SyntenySed0013077
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055213.1 transcription factor PAR1-like [Cucumis melo var. makuwa]3.4e-2176.25Show/hide
Query:  MASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKLQ
        MA  DLMA+SS   H  VA S  KRKRREAREVRRKVQKLRWVVPGGRGL+RE L+A+TA+YILHL+LKVCALE++LKLQ
Subjt:  MASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKLQ

KAE8124179.1 hypothetical protein FH972_019086 [Carpinus fangiana]1.1e-0651.25Show/hide
Query:  LMASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKL
        L A  DL   S       V V R  R +R  R V+ KVQKL+ +VPGG GLQ + L+A+TA+YILHLRL+V ALE++L+L
Subjt:  LMASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKL

KAG6573044.1 Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia]4.5e-1363.29Show/hide
Query:  MASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKL
        MAS DL+ +S+SS +  VA SRLKRKRREARE+RRKVQKLRWVV GGR L+RE L+AKTA YIL+L   +     +L L
Subjt:  MASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKL

KAG6584233.1 hypothetical protein SDJN03_20165, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2058.47Show/hide
Query:  NFSSYIYKTLNSFPFV----LPSPLLSFTCIVFLLMASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILH
        N +S ++K L+    V    + S L+SF         S++ M SS      ++ V  LKRKRREAR+VRRKVQKLRWVVPGGRGLQ+E L+AKTAHYILH
Subjt:  NFSSYIYKTLNSFPFV----LPSPLLSFTCIVFLLMASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILH

Query:  LRLKVCALETILKLQDQA
        LRLKVCAL+TILKLQD+A
Subjt:  LRLKVCALETILKLQDQA

KAG7019830.1 hypothetical protein SDJN02_18794, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2073.17Show/hide
Query:  ASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKLQDQA
        +S++ M SS      ++ V  LKRKRREAR+VRRKVQKLRWVVPGGRGLQ+E L+AKTAHYILHLRLKVCAL+TILKLQD+A
Subjt:  ASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKLQDQA

TrEMBL top hitse value%identityAlignment
A0A438EHL0 BHLH domain-containing protein1.3e-0555.36Show/hide
Query:  KRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKL
        K +RR  R VRRKV+KL+ ++PGGRGLQ + L+ +TA YILHLRL+V  L+ + K+
Subjt:  KRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKL

A0A438JND2 BHLH domain-containing protein1.3e-0555.36Show/hide
Query:  KRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKL
        K +RR  R VRRKV+KL+ ++PGGRGLQ + L+ +TA YILHLRL+V  L+ + K+
Subjt:  KRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKL

A0A5A7UGX9 Transcription factor PAR1-like1.6e-2176.25Show/hide
Query:  MASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKLQ
        MA  DLMA+SS   H  VA S  KRKRREAREVRRKVQKLRWVVPGGRGL+RE L+A+TA+YILHL+LKVCALE++LKLQ
Subjt:  MASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKLQ

A0A5N6RR97 Uncharacterized protein5.2e-0751.25Show/hide
Query:  LMASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKL
        L A  DL   S       V V R  R +R  R V+ KVQKL+ +VPGG GLQ + L+A+TA+YILHLRL+V ALE++L+L
Subjt:  LMASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKL

A5B8W0 Uncharacterized protein1.8e-0459.57Show/hide
Query:  KRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKV
        K +RR  R VRRKV+KL+ ++PGGRGLQ + L+ +TA YILHLRL++
Subjt:  KRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGTGATGTTAGTAGTCCCAATCGGCCGACAGCTGACGTGCACGTGCCAAATAAGCCAGGCACGTAAAGCGAAGGACAGCTGTCGAAATTATCGGATGTGCTGTGG
CAGTTGTCTGTCAAATTCTGGCAAAAAAACTAGTGGCCATGCTTTTGTATCCAATTGCTGCCTGACACGTATACATAACTCTCCTCACACCCATACAATATTGCCAACTA
TTTGCCCACATGGATCCCCAAATCCCCACCTGAACTTCTCCTCTTATATATACAAAACTCTTAACTCATTTCCATTTGTCCTTCCTTCTCCACTTCTTTCATTTACTTGT
ATTGTGTTTCTTCTAATGGCTTCATTGGATTTGATGGCTAGTTCCAGTTCCTCTGGCCATCCTTATGTGGCTGTTTCGAGGTTGAAGAGGAAGAGGAGAGAAGCCCGAGA
GGTTCGCAGAAAAGTGCAGAAGCTTCGGTGGGTAGTGCCCGGTGGCCGAGGGTTGCAACGGGAGCTTCTCTATGCCAAGACGGCTCATTATATATTGCATTTGAGGTTGA
AAGTTTGTGCTCTTGAAACCATTCTTAAATTGCAGGACCAAGCTTCACAACTTGTCAATATGATATGA
mRNA sequenceShow/hide mRNA sequence
CTTCAAGGAATTGGATAAGCCAGCCACGGGATGTGGGTGATGTTAGTAGTCCCAATCGGCCGACAGCTGACGTGCACGTGCCAAATAAGCCAGGCACGTAAAGCGAAGGA
CAGCTGTCGAAATTATCGGATGTGCTGTGGCAGTTGTCTGTCAAATTCTGGCAAAAAAACTAGTGGCCATGCTTTTGTATCCAATTGCTGCCTGACACGTATACATAACT
CTCCTCACACCCATACAATATTGCCAACTATTTGCCCACATGGATCCCCAAATCCCCACCTGAACTTCTCCTCTTATATATACAAAACTCTTAACTCATTTCCATTTGTC
CTTCCTTCTCCACTTCTTTCATTTACTTGTATTGTGTTTCTTCTAATGGCTTCATTGGATTTGATGGCTAGTTCCAGTTCCTCTGGCCATCCTTATGTGGCTGTTTCGAG
GTTGAAGAGGAAGAGGAGAGAAGCCCGAGAGGTTCGCAGAAAAGTGCAGAAGCTTCGGTGGGTAGTGCCCGGTGGCCGAGGGTTGCAACGGGAGCTTCTCTATGCCAAGA
CGGCTCATTATATATTGCATTTGAGGTTGAAAGTTTGTGCTCTTGAAACCATTCTTAAATTGCAGGACCAAGCTTCACAACTTGTCAATATGATATGATTTTTTCTATCA
TTTTCTCATCTTCAACTCCATGACTCTTTTGTAAAAATTGATTATTTTCTTCAGCTTTGTTTCCATTTGATCTCGCTGACATTGGAACAAGCATCAGTTATTTGTTGTCA
CATTGTGAAGTGTTTATTATATATTTGTGTTGATAAATGTATATACAATTGGGGTGGTAAATTTTGAACA
Protein sequenceShow/hide protein sequence
MWVMLVVPIGRQLTCTCQISQARKAKDSCRNYRMCCGSCLSNSGKKTSGHAFVSNCCLTRIHNSPHTHTILPTICPHGSPNPHLNFSSYIYKTLNSFPFVLPSPLLSFTC
IVFLLMASLDLMASSSSSGHPYVAVSRLKRKRREAREVRRKVQKLRWVVPGGRGLQRELLYAKTAHYILHLRLKVCALETILKLQDQASQLVNMI