CuGenDBv2

Gene ID	Sed0013108
Organism	Sechium edule (Chayote v1)
Description	F-box protein SKIP8
Genome location	LG07:12065424..12069068
RNA-Seq Expression	Sed0013108
Synteny	Sed0013108
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR032710 - NTF2-like domain superfamily IPR036047 - F-box-like domain superfamily IPR037401 - SnoaL-like domain IPR044260 - F-box protein SKIP8-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044925.1 F-box protein SKIP8 [Cucumis melo var. makuwa]

5.7e-142

82.11

Show/hide

Query:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE
        MEI S++T++L  QP PIAAIVTFLC LLA+F AVRLV VP I+RTK  QSE  G RNCNC     GG    GLDP  E++SS + SMPYLNGR  EVLE
Subjt:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE

Query:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE
        KAPVVV ER TGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTP+NGWK+YYAATRTIMNIN+QFYNIIR+
Subjt:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE

Query:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM
        RSLQ MS FWLNADYVKCIHASGEFFSGYNAVIQ+WQVAFNWE  INFQ+RDVRARVLTDMAWVSMKTYVDMD GPFNVTN+YEFHDGRWYMVHHHSSVM
Subjt:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM

Query:  -----MEQQMVHG
             MEQQMVHG
Subjt:  -----MEQQMVHG

XP_004149013.1 F-box protein SKIP8 [Cucumis sativus]

2.8e-141

81.47

Show/hide

Query:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE
        MEI S++T++L  QP PIAAIVTFLC LLA+F AVRLV VP I+RTK  QSE  G RNCNC     GG    GLDP  E++SS + SMPYLNGR  EVLE
Subjt:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE

Query:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE
        KAPVVV ER TGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTP+NGWK+YYAATRTIMNIN+QFYNIIR+
Subjt:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE

Query:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM
        RSLQ MS FWLNADYVKCIHASGEFFSGYNAV+Q+WQVAFNWE  INFQ+RDVRARVLTDMAWVSMKTYVDMD GPFNVTN+YEFH+GRWYMVHHHSSVM
Subjt:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM

Query:  -----MEQQMVHG
             MEQQMVHG
Subjt:  -----MEQQMVHG

XP_008451931.1 PREDICTED: F-box protein SKIP8 [Cucumis melo]

7.5e-142

81.79

Show/hide

Query:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE
        MEI S++T++L  QP PIAAI+TFLC LLA+F AVRLV VP I+RTK  QSE  G RNCNC     GG    GLDP  E++SS + SMPYLNGR  EVLE
Subjt:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE

Query:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE
        KAPVVV ER TGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTP+NGWK+YYAATRTIMNIN+QFYNIIR+
Subjt:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE

Query:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM
        RSLQ MS FWLNADYVKCIHASGEFFSGYNAVIQ+WQVAFNWE  INFQ+RDVRARVLTDMAWVSMKTYVDMD GPFNVTN+YEFHDGRWYMVHHHSSVM
Subjt:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM

Query:  -----MEQQMVHG
             MEQQMVHG
Subjt:  -----MEQQMVHG

XP_022931549.1 F-box protein SKIP8-like [Cucurbita moschata]

3.7e-141

82.11

Show/hide

Query:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE
        MEI+SA+T++L  QP PIAAIVTFLC LLA+FAAVRLV VP I+RTK  Q EG G RN NC     GG   GGL+P  E++SS + SMPYLNGR  EVLE
Subjt:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE

Query:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE
        KAPVVV ER TGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQDTVTP+NGWKAYYAATRTIMNIN+QFYNIIR+
Subjt:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE

Query:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM
        RSLQ MS FWLNADYVKCIHASGEFFSGYNAVIQ+WQVAFNWE  INFQ+RDVRARVLTDMAWVSMKTYVDMD GPFNVTN+YEFH+GRWYMVHHHSSVM
Subjt:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM

Query:  -----MEQQMVHG
             MEQQMVHG
Subjt:  -----MEQQMVHG

XP_038880969.1 F-box protein SKIP8-like [Benincasa hispida]

7.5e-142

82.11

Show/hide

Query:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE
        MEI S++T++L  QP PIAAIVTFLC LLA+FAAVRLV VP I+RTK  QS   G RNCNC     GG   GGLDP  E++SS + SMPYLNGR  EVLE
Subjt:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE

Query:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE
        KAPVVV ER TGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTP+NGWKAYYAATRTIMNIN+QFYNIIR+
Subjt:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE

Query:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM
        RSLQ MS FWLNADYVKCIHASGEFFSGYNAVIQ+WQ+AFNWE  INFQ+RDVRARVLTDMAWVSMKTYVDMD GPFNVTN+YEFH+GRWYMVHHHSSVM
Subjt:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM

Query:  -----MEQQMVHG
             MEQQMVHG
Subjt:  -----MEQQMVHG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KX34 F-box domain-containing protein

1.4e-141

81.47

Show/hide

Query:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE
        MEI S++T++L  QP PIAAIVTFLC LLA+F AVRLV VP I+RTK  QSE  G RNCNC     GG    GLDP  E++SS + SMPYLNGR  EVLE
Subjt:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE

Query:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE
        KAPVVV ER TGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTP+NGWK+YYAATRTIMNIN+QFYNIIR+
Subjt:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE

Query:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM
        RSLQ MS FWLNADYVKCIHASGEFFSGYNAV+Q+WQVAFNWE  INFQ+RDVRARVLTDMAWVSMKTYVDMD GPFNVTN+YEFH+GRWYMVHHHSSVM
Subjt:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM

Query:  -----MEQQMVHG
             MEQQMVHG
Subjt:  -----MEQQMVHG

A0A1S3BTF9 F-box protein SKIP8

3.6e-142

81.79

Show/hide

Query:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE
        MEI S++T++L  QP PIAAI+TFLC LLA+F AVRLV VP I+RTK  QSE  G RNCNC     GG    GLDP  E++SS + SMPYLNGR  EVLE
Subjt:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE

Query:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE
        KAPVVV ER TGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTP+NGWK+YYAATRTIMNIN+QFYNIIR+
Subjt:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE

Query:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM
        RSLQ MS FWLNADYVKCIHASGEFFSGYNAVIQ+WQVAFNWE  INFQ+RDVRARVLTDMAWVSMKTYVDMD GPFNVTN+YEFHDGRWYMVHHHSSVM
Subjt:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM

Query:  -----MEQQMVHG
             MEQQMVHG
Subjt:  -----MEQQMVHG

A0A5A7TU63 F-box protein SKIP8

2.8e-142

82.11

Show/hide

Query:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE
        MEI S++T++L  QP PIAAIVTFLC LLA+F AVRLV VP I+RTK  QSE  G RNCNC     GG    GLDP  E++SS + SMPYLNGR  EVLE
Subjt:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE

Query:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE
        KAPVVV ER TGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTP+NGWK+YYAATRTIMNIN+QFYNIIR+
Subjt:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE

Query:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM
        RSLQ MS FWLNADYVKCIHASGEFFSGYNAVIQ+WQVAFNWE  INFQ+RDVRARVLTDMAWVSMKTYVDMD GPFNVTN+YEFHDGRWYMVHHHSSVM
Subjt:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM

Query:  -----MEQQMVHG
             MEQQMVHG
Subjt:  -----MEQQMVHG

A0A6J1EUJ3 F-box protein SKIP8-like

1.8e-141

82.11

Show/hide

Query:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE
        MEI+SA+T++L  QP PIAAIVTFLC LLA+FAAVRLV VP I+RTK  Q EG G RN NC     GG   GGL+P  E++SS + SMPYLNGR  EVLE
Subjt:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE

Query:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE
        KAPVVV ER TGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQDTVTP+NGWKAYYAATRTIMNIN+QFYNIIR+
Subjt:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE

Query:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM
        RSLQ MS FWLNADYVKCIHASGEFFSGYNAVIQ+WQVAFNWE  INFQ+RDVRARVLTDMAWVSMKTYVDMD GPFNVTN+YEFH+GRWYMVHHHSSVM
Subjt:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM

Query:  -----MEQQMVHG
             MEQQMVHG
Subjt:  -----MEQQMVHG

A0A6J1FVP4 F-box protein SKIP8-like

6.8e-141

82.11

Show/hide

Query:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE
        MEI+SA TV+L  QP PIAAIVTFLC LLA+FAAVRLV VP I+RTK  QSEG G RNCNC     GG   GGLDP  EV+SS   +MPYLNGRV EVLE
Subjt:  MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNC-----GG--FGGLDPGTEVSSSITASMPYLNGRVTEVLE

Query:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE
        K P+VV ER TGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTP+NGWKAYYAATRTIMNIN+QF NIIRE
Subjt:  KAPVVVNERLTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRE

Query:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM
        RSLQ MS FWLNADYVKCIHASGEFFSGYNAVIQ+WQVAFNWE  INFQ+RDVRARVLTDMAWVSMKTYVDMD GPFNVTNVYE+H+GRWYMVHHHSSVM
Subjt:  RSLQGMSDFWLNADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVM

Query:  M-----EQQMVHG
        +     E+QM HG
Subjt:  M-----EQQMVHG

SwissProt top hits

e value

%identity

Alignment

Q93YV9 F-box protein SKIP8

2.9e-88

74.62

Show/hide

Query:  GASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRERSLQGMSDFWL
        G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TPVNGWK YYA TR I+++N++F+ IIR+R+LQ M+  WL
Subjt:  GASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRERSLQGMSDFWL

Query:  NADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVMM--EQQMV
        N+DYVKCIHASGE FSGYN VIQ+WQ+ FNWE   +FQ+  VR R+LTDMAWV+MK Y+++D GPF +TNV+EFH+GRW+MVHHHSSVM+  +QQ+V
Subjt:  NADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVMM--EQQMV

Q9T0B0 Probable F-box protein At4g23960

1.3e-35

58.26

Show/hide

Query:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRERSLQGMSDFWLNAD
        M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++FT E +  TPVNGWKA++A T+ +M +N +F++I+  RSL  M+  WLN+D
Subjt:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRERSLQGMSDFWLNAD

Query:  YVKCIHASGEFFSGY
        YVKC + SGE F+GY
Subjt:  YVKCIHASGEFFSGY

Arabidopsis top hits

e value

%identity

Alignment

AT4G10925.1 Nuclear transport factor 2 (NTF2) family protein

2.1e-89

74.62

Show/hide

Query:  GASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRERSLQGMSDFWL
        G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TPVNGWK YYA TR I+++N++F+ IIR+R+LQ M+  WL
Subjt:  GASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRERSLQGMSDFWL

Query:  NADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVMM--EQQMV
        N+DYVKCIHASGE FSGYN VIQ+WQ+ FNWE   +FQ+  VR R+LTDMAWV+MK Y+++D GPF +TNV+EFH+GRW+MVHHHSSVM+  +QQ+V
Subjt:  NADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVMM--EQQMV

AT4G10925.2 Nuclear transport factor 2 (NTF2) family protein

2.1e-89

74.62

Show/hide

Query:  GASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRERSLQGMSDFWL
        G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TPVNGWK YYA TR I+++N++F+ IIR+R+LQ M+  WL
Subjt:  GASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRERSLQGMSDFWL

Query:  NADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVMM--EQQMV
        N+DYVKCIHASGE FSGYN VIQ+WQ+ FNWE   +FQ+  VR R+LTDMAWV+MK Y+++D GPF +TNV+EFH+GRW+MVHHHSSVM+  +QQ+V
Subjt:  NADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVMM--EQQMV

AT4G10925.3 Nuclear transport factor 2 (NTF2) family protein

2.1e-89

74.62

Show/hide

Query:  GASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRERSLQGMSDFWL
        G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TPVNGWK YYA TR I+++N++F+ IIR+R+LQ M+  WL
Subjt:  GASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRERSLQGMSDFWL

Query:  NADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVMM--EQQMV
        N+DYVKCIHASGE FSGYN VIQ+WQ+ FNWE   +FQ+  VR R+LTDMAWV+MK Y+++D GPF +TNV+EFH+GRW+MVHHHSSVM+  +QQ+V
Subjt:  NADYVKCIHASGEFFSGYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVMM--EQQMV

AT4G23960.1 F-box family protein

9.1e-37

58.26

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Query:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRERSLQGMSDFWLNAD
        M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++FT E +  TPVNGWKA++A T+ +M +N +F++I+  RSL  M+  WLN+D
Subjt:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRERSLQGMSDFWLNAD

Query:  YVKCIHASGEFFSGY
        YVKC + SGE F+GY
Subjt:  YVKCIHASGEFFSGY

Sequences

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CDS sequence

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ATGGAGATTTCCTCCGCTTCCACCGTTTCCCTGCCGCCCCAACCCTCTCCTATAGCCGCGATTGTCACTTTTCTTTGTTCTCTTCTCGCCGTTTTCGCCGCCGTTCGATT
GGTTTATGTTCCTTTGATCAAGAGGACAAAACCGCCACAATCGGAGGGTTTCGGTGCCAGAAATTGTAACTGCGGCGGTTTTGGGGGTTTGGACCCCGGGACTGAGGTTT
CTTCTTCGATCACTGCGAGTATGCCTTATTTGAACGGCCGTGTTACGGAAGTGTTGGAGAAGGCGCCGGTGGTTGTGAATGAGCGGCTGACCGGCGCCTCCATGATGGAG
CAGTTGGTGCCGGAGATTACTACGCACGCTCTTAGTTACCTGGATTATCCCAGCCTGTGCCGTTTGTCCATGACTAATTCGTTGATGCGCAAGGCTGCAAATGATGATAA
TGCCTGGAAAGCGCTTTATCATAAGGACTTCACATTGGAGCAGGATACTGTAACTCCAGTAAACGGGTGGAAGGCTTACTATGCTGCAACAAGAACAATTATGAACATCA
ATTCCCAATTCTATAACATCATCCGAGAGAGGTCTCTTCAAGGGATGAGTGATTTTTGGTTGAATGCAGATTATGTGAAGTGTATTCACGCCTCGGGAGAATTCTTTTCC
GGGTATAATGCAGTAATTCAAAATTGGCAGGTTGCCTTTAATTGGGAACCAGCGATTAATTTTCAGATCCGCGACGTACGGGCTCGTGTACTTACCGACATGGCTTGGGT
TAGCATGAAAACCTATGTCGACATGGACATAGGGCCATTCAACGTGACTAACGTCTATGAGTTCCATGACGGTCGATGGTACATGGTGCATCATCATAGCTCTGTGATGA
TGGAACAACAAATGGTTCATGGGTAG

