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Sed0013162 (gene) of Chayote v1 genome

Gene IDSed0013162
OrganismSechium edule (Chayote v1)
DescriptionNDR1/HIN1-like protein 12
Genome locationLG05:36274040..36274645
RNA-Seq ExpressionSed0013162
SyntenySed0013162
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006898 - receptor-mediated endocytosis (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030124 - AP-4 adaptor complex (cellular component)
GO:0140312 - cargo adaptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052257.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa]1.6e-9284.58Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICA IA+AVI+AGIVIFIGYVTIRPRVP+ISVTDG+LDRIR SRT LLE+QMKIVVRAEN+NA+AHASFS++DFVL+F
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF

Query:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD
        DGI+IASLVA R FKVNKMSYLDLHFLVESSAIPLD TQMQHL+WSLKRNL+QFDL+G+S+TRWRVG+LGPLKF CRLNCHLRF PRNG++I  PCSS  
Subjt:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD

Query:  K
        K
Subjt:  K

KAG7024719.1 hypothetical protein SDJN02_13537, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-9286.07Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICA IAVAVIIAGIVIFIGYVTIRP VP+ISVTDG+LDRIR SR  LLE+QMKIVVRAEN+NARA ASFS +DFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF

Query:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD
        DGI+IASLVA R FKVNKMSYLDLHFLVESSAIPL+P QMQHL+WSL RNLMQFDL+G+S+TRWRVGVLGPLKF C+LNC LRFYPRNG++I APCSSKD
Subjt:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD

Query:  K
        K
Subjt:  K

XP_022135525.1 uncharacterized protein LOC111007456 [Momordica charantia]1.9e-9385.57Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF
        MPP FLSSLKRHTHPLIWIAGIICA IA+AVII GIVIFIGYVTIRPRVP+ISVTDG+LDRIR SRT LLE+QMKIVVRAEN+NA+AHASFS++DFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF

Query:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD
        DGI+IASLVARR FKV+KMSYLDLHFLVESSAIPL+PTQM HL+WSLKRNLMQFDL+G+S+TRWRVGVLGPLKF CRLNCHLRF+PRNG+++ APCSSK 
Subjt:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD

Query:  K
        K
Subjt:  K

XP_022940744.1 uncharacterized protein LOC111446247 [Cucurbita moschata]2.9e-9789.55Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICAAIA+AVIIAGIVIFIGYVTIRPRVPTISVTDG+LDRIR SRT LLE+QMKIVVRAEN+NARAHASFS +DFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF

Query:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD
        DGI+IASLVA R FKVNKMSYLDLHFLVESSAIPL+PTQMQHL WSLKRNLMQFDL+G+S+TRWRVGVLGPLKF CRLNCHLRFYPRNG++I APCSS+D
Subjt:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD

Query:  K
        K
Subjt:  K

XP_038896622.1 uncharacterized protein LOC120084885 [Benincasa hispida]7.8e-9586.07Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF
        MPPNFLSS+KRHTHPLIWIAGIICA IA+AVIIAGIVIFIGYVTIRPRVP+ISVTDG+LDRIR SRT LLE+QMKIVVRAEN+NARAHASFS++DFVL+F
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF

Query:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD
        DGI+IASLVA R FKVNKMSYLDLHFLVESSAIPL+PTQMQHL+WSLKR+LMQFDL+G+S+TRWRVG+LGPLKF CRLNCHLRFYPRNG++I APCSS+ 
Subjt:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A0A0L1I9 Uncharacterized protein8.7e-9283.58Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICA IA+AVIIAGIVIFIGYVTIRPRVP+ISVTDG+L+RIR SRT LLE+QMKIVVRAEN+NA+AHA FS++DFVL+F
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF

Query:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD
        DGI+IASLVA R FKVNKM+YLDLHFLVESSAIPLD TQMQHL+WSLKR+L+QFDL+G+S+TRWRVGVLGPLKF CRL+CHLRF+PRNG++I  PCSSK 
Subjt:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD

Query:  K
        K
Subjt:  K

A0A5D3BSN8 NDR1/HIN1-like protein 127.9e-9384.58Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICA IA+AVI+AGIVIFIGYVTIRPRVP+ISVTDG+LDRIR SRT LLE+QMKIVVRAEN+NA+AHASFS++DFVL+F
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF

Query:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD
        DGI+IASLVA R FKVNKMSYLDLHFLVESSAIPLD TQMQHL+WSLKRNL+QFDL+G+S+TRWRVG+LGPLKF CRLNCHLRF PRNG++I  PCSS  
Subjt:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD

Query:  K
        K
Subjt:  K

A0A6J1C199 uncharacterized protein LOC1110074569.3e-9485.57Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF
        MPP FLSSLKRHTHPLIWIAGIICA IA+AVII GIVIFIGYVTIRPRVP+ISVTDG+LDRIR SRT LLE+QMKIVVRAEN+NA+AHASFS++DFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF

Query:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD
        DGI+IASLVARR FKV+KMSYLDLHFLVESSAIPL+PTQM HL+WSLKRNLMQFDL+G+S+TRWRVGVLGPLKF CRLNCHLRF+PRNG+++ APCSSK 
Subjt:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD

Query:  K
        K
Subjt:  K

A0A6J1FEV3 uncharacterized protein LOC1114434373.0e-9286.07Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICA IAVAVIIAGIVIFIGYVTIRP VP+ISVTDG+LDRIR SR  LLE+QMKIVVRAEN+NARA ASFS +DFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF

Query:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD
        DGI+IASLVA R FKVNKMSYLDLHFLVESSAIPL+P QMQHL+WSL RNLMQFDL+G+S+TRWRVGVLGPLKF C LNC LRFYPRNG++I APCSSKD
Subjt:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD

Query:  K
        K
Subjt:  K

A0A6J1FL61 uncharacterized protein LOC1114462471.4e-9789.55Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICAAIA+AVIIAGIVIFIGYVTIRPRVPTISVTDG+LDRIR SRT LLE+QMKIVVRAEN+NARAHASFS +DFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIF

Query:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD
        DGI+IASLVA R FKVNKMSYLDLHFLVESSAIPL+PTQMQHL WSLKRNLMQFDL+G+S+TRWRVGVLGPLKF CRLNCHLRFYPRNG++I APCSS+D
Subjt:  DGIQIASLVARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKD

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13050.1 unknown protein1.2e-0825.26Show/hide
Query:  RHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIFDGIQIASLVA
        + T P+   A I CA + + +I++G+++ + Y+  RPR P   ++   L+   +    +L   + +VV   N + ++   FS   F L F    IA+   
Subjt:  RHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIFDGIQIASLVA

Query:  RRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRF-YPRNGTFIHAPCSSK
           F V K   +   F + SS + +   Q Q L   L    +  +LRGT   R  +G L    +     C +    P  GT     C++K
Subjt:  RRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRF-YPRNGTFIHAPCSSK

AT1G13050.2 unknown protein1.3e-0725.41Show/hide
Query:  AGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIFDGIQIASLVARRAFKVNKM
        A I CA + + +I++G+++ + Y+  RPR P   ++   L+   +    +L   + +VV   N + ++   FS   F L F    IA+      F V K 
Subjt:  AGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIFDGIQIASLVARRAFKVNKM

Query:  SYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRF-YPRNGTFIHAPCSSK
          +   F + SS + +   Q Q L   L    +  +LRGT   R  +G L    +     C +    P  GT     C++K
Subjt:  SYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRF-YPRNGTFIHAPCSSK

AT5G45320.1 FUNCTIONS IN: molecular_function unknown4.2e-4647.92Show/hide
Query:  RH-THPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIFDGIQIASLV
        RH T P IW A IICA I++ VI+ GI++F+GY+ I PRVP ISV D +LD ++     +L+ Q+ IV+R EN NA+AHA F E++F L ++G  IA L 
Subjt:  RH-THPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIFDGIQIASLV

Query:  ARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKDK
        A   F+V K   + L +LV+S  IPL+PT MQ +++++K++++ F+L+G S+TRWRVG LG +KF C L+C LRF P + ++I +PC+S  K
Subjt:  ARRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACCAAATTTCCTATCCAGTCTAAAGCGCCACACTCATCCGCTGATTTGGATCGCAGGCATAATCTGCGCAGCCATAGCCGTAGCAGTGATAATCGCAGGCATCGT
AATCTTCATCGGCTATGTAACGATCCGCCCTAGGGTTCCTACCATCAGCGTGACCGACGGAAATCTAGACAGGATCCGAGTGAGTAGAACGAACTTACTTGAGATCCAGA
TGAAGATCGTGGTCCGAGCAGAGAATCGAAACGCTAGGGCACACGCAAGCTTCTCGGAGAGCGATTTCGTGCTGATCTTCGACGGAATCCAGATCGCGTCGCTGGTGGCT
CGGCGGGCGTTCAAGGTGAACAAGATGAGCTACCTGGATCTGCACTTTCTGGTGGAATCGTCGGCGATTCCGCTGGATCCGACGCAGATGCAGCATCTGAACTGGTCGCT
GAAGAGGAATTTGATGCAGTTCGATCTCAGAGGAACCTCCAAAACTCGATGGCGCGTTGGTGTTCTTGGACCGCTCAAGTTTTTGTGCCGATTGAATTGTCACCTCAGGT
TTTACCCGCGGAATGGAACCTTCATACACGCCCCCTGTTCTTCCAAGGATAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCACCAAATTTCCTATCCAGTCTAAAGCGCCACACTCATCCGCTGATTTGGATCGCAGGCATAATCTGCGCAGCCATAGCCGTAGCAGTGATAATCGCAGGCATCGT
AATCTTCATCGGCTATGTAACGATCCGCCCTAGGGTTCCTACCATCAGCGTGACCGACGGAAATCTAGACAGGATCCGAGTGAGTAGAACGAACTTACTTGAGATCCAGA
TGAAGATCGTGGTCCGAGCAGAGAATCGAAACGCTAGGGCACACGCAAGCTTCTCGGAGAGCGATTTCGTGCTGATCTTCGACGGAATCCAGATCGCGTCGCTGGTGGCT
CGGCGGGCGTTCAAGGTGAACAAGATGAGCTACCTGGATCTGCACTTTCTGGTGGAATCGTCGGCGATTCCGCTGGATCCGACGCAGATGCAGCATCTGAACTGGTCGCT
GAAGAGGAATTTGATGCAGTTCGATCTCAGAGGAACCTCCAAAACTCGATGGCGCGTTGGTGTTCTTGGACCGCTCAAGTTTTTGTGCCGATTGAATTGTCACCTCAGGT
TTTACCCGCGGAATGGAACCTTCATACACGCCCCCTGTTCTTCCAAGGATAAGTAA
Protein sequenceShow/hide protein sequence
MPPNFLSSLKRHTHPLIWIAGIICAAIAVAVIIAGIVIFIGYVTIRPRVPTISVTDGNLDRIRVSRTNLLEIQMKIVVRAENRNARAHASFSESDFVLIFDGIQIASLVA
RRAFKVNKMSYLDLHFLVESSAIPLDPTQMQHLNWSLKRNLMQFDLRGTSKTRWRVGVLGPLKFLCRLNCHLRFYPRNGTFIHAPCSSKDK