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Sed0013086 (gene) of Chayote v1 genome

Gene IDSed0013086
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:7128577..7130873
RNA-Seq ExpressionSed0013086
SyntenySed0013086
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053822.1 uncharacterized protein E6C27_scaffold135G002100 [Cucumis melo var. makuwa]1.4e-3872Show/hide
Query:  VYRFILSI-NKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILN
        ++ F L I ++ +DSSV VEK+ TESVS + +D+Q+  GREN+V+AEP+ QI M    +MEAS+SADDVLRAGGFGARD+IGSFLPVASDSTDFEATILN
Subjt:  VYRFILSI-NKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILN

Query:  ARDYEGPRGEISRPGLGWKEATKAE
        ARDYEGP+GEISRPGLGWKEATK E
Subjt:  ARDYEGPRGEISRPGLGWKEATKAE
XP_008443333.1 PREDICTED: uncharacterized protein LOC103486945 isoform X1 [Cucumis melo]3.1e-3875Show/hide
Query:  NKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPRG
        ++ +DSSV VEK+ TESVS + +D+Q+  GREN+V+AEP+ QI M    +MEAS+SADDVLRAGGFGARD+IGSFLPVASDSTDFEATILNARDYEGP+G
Subjt:  NKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPRG

Query:  EISRPGLGWKEATKAE
        EISRPGLGWKEATK E
Subjt:  EISRPGLGWKEATKAE
XP_008443334.1 PREDICTED: uncharacterized protein LOC103486945 isoform X2 [Cucumis melo]1.1e-3875.21Show/hide
Query:  INKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPR
        I++ +DSSV VEK+ TESVS + +D+Q+  GREN+V+AEP+ QI M    +MEAS+SADDVLRAGGFGARD+IGSFLPVASDSTDFEATILNARDYEGP+
Subjt:  INKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPR

Query:  GEISRPGLGWKEATKAE
        GEISRPGLGWKEATK E
Subjt:  GEISRPGLGWKEATKAE
XP_008443335.1 PREDICTED: uncharacterized protein LOC103486945 isoform X3 [Cucumis melo]2.4e-3874.36Show/hide
Query:  INKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPR
        +++ +DSSV VEK+ TESVS + +D+Q+  GREN+V+AEP+ QI M    +MEAS+SADDVLRAGGFGARD+IGSFLPVASDSTDFEATILNARDYEGP+
Subjt:  INKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPR

Query:  GEISRPGLGWKEATKAE
        GEISRPGLGWKEATK E
Subjt:  GEISRPGLGWKEATKAE
XP_038905784.1 uncharacterized protein LOC120091740 [Benincasa hispida]7.4e-4073.81Show/hide
Query:  MEVYRFILSINKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATIL
        MEV+R     +K ED SVGVEK+ TESVS   +DVQ+  GR NI++ EPS Q+ M     MEAS+SADDVLRAGGFGARDDIGSFLPVASDSTDFEATIL
Subjt:  MEVYRFILSINKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATIL

Query:  NARDYEGPRGEISRPGLGWKEATKAE
        NARDYEGP+GEISRPGLGWKEATK E
Subjt:  NARDYEGPRGEISRPGLGWKEATKAE
TrEMBL top hitse value%identityAlignment
A0A1S3B7A8 uncharacterized protein LOC103486945 isoform X11.5e-3875Show/hide
Query:  NKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPRG
        ++ +DSSV VEK+ TESVS + +D+Q+  GREN+V+AEP+ QI M    +MEAS+SADDVLRAGGFGARD+IGSFLPVASDSTDFEATILNARDYEGP+G
Subjt:  NKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPRG

Query:  EISRPGLGWKEATKAE
        EISRPGLGWKEATK E
Subjt:  EISRPGLGWKEATKAE
A0A1S3B7U2 uncharacterized protein LOC103486945 isoform X31.2e-3874.36Show/hide
Query:  INKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPR
        +++ +DSSV VEK+ TESVS + +D+Q+  GREN+V+AEP+ QI M    +MEAS+SADDVLRAGGFGARD+IGSFLPVASDSTDFEATILNARDYEGP+
Subjt:  INKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPR

Query:  GEISRPGLGWKEATKAE
        GEISRPGLGWKEATK E
Subjt:  GEISRPGLGWKEATKAE
A0A1S4DUS7 uncharacterized protein LOC103486945 isoform X25.2e-3975.21Show/hide
Query:  INKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPR
        I++ +DSSV VEK+ TESVS + +D+Q+  GREN+V+AEP+ QI M    +MEAS+SADDVLRAGGFGARD+IGSFLPVASDSTDFEATILNARDYEGP+
Subjt:  INKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPR

Query:  GEISRPGLGWKEATKAE
        GEISRPGLGWKEATK E
Subjt:  GEISRPGLGWKEATKAE
A0A5A7UDF7 Uncharacterized protein6.8e-3972Show/hide
Query:  VYRFILSI-NKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILN
        ++ F L I ++ +DSSV VEK+ TESVS + +D+Q+  GREN+V+AEP+ QI M    +MEAS+SADDVLRAGGFGARD+IGSFLPVASDSTDFEATILN
Subjt:  VYRFILSI-NKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGM----DMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILN

Query:  ARDYEGPRGEISRPGLGWKEATKAE
        ARDYEGP+GEISRPGLGWKEATK E
Subjt:  ARDYEGPRGEISRPGLGWKEATKAE
A0A6J1J8Z2 uncharacterized protein LOC111482364 isoform X13.4e-3873.77Show/hide
Query:  RFILSINKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGMD----MEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARD
        R I  +++ ED SV VEKE TESVS   QDVQ+   REN+++ EPS QIGMD    MEAS+SADDVLRAGGFGARDDIGSFLPVASDSTDFEATI +AR 
Subjt:  RFILSINKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGMD----MEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARD

Query:  YEGPRGEISRPGLGWKEATKAE
        YEGP+GEISRPGLGWKEATK E
Subjt:  YEGPRGEISRPGLGWKEATKAE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G04000.1 unknown protein2.4e-2054.64Show/hide
Query:  GVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGMDMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPRGEISRPGLGW
        G + E  +S S   ++  S  GR+        P   ++MEASISA+DV+RAGGFGA+DDIGSFLPVASDSTDFE +I +ARDYE  + E+ RPGLG+
Subjt:  GVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGMDMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPRGEISRPGLGW
AT5G04000.2 unknown protein2.4e-2054.64Show/hide
Query:  GVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGMDMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPRGEISRPGLGW
        G + E  +S S   ++  S  GR+        P   ++MEASISA+DV+RAGGFGA+DDIGSFLPVASDSTDFE +I +ARDYE  + E+ RPGLG+
Subjt:  GVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGMDMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPRGEISRPGLGW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCTATCGATTTATTTTATCTATTAATAAGATGGAGGATTCTTCTGTGGGAGTTGAGAAAGAGGGTACAGAATCAGTTTCAGGCGTACAGCAAGATGTGCAGAG
TGGAATAGGTAGAGAAAATATAGTGAGGGCTGAACCATCTCCACAGATTGGTATGGACATGGAGGCCTCCATTTCAGCCGATGATGTTTTAAGGGCTGGAGGGTTTGGTG
CGAGGGATGATATTGGTAGCTTTCTTCCCGTTGCAAGTGATTCTACTGATTTTGAGGCTACAATTCTCAATGCTCGAGACTATGAAGGACCACGGGGAGAAATTTCTAGA
CCAGGTCTTGGCTGGAAAGAAGCTACAAAAGCTGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCTATCGATTTATTTTATCTATTAATAAGATGGAGGATTCTTCTGTGGGAGTTGAGAAAGAGGGTACAGAATCAGTTTCAGGCGTACAGCAAGATGTGCAGAG
TGGAATAGGTAGAGAAAATATAGTGAGGGCTGAACCATCTCCACAGATTGGTATGGACATGGAGGCCTCCATTTCAGCCGATGATGTTTTAAGGGCTGGAGGGTTTGGTG
CGAGGGATGATATTGGTAGCTTTCTTCCCGTTGCAAGTGATTCTACTGATTTTGAGGCTACAATTCTCAATGCTCGAGACTATGAAGGACCACGGGGAGAAATTTCTAGA
CCAGGTCTTGGCTGGAAAGAAGCTACAAAAGCTGAGTAG
Protein sequenceShow/hide protein sequence
MEVYRFILSINKMEDSSVGVEKEGTESVSGVQQDVQSGIGRENIVRAEPSPQIGMDMEASISADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPRGEISR
PGLGWKEATKAE