CuGenDBv2

Gene ID	Sed0013123
Organism	Sechium edule (Chayote v1)
Description	Epidermal patterning factor-like protein
Genome location	LG12:33642854..33643858
RNA-Seq Expression	Sed0013123
Synteny	Sed0013123
Gene Ontology terms	GO:0010052 - guard cell differentiation (biological process) GO:0005576 - extracellular region (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039455 - EPIDERMAL PATTERNING FACTOR-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022933440.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X1 [Cucurbita moschata]

1.5e-41

79.82

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Query:  MALKNSLFLILPLIFCLSLSHPT-----SGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADD-NYGVAVSNLESAQIPKDDAYYLLSWKC
        MAL NSLFLILPLIF LS+ HPT     SG+EDSKQKEL IGSRPP+CF+KCLNC+PCVAALVISQRHK DD N G  VSNLE+AQ+PKDDAYYLLSWKC
Subjt:  MALKNSLFLILPLIFCLSLSHPT-----SGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADD-NYGVAVSNLESAQIPKDDAYYLLSWKC

Query:  KCRDKYFQP
        KC+DKYFQP
Subjt:  KCRDKYFQP

XP_022933441.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X2 [Cucurbita moschata]

2.1e-43

83.65

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Query:  MALKNSLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADD-NYGVAVSNLESAQIPKDDAYYLLSWKCKCRDK
        MAL NSLFLILPLIF LS+ HPTSG+EDSKQKEL IGSRPP+CF+KCLNC+PCVAALVISQRHK DD N G  VSNLE+AQ+PKDDAYYLLSWKCKC+DK
Subjt:  MALKNSLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADD-NYGVAVSNLESAQIPKDDAYYLLSWKCKCRDK

Query:  YFQP
        YFQP
Subjt:  YFQP

XP_022971966.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X2 [Cucurbita maxima]

4.8e-40

79.81

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Query:  MALKNSLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKA-DDNYGVAVSNLESAQIPKDDAYYLLSWKCKCRDK
        MAL NSLFLILPLIF LS+  PTSG+EDSKQKEL IGSRPP+CF+KCLNC+PCVAALVISQR K  D+N G  VSN+E+AQ+PKDDAYYLLSWKCKC+DK
Subjt:  MALKNSLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKA-DDNYGVAVSNLESAQIPKDDAYYLLSWKCKCRDK

Query:  YFQP
        YFQP
Subjt:  YFQP

XP_023531006.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X1 [Cucurbita pepo subsp. pepo]

1.5e-41

79.82

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Query:  MALKNSLFLILPLIFCLSLSHPT-----SGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADD-NYGVAVSNLESAQIPKDDAYYLLSWKC
        MAL NSLFLILPLIF LS+ HPT     SG+EDSKQKEL IGSRPP+CF+KCLNC+PCVAALVISQRHK DD N G  VSNLE+AQ+PKDDAYYLLSWKC
Subjt:  MALKNSLFLILPLIFCLSLSHPT-----SGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADD-NYGVAVSNLESAQIPKDDAYYLLSWKC

Query:  KCRDKYFQP
        KC+DKYFQP
Subjt:  KCRDKYFQP

XP_023531007.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X2 [Cucurbita pepo subsp. pepo]

2.1e-43

83.65

Show/hide

Query:  MALKNSLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADD-NYGVAVSNLESAQIPKDDAYYLLSWKCKCRDK
        MAL NSLFLILPLIF LS+ HPTSG+EDSKQKEL IGSRPP+CF+KCLNC+PCVAALVISQRHK DD N G  VSNLE+AQ+PKDDAYYLLSWKCKC+DK
Subjt:  MALKNSLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADD-NYGVAVSNLESAQIPKDDAYYLLSWKCKCRDK

Query:  YFQP
        YFQP
Subjt:  YFQP

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EZ19 Epidermal patterning factor-like protein

1.0e-43

83.65

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Query:  MALKNSLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADD-NYGVAVSNLESAQIPKDDAYYLLSWKCKCRDK
        MAL NSLFLILPLIF LS+ HPTSG+EDSKQKEL IGSRPP+CF+KCLNC+PCVAALVISQRHK DD N G  VSNLE+AQ+PKDDAYYLLSWKCKC+DK
Subjt:  MALKNSLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADD-NYGVAVSNLESAQIPKDDAYYLLSWKCKCRDK

