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Sed0013112 (gene) of Chayote v1 genome

Gene IDSed0013112
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG02:48738888..48739556
RNA-Seq ExpressionSed0013112
SyntenySed0013112
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049516.1 hypothetical protein E6C27_scaffold171G007700 [Cucumis melo var. makuwa]2.3e-2170Show/hide
Query:  ARKDLVKIGLEGFALIDEHYDQPRR--RLVAPGQPQPMPMAQPPRRMVEPSPPIRCDQVVKAYGGAIIKEWGNGKRVNKV
        AR DL +IG+E FALI+EHYD+PRR  R V P  PQP+   QPP+RMVE SPPIRCDQ+ KA+GG IIKEWG GKRVNKV
Subjt:  ARKDLVKIGLEGFALIDEHYDQPRR--RLVAPGQPQPMPMAQPPRRMVEPSPPIRCDQVVKAYGGAIIKEWGNGKRVNKV

KAG6575081.1 hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0445.24Show/hide
Query:  MAARKDLVKIGLEGFALIDEHYDQ-PRRRLVA------PGQPQ-PMPMAQPPRRMVEPSP-PIRCDQVVKAYGGAIIKEWGNGK
        MA R DL KIG EGF LIDE++ + P  R  A      P  PQ P    QPPR+  E  P  + C+QV KA GG +I  W   K
Subjt:  MAARKDLVKIGLEGFALIDEHYDQ-PRRRLVA------PGQPQ-PMPMAQPPRRMVEPSP-PIRCDQVVKAYGGAIIKEWGNGK

KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0650.65Show/hide
Query:  MAARKDLVKIGLEGFALIDEHYDQ---PRRRLVA-PGQPQ-PMPMAQPPRRMVEPSP-PIRCDQVVKAYGGAIIKEW
        MA R DL KIG EGF LIDE++ +    RR  VA P  PQ P    QPPR+M E  P P+ C+QV +A GG +I  W
Subjt:  MAARKDLVKIGLEGFALIDEHYDQ---PRRRLVA-PGQPQ-PMPMAQPPRRMVEPSP-PIRCDQVVKAYGGAIIKEW

KGN57134.1 hypothetical protein Csa_010351 [Cucumis sativus]2.7e-0652.24Show/hide
Query:  ARKDLVKIGLEGFALIDEHY----DQPRRRLVAPGQPQPMPMAQPPRRMVEPSPPIRCDQVVKAYGG
        +R DL KIGLEGFALI+E Y     + R R VA   PQ +    PP+RM E SPPIRC+Q+ K + G
Subjt:  ARKDLVKIGLEGFALIDEHY----DQPRRRLVAPGQPQPMPMAQPPRRMVEPSPPIRCDQVVKAYGG

KGN57135.1 hypothetical protein Csa_010300 [Cucumis sativus]9.0e-1866.27Show/hide
Query:  MAAR-KDLVKIGLEGFALIDEHYDQPRR--RLVAPGQPQPMPMAQPPRRMVEPSPPIRCDQVVKAYGGAIIKEWGNGKRVNKV
        MAAR  DL +IGLEGF  I+E YD+PRR  R VAP  PQP+    PP+R VE SP IRCDQ+ KA+GG IIKEWG GKRVNKV
Subjt:  MAAR-KDLVKIGLEGFALIDEHYDQPRR--RLVAPGQPQPMPMAQPPRRMVEPSPPIRCDQVVKAYGGAIIKEWGNGKRVNKV

TrEMBL top hitse value%identityAlignment
A0A0A0L5A8 Uncharacterized protein4.4e-1866.27Show/hide
Query:  MAAR-KDLVKIGLEGFALIDEHYDQPRR--RLVAPGQPQPMPMAQPPRRMVEPSPPIRCDQVVKAYGGAIIKEWGNGKRVNKV
        MAAR  DL +IGLEGF  I+E YD+PRR  R VAP  PQP+    PP+R VE SP IRCDQ+ KA+GG IIKEWG GKRVNKV
Subjt:  MAAR-KDLVKIGLEGFALIDEHYDQPRR--RLVAPGQPQPMPMAQPPRRMVEPSPPIRCDQVVKAYGGAIIKEWGNGKRVNKV

A0A0A0L7Z0 Uncharacterized protein1.3e-0652.24Show/hide
Query:  ARKDLVKIGLEGFALIDEHY----DQPRRRLVAPGQPQPMPMAQPPRRMVEPSPPIRCDQVVKAYGG
        +R DL KIGLEGFALI+E Y     + R R VA   PQ +    PP+RM E SPPIRC+Q+ K + G
Subjt:  ARKDLVKIGLEGFALIDEHY----DQPRRRLVAPGQPQPMPMAQPPRRMVEPSPPIRCDQVVKAYGG

A0A5A7U5Q5 Uncharacterized protein1.1e-2170Show/hide
Query:  ARKDLVKIGLEGFALIDEHYDQPRR--RLVAPGQPQPMPMAQPPRRMVEPSPPIRCDQVVKAYGGAIIKEWGNGKRVNKV
        AR DL +IG+E FALI+EHYD+PRR  R V P  PQP+   QPP+RMVE SPPIRCDQ+ KA+GG IIKEWG GKRVNKV
Subjt:  ARKDLVKIGLEGFALIDEHYDQPRR--RLVAPGQPQPMPMAQPPRRMVEPSPPIRCDQVVKAYGGAIIKEWGNGKRVNKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTCGTAAAGATCTTGTCAAGATCGGGCTAGAAGGCTTTGCCCTCATAGATGAACACTACGACCAACCTAGGAGGAGGTTGGTCGCTCCTGGTCAACCGCAACC
AATGCCCATGGCTCAACCTCCACGACGGATGGTTGAACCTTCACCGCCTATTCGTTGTGATCAAGTTGTTAAAGCTTATGGCGGTGCGATCATTAAAGAATGGGGTAATG
GGAAGCGGGTGAACAAGGTTTGTTGA
mRNA sequenceShow/hide mRNA sequence
TAAGTTTCCAACAAATTAGAGCCCTTCCCCTATTTATAGAGAGCCTCTTCAACTTAATCTCTCACAACCAAACCAAAACACTAAGCTTAAGAACACAAGTTCTAAGTATC
ACACCATGGCAGCTCGTAAAGATCTTGTCAAGATCGGGCTAGAAGGCTTTGCCCTCATAGATGAACACTACGACCAACCTAGGAGGAGGTTGGTCGCTCCTGGTCAACCG
CAACCAATGCCCATGGCTCAACCTCCACGACGGATGGTTGAACCTTCACCGCCTATTCGTTGTGATCAAGTTGTTAAAGCTTATGGCGGTGCGATCATTAAAGAATGGGG
TAATGGGAAGCGGGTGAACAAGGTTTGTTGACCTTGTTGAGCCCTTCCTAAAAGAATAGATCAGATGTTTTAACCTTGGAGTTTTATAATCAGGTGGCACTCTTTGTTTA
TAAAAAAAAATGTATATTATAGTTTGTGTGTTGATGTGAACCTAGCTTATGATCAAGAGTCAACTCTTGTAAAAATTATGGGGTATGGTTAATAATGATACAAAGTTATG
AGTAAAAGTAATTAAATACTATGGTTGCCTTTACTTGCAGTTTCTTGTGTGTTGTTGATTTAGCTGCATAAAACTAGACTGAGCACAATTTTTTTTTAAACATGTTATCT
TGGTAGGAT
Protein sequenceShow/hide protein sequence
MAARKDLVKIGLEGFALIDEHYDQPRRRLVAPGQPQPMPMAQPPRRMVEPSPPIRCDQVVKAYGGAIIKEWGNGKRVNKVC