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Sed0013252 (gene) of Chayote v1 genome

Gene IDSed0013252
OrganismSechium edule (Chayote v1)
DescriptionCLAVATA3/ESR-RELATED
Genome locationLG12:30560889..30561576
RNA-Seq ExpressionSed0013252
SyntenySed0013252
Gene Ontology termsNA
InterPro domainsIPR038821 - CLE-related protein 45-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587538.1 hypothetical protein SDJN03_16103, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2670.65Show/hide
Query:  LLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKWVAFKSPMIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK
        +L++KAL+F + L G S+ +QPQTASGL++IDLALKWVAFKSP+  TH  DSVKK  MK M+L APSPAM FDPNQS+KRGVKKGSDPIHN+
Subjt:  LLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKWVAFKSPMIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK

KAG6589506.1 hypothetical protein SDJN03_14929, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2571.13Show/hide
Query:  MGFLLNSKALIFIIFLTGFSM-FLQPQTASGLSSIDLALKWVAFKSPMIYTHKA-DSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK
        MGFL   K L F+  L GF    LQPQTASGL++ID+ALKWVAFKSP I+THKA DS KK NMK MN+ APSPAM+FDPNQS+KR VKKGSDPIHN+
Subjt:  MGFLLNSKALIFIIFLTGFSM-FLQPQTASGLSSIDLALKWVAFKSPMIYTHKA-DSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK

KGN63668.1 hypothetical protein Csa_014085 [Cucumis sativus]3.8e-1862Show/hide
Query:  MGFLLNSKALIFIIFLTGFSMFL---QPQ-TASGLSSIDLALKWVAFKSP-MIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK
        MG L + K L F+  +  F + +   QPQ TA+GLS+ID ALKWVAFKS   I THKADS  +   K +NLAAPSPAM+FDPNQS+KRGVKKGSDPIHN+
Subjt:  MGFLLNSKALIFIIFLTGFSMFL---QPQ-TASGLSSIDLALKWVAFKSP-MIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK

OMP04794.1 hypothetical protein COLO4_09292 [Corchorus olitorius]2.5e-0946.94Show/hide
Query:  MGFLLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKWVAFKSPMIYTH---KADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK
        MGF +N   L+ +  ++   + LQP+  SGL SIDLAL+W     P +      KAD+       + +L APSP+M FDPNQSDKR V+KGSDPIHN+
Subjt:  MGFLLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKWVAFKSPMIYTH---KADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK

PQQ10203.1 hypothetical protein Pyn_16404 [Prunus yedoensis var. nudiflora]1.9e-0945.83Show/hide
Query:  MGFLLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKW-VAFKSPMIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK
        MGFL    A++F+    GF + LQP+  SGL S+DLAL+W     S +   H  ++V   +++     AP+P+M+FDPNQS+KR V+KGSDPIHN+
Subjt:  MGFLLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKW-VAFKSPMIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK

TrEMBL top hitse value%identityAlignment
A0A0A0LPD5 Uncharacterized protein1.8e-1862Show/hide
Query:  MGFLLNSKALIFIIFLTGFSMFL---QPQ-TASGLSSIDLALKWVAFKSP-MIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK
        MG L + K L F+  +  F + +   QPQ TA+GLS+ID ALKWVAFKS   I THKADS  +   K +NLAAPSPAM+FDPNQS+KRGVKKGSDPIHN+
Subjt:  MGFLLNSKALIFIIFLTGFSMFL---QPQ-TASGLSSIDLALKWVAFKSP-MIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK

A0A1R3KCL9 Uncharacterized protein1.2e-0946.94Show/hide
Query:  MGFLLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKWVAFKSPMIYTH---KADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK
        MGF +N   L+ +  ++   + LQP+  SGL SIDLAL+W     P +      KAD+       + +L APSP+M FDPNQSDKR V+KGSDPIHN+
Subjt:  MGFLLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKWVAFKSPMIYTH---KADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK

A0A314XM06 Uncharacterized protein2.0e-0945.83Show/hide
Query:  MGFLLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKW-VAFKSPMIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK
        MGFL    A++F+    GF + LQP+  SGL S+DLAL+W     S +   H   +V   +++     AP+P+M+FDPNQS+KR V+KGSDPIHN+
Subjt:  MGFLLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKW-VAFKSPMIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK

A0A314YU30 Uncharacterized protein9.1e-1045.83Show/hide
Query:  MGFLLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKW-VAFKSPMIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK
        MGFL    A++F+    GF + LQP+  SGL S+DLAL+W     S +   H  ++V   +++     AP+P+M+FDPNQS+KR V+KGSDPIHN+
Subjt:  MGFLLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKW-VAFKSPMIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK

M5WYZ5 Uncharacterized protein2.0e-0945.83Show/hide
Query:  MGFLLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKW-VAFKSPMIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK
        MGFL    A++F+    GF + LQP+  SGL S+DLAL+W     S +   H   +V   +++     AP+P+M+FDPNQS+KR V+KGSDPIHN+
Subjt:  MGFLLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKW-VAFKSPMIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTCTTGCTTAACAGTAAAGCTTTGATCTTTATCATTTTTCTTACTGGTTTTTCTATGTTTCTTCAACCTCAAACAGCATCTGGGCTTAGCTCCATTGATCTTGC
TCTCAAATGGGTAGCTTTCAAATCTCCAATGATCTACACCCACAAGGCTGATTCTGTTAAAAAGTTCAACATGAAGAAGATGAACTTGGCAGCTCCATCACCCGCAATGA
GCTTCGACCCGAACCAATCCGACAAACGAGGAGTCAAGAAAGGATCCGACCCGATTCACAACAAAAGAGGAGGAAGCTGA
mRNA sequenceShow/hide mRNA sequence
AAAAGATAAACCCCAATAGCTTAAACTCTCACAGGAATTTGTCATAAACAAAATTGGTTCAAGTTCCTGTCTTGCAAGCCTCAAATTGAGCTCCCCACATTGTTTCTTTG
TTTTCTCTTCAAATTCTTTCAAATCAAAGTGAAATTAGAAAATGGGGTTCTTGCTTAACAGTAAAGCTTTGATCTTTATCATTTTTCTTACTGGTTTTTCTATGTTTCTT
CAACCTCAAACAGCATCTGGGCTTAGCTCCATTGATCTTGCTCTCAAATGGGTAGCTTTCAAATCTCCAATGATCTACACCCACAAGGCTGATTCTGTTAAAAAGTTCAA
CATGAAGAAGATGAACTTGGCAGCTCCATCACCCGCAATGAGCTTCGACCCGAACCAATCCGACAAACGAGGAGTCAAGAAAGGATCCGACCCGATTCACAACAAAAGAG
GAGGAAGCTGATTTCATTTCATTTGATTTCCAACTCCCTTTGTGCTTACTTTTGATTAGTTTCTTGAAAAAGGGGGTTAGTTGAATTTCATATAGATATCATTTTCTTTC
TCCTTTGGTTTTTGCTTGAATTAAATAGGTTCAACAGGTTATTGTATAGTTTTGAAACTTTTTTTTTCCATCTCAGTCACATCAATTTTATATCTTGCTTTAGAATATAG
AACAGGCCATACATCATGTAGTAGAGAG
Protein sequenceShow/hide protein sequence
MGFLLNSKALIFIