; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013186 (gene) of Chayote v1 genome

Gene IDSed0013186
OrganismSechium edule (Chayote v1)
DescriptionMethionyl-tRNA synthetase
Genome locationLG09:40567989..40568228
RNA-Seq ExpressionSed0013186
SyntenySed0013186
Gene Ontology termsGO:0006810 - transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4271994.1 unnamed protein product [Prunus armeniaca]3.5e-1455.93Show/hide
Query:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRLV
        + +++E VVGKRG  + CPYCGGPV+AW+ D    FCF PISHK   + YC +CS RLV
Subjt:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRLV

EXC44891.1 hypothetical protein L484_001137 [Morus notabilis]5.0e-1354.1Show/hide
Query:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPI--SHKPSTQLYCALCSTRLV
        +  ++E V+GK+G  + CPYCGGPV+AW+ D    FCF PI  SHK  T+ YC +CSTRLV
Subjt:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPI--SHKPSTQLYCALCSTRLV

EXC44892.1 hypothetical protein L484_001138 [Morus notabilis]1.3e-1356.67Show/hide
Query:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHK-PSTQLYCALCSTRLV
        +  ++E V+GKRG  + CPYCGGPV+AW+ D    FCF PISHK   T+ YC +CSTRLV
Subjt:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHK-PSTQLYCALCSTRLV

KAB2613256.1 hypothetical protein D8674_035572 [Pyrus ussuriensis x Pyrus communis]1.7e-1352.54Show/hide
Query:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRLV
        + +++E VVGK+G  + CPYCGGPV+ W+ D    FCF PISHK   + YC +CS+RLV
Subjt:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRLV

RXH89041.1 hypothetical protein DVH24_000640 [Malus domestica]6.5e-1351.72Show/hide
Query:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRL
        + +++E VVGK+G  + CPYCGGPV+ W+ D    FCF PISHK   + YC +CS+RL
Subjt:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRL

TrEMBL top hitse value%identityAlignment
A0A5N5GCS6 Uncharacterized protein8.3e-1452.54Show/hide
Query:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRLV
        + +++E VVGK+G  + CPYCGGPV+ W+ D    FCF PISHK   + YC +CS+RLV
Subjt:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRLV

A0A6J5U9D5 Uncharacterized protein1.7e-1455.93Show/hide
Query:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRLV
        + +++E VVGKRG  + CPYCGGPV+AW+ D    FCF PISHK   + YC +CS RLV
Subjt:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRLV

M5WY77 Uncharacterized protein3.2e-1354.24Show/hide
Query:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRLV
        + +++E VVGKRG  + CPYCGGPV+AW+ D    FCF  ISHK   + YC +CS RLV
Subjt:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRLV

W9SE43 Uncharacterized protein2.4e-1354.1Show/hide
Query:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPI--SHKPSTQLYCALCSTRLV
        +  ++E V+GK+G  + CPYCGGPV+AW+ D    FCF PI  SHK  T+ YC +CSTRLV
Subjt:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPI--SHKPSTQLYCALCSTRLV

W9SEJ6 Uncharacterized protein6.4e-1456.67Show/hide
Query:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHK-PSTQLYCALCSTRLV
        +  ++E V+GKRG  + CPYCGGPV+AW+ D    FCF PISHK   T+ YC +CSTRLV
Subjt:  ILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHK-PSTQLYCALCSTRLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29905.1 unknown protein1.8e-0535.29Show/hide
Query:  VGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRLV
        +G++     CPYCGG V A +++ ++ FCF P+  K   +  C+ C   LV
Subjt:  VGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTGGGGGTGGAATATTGGAGATGAAAGAGAACGTGGTTGGAAAGAGAGGGATAAAATCAGGGTGTCCATACTGCGGCGGTCCGGTCATTGCTTGGGAAATGGA
TGTACGCTTCTCCTTCTGCTTCTTCCCCATTTCTCACAAACCCAGCACACAGCTCTACTGCGCTCTATGCTCCACACGCCTCGTTTGTTCCAAATCAACATCCACATCCA
CATCCACATCCAAACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTGGGGGTGGAATATTGGAGATGAAAGAGAACGTGGTTGGAAAGAGAGGGATAAAATCAGGGTGTCCATACTGCGGCGGTCCGGTCATTGCTTGGGAAATGGA
TGTACGCTTCTCCTTCTGCTTCTTCCCCATTTCTCACAAACCCAGCACACAGCTCTACTGCGCTCTATGCTCCACACGCCTCGTTTGTTCCAAATCAACATCCACATCCA
CATCCACATCCAAACCCTAA
Protein sequenceShow/hide protein sequence
MGFGGGILEMKENVVGKRGIKSGCPYCGGPVIAWEMDVRFSFCFFPISHKPSTQLYCALCSTRLVCSKSTSTSTSTSKP