mRNA sequence

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TTCACGGGTCTACTCACTCACCCAAAACCTCCACCTCCTCCTTCAGCCTTTTCCGCACAAATTCCGATTCCATCACCGGAGATCACTTCACCGCCGCCAGTCTCCGGCGC
CGGCCAAGCCATTCCGCCTTCAAATCTCCATATCCGACCGTCGATTCTTCCCTCTCGCTTCTCCTCACGGCGACGGCGTGTTTCTCTCACCTTCCGCTCAACAACGCCCC
AGATTTCCTAGGGTTTCATGTTCTGCGAGGCTCAACGTCACACGCAGGCTTTCATGTCGTTTGAATGGAGATTTCCTCCGCTTCCACCGTTTCCCTGCCGCCCCAACCCT
CTCCTATAGCCGCGATTGTCACTTTTCTTTGTTCTCTTCTCGCCGTTTTCGCCGCCGTTCGATTGGTTTATGTTCCTTTGATCAAGAGGACAAAACCGCCACAATCGGAG
GGTTTCGGTGCCAGAAATTGTAACTGCGGCGGTTTTGGGGGTTTGGACCCCGGGACTGAGGTTTCTTCTTCGATCACTGCGAGTATGCCTTATTTGAACGGCCGTGTTAC
GGAAGTGTTGGAGAAGGCGCCGGTGGTTGTGAATGAGCGGCTGACCGGCGCCTCCATGATGGAGCAGTTGGTGCCGGAGATTACTACGCACGCTCTTAGTTACCTGGATT
ATCCCAGCCTGTGCCGTTTGTCCATGACTAATTCGTTGATGCGCAAGGCTGCAAATGATGATAATGCCTGGAAAGCGCTTTATCATAAGGACTTCACATTGGAGCAGGAT
ACTGTAACTCCAGTAAACGGGTGGAAGGCTTACTATGCTGCAACAAGAACAATTATGAACATCAATTCCCAATTCTATAACATCATCCGAGAGAGGTCTCTTCAAGGGAT
GAGTGATTTTTGGTTGAATGCAGATTATGTGAAGTGTATTCACGCCTCGGGAGAATTCTTTTCCGGGTATAATGCAGTAATTCAAAATTGGCAGGTTGCCTTTAATTGGG
AACCAGCGATTAATTTTCAGATCCGCGACGTACGGGCTCGTGTACTTACCGACATGGCTTGGGTTAGCATGAAAACCTATGTCGACATGGACATAGGGCCATTCAACGTG
ACTAACGTCTATGAGTTCCATGACGGTCGATGGTACATGGTGCATCATCATAGCTCTGTGATGATGGAACAACAAATGGTTCATGGGTAGAGAAAGAGAAGTAAACCATG
AAACTATACATAACACTAGGTGGTACAAACATAGGTGGTGTGTGGTAGCAGAAGCAAGATTTCAATTTTTTTTCTTCTTTCTAGTCCATTACTTTTAATCAACATCAGTT
AACTGTTCCAACCTAGTTTTGCCTAGGTTGTGATTGCTGCTCCCTTTTTCTTTCAATGTTTTGCTTGATCTAATCCATGGCGCTACTTGTCAAGATGTAGTAAGGTTAGA
CCGCTGTTTCGGTAGTCGAGGTGTGCAAAAGTTGATCTAAGCACTCCATTCTAATCCTCGAAATTAAGTAAATGATAGTTTTGCAAGTATTTTTTCTTAGTTTGGTTTAT
GCTCAAAATCAAATGGCTGCTGCTGCGTTTTTTTTTCCAAATAAA

Protein sequence

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MEISSASTVSLPPQPSPIAAIVTFLCSLLAVFAAVRLVYVPLIKRTKPPQSEGFGARNCNCGGFGGLDPGTEVSSSITASMPYLNGRVTEVLEKAPVVVNERLTGASMME
QLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYAATRTIMNINSQFYNIIRERSLQGMSDFWLNADYVKCIHASGEFFS
GYNAVIQNWQVAFNWEPAINFQIRDVRARVLTDMAWVSMKTYVDMDIGPFNVTNVYEFHDGRWYMVHHHSSVMMEQQMVHG

Sed0013108 (gene) of Chayote v1 genome