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Sed0013104 (gene) of Chayote v1 genome

Gene IDSed0013104
OrganismSechium edule (Chayote v1)
DescriptionCystatin/monellin superfamily protein
Genome locationLG11:1410093..1410490
RNA-Seq ExpressionSed0013104
SyntenySed0013104
Gene Ontology termsGO:0004869 - cysteine-type endopeptidase inhibitor activity (molecular function)
InterPro domainsIPR000010 - Cystatin domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16500.1 Cystatin/monellin superfamily protein5.4e-0437.5Show/hide
Query:  IKDVNGPIVRKLAVFAVNEHNKETGEKLRFKRAVNGS--VAQGAEHVAPPLMSYTLEVEVEVPGKSICKYEA
        IK+V+ P V  +A +A+ EHNKE+ EKL F + V G+  V  G +        Y L++  +  G  I  YEA
Subjt:  IKDVNGPIVRKLAVFAVNEHNKETGEKLRFKRAVNGS--VAQGAEHVAPPLMSYTLEVEVEVPGKSICKYEA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACGATCCAGAAGTGATAAAGGATGTGAATGGCCCGATTGTGCGCAAACTTGCAGTGTTTGCGGTGAATGAGCATAACAAGGAAACGGGAGAGAAATTGAGATT
CAAGCGCGCAGTGAATGGTTCAGTGGCTCAAGGTGCTGAACATGTTGCTCCTCCATTGATGTCTTATACTCTTGAAGTGGAGGTTGAAGTTCCTGGTAAATCCATTTGCA
AATATGAGGCTAAACTGAATGCCCATGCCGATCCAAGGTCTCACCCGACTGTCGCTCGGAATCCAATTTACTGGAAGAATCTCATCTCTTTTAAAAAATGGTCTTCTCGT
AACGAGGACGAGGACGAGGACGAGGACGAGGACGAGGAGTAA
mRNA sequenceShow/hide mRNA sequence
TTAAAATATCTATCAAAAGTGTGATAATGAGTTACGATCCAGAAGTGATAAAGGATGTGAATGGCCCGATTGTGCGCAAACTTGCAGTGTTTGCGGTGAATGAGCATAAC
AAGGAAACGGGAGAGAAATTGAGATTCAAGCGCGCAGTGAATGGTTCAGTGGCTCAAGGTGCTGAACATGTTGCTCCTCCATTGATGTCTTATACTCTTGAAGTGGAGGT
TGAAGTTCCTGGTAAATCCATTTGCAAATATGAGGCTAAACTGAATGCCCATGCCGATCCAAGGTCTCACCCGACTGTCGCTCGGAATCCAATTTACTGGAAGAATCTCA
TCTCTTTTAAAAAATGGTCTTCTCGTAACGAGGACGAGGACGAGGACGAGGACGAGGACGAGGAGTAA
Protein sequenceShow/hide protein sequence
MSYDPEVIKDVNGPIVRKLAVFAVNEHNKETGEKLRFKRAVNGSVAQGAEHVAPPLMSYTLEVEVEVPGKSICKYEAKLNAHADPRSHPTVARNPIYWKNLISFKKWSSR
NEDEDEDEDEDEE