Query:  YFQP
        YFQP
Subjt:  YFQP

A0A6J1F4W6 Epidermal patterning factor-like protein

7.2e-42

79.82

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Query:  MALKNSLFLILPLIFCLSLSHPT-----SGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADD-NYGVAVSNLESAQIPKDDAYYLLSWKC
        MAL NSLFLILPLIF LS+ HPT     SG+EDSKQKEL IGSRPP+CF+KCLNC+PCVAALVISQRHK DD N G  VSNLE+AQ+PKDDAYYLLSWKC
Subjt:  MALKNSLFLILPLIFCLSLSHPT-----SGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADD-NYGVAVSNLESAQIPKDDAYYLLSWKC

Query:  KCRDKYFQP
        KC+DKYFQP
Subjt:  KCRDKYFQP

A0A6J1I4N2 Epidermal patterning factor-like protein

2.3e-40

79.81

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Query:  MALKNSLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKA-DDNYGVAVSNLESAQIPKDDAYYLLSWKCKCRDK
        MAL NSLFLILPLIF LS+  PTSG+EDSKQKEL IGSRPP+CF+KCLNC+PCVAALVISQR K  D+N G  VSN+E+AQ+PKDDAYYLLSWKCKC+DK
Subjt:  MALKNSLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKA-DDNYGVAVSNLESAQIPKDDAYYLLSWKCKCRDK

Query:  YFQP
        YFQP
Subjt:  YFQP

A0A6J1I8G8 Epidermal patterning factor-like protein

1.7e-38

76.15

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Query:  MALKNSLFLILPLIFCLSLSHPTS-----GDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKA-DDNYGVAVSNLESAQIPKDDAYYLLSWKC
        MAL NSLFLILPLIF LS+  PTS     G+EDSKQKEL IGSRPP+CF+KCLNC+PCVAALVISQR K  D+N G  VSN+E+AQ+PKDDAYYLLSWKC
Subjt:  MALKNSLFLILPLIFCLSLSHPTS-----GDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKA-DDNYGVAVSNLESAQIPKDDAYYLLSWKC

Query:  KCRDKYFQP
        KC+DKYFQP
Subjt:  KCRDKYFQP

A0A6J1JFP8 Epidermal patterning factor-like protein

1.1e-37

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Query:  MALKNSLFLILPLIFCLSLSHPTSGDED-SKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADDNYGVAVSNLESA-QIPKDDAYYLLSWKCKCRD
        MALK+SL LILPLIF LSLSHPTSG+ED S+QKELVIGSRPP+CF+KCLNCRPCVAALVISQRHK   N   A SNLE+A   P+DDAYYLLSWKCKC+D
Subjt:  MALKNSLFLILPLIFCLSLSHPTSGDED-SKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADDNYGVAVSNLESA-QIPKDDAYYLLSWKCKCRD

Query:  KYFQP
        KYFQP
Subjt:  KYFQP

SwissProt top hits

e value

%identity

Alignment

Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 8

3.5e-09

33.33

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Query:  SLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALV-ISQRHKADDNYGVAVSNLESAQIPKDDAYYLLSWKCKCRDKYFQP
        ++F  L  + C+S +H        + KE V+GS PP C +KC NC+PC+  L  I   H  DD+                + YY + W C+CRD+ F+P
Subjt:  SLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALV-ISQRHKADDNYGVAVSNLESAQIPKDDAYYLLSWKCKCRDKYFQP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 1

4.4e-04

26.45

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Query:  ALKNSLFLILPLIFCLSLSHPTSG------DEDSKQKELV-----IGSRPPQCFSKCLNCRPCVAALV--------ISQRHKADDNYGVAVSNLESAQIP
        A+  S  L+LPLI  L ++   S          S Q  L+     +GS PP C ++C NC PC+A  V         ++ +     +    S+L +  + 
Subjt:  ALKNSLFLILPLIFCLSLSHPTSG------DEDSKQKELV-----IGSRPPQCFSKCLNCRPCVAALV--------ISQRHKADDNYGVAVSNLESAQIP

Query:  KDDAYYLLSWKCKCRDKYFQP
        +   Y  + WKC C   ++ P
Subjt:  KDDAYYLLSWKCKCRDKYFQP

Arabidopsis top hits

e value

%identity

Alignment

AT1G80133.1 unknown protein

2.5e-10

33.33

Show/hide

Query:  SLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALV-ISQRHKADDNYGVAVSNLESAQIPKDDAYYLLSWKCKCRDKYFQP
        ++F  L  + C+S +H        + KE V+GS PP C +KC NC+PC+  L  I   H  DD+                + YY + W C+CRD+ F+P
Subjt:  SLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALV-ISQRHKADDNYGVAVSNLESAQIPKDDAYYLLSWKCKCRDKYFQP

AT5G10310.1 unknown protein

3.1e-05

26.45

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Query:  ALKNSLFLILPLIFCLSLSHPTSG------DEDSKQKELV-----IGSRPPQCFSKCLNCRPCVAALV--------ISQRHKADDNYGVAVSNLESAQIP
        A+  S  L+LPLI  L ++   S          S Q  L+     +GS PP C ++C NC PC+A  V         ++ +     +    S+L +  + 
Subjt:  ALKNSLFLILPLIFCLSLSHPTSG------DEDSKQKELV-----IGSRPPQCFSKCLNCRPCVAALV--------ISQRHKADDNYGVAVSNLESAQIP

Query:  KDDAYYLLSWKCKCRDKYFQP
        +   Y  + WKC C   ++ P
Subjt:  KDDAYYLLSWKCKCRDKYFQP

Sequences

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CDS sequence

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ATGGCTTTAAAAAACTCTCTCTTTCTCATTCTCCCTCTCATATTTTGCCTTTCTCTATCTCACCCCACATCAGGGGATGAGGATTCAAAGCAGAAGGAATTGGTAATTGG
GTCAAGGCCACCACAGTGTTTCAGTAAGTGCTTAAATTGCAGGCCATGTGTTGCTGCTTTGGTTATCTCTCAGCGCCATAAAGCTGATGATAATTATGGTGTTGCTGTTT
CTAATTTGGAGTCTGCTCAAATCCCTAAAGATGATGCCTATTATCTTCTTTCATGGAAATGTAAGTGTAGAGATAAGTACTTTCAACCTTGA

mRNA sequence

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TTTGAATCTCCAATTTTTCTCTCAATCTCTCTCCAAACATGGCTTTAAAAAACTCTCTCTTTCTCATTCTCCCTCTCATATTTTGCCTTTCTCTATCTCACCCCACATCA
GGGGATGAGGATTCAAAGCAGAAGGAATTGGTAATTGGGTCAAGGCCACCACAGTGTTTCAGTAAGTGCTTAAATTGCAGGCCATGTGTTGCTGCTTTGGTTATCTCTCA
GCGCCATAAAGCTGATGATAATTATGGTGTTGCTGTTTCTAATTTGGAGTCTGCTCAAATCCCTAAAGATGATGCCTATTATCTTCTTTCATGGAAATGTAAGTGTAGAG
ATAAGTACTTTCAACCTTGAAAAAAACACATAGGGGTGTTTGGAGCAAAAGAATATAGGGTATAATGGTTAGTCGAGGTTGCGCACCCCCCCTTTAGATCGTTCTATTCG
TGCTTGAAAAGGTTATATGTGTTTAGGATGAAGGAAATGATTATGCTGAGAGTGGGAACAAAATGTTATTTATGGCAGGTTGTATATTGGTTACGAGGATGAAAAGTAGT
TATAGGGTAATGAAAAGTGATCGTGAAGGAATGAGATTATGAAAGGGAGGAATAGTGATTATGGAAAGAATGATTGTCAGTGGTACAAACGTAGGTAAGGGAATTATTCT
CCATCTTTCCGATTTGATCCCCTTCCCCAAACACCCTTTTAATAACTTCCATCTGCTCATCTCCATGAATCAGAATATATTGATTCTCGAGAGAGATTTTTGTTGGTGTT
TTTCTCTTTTCCTCTGTTTTTCTTGAGAAATTGAATAGACCAATGAATCTCTCTTTCTTGAGATATGAACATAAATTACTAGATTGTGTAATAAGTTAGTTGTTTTCTTG
AATCAAATGCATGGTTTGTCCTAAATT

Protein sequence

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MALKNSLFLILPLIFCLSLSHPTSGDEDSKQKELVIGSRPPQCFSKCLNCRPCVAALVISQRHKADDNYGVAVSNLESAQIPKDDAYYLLSWKCKCRDKYFQP

Sed0013123 (gene) of Chayote v1 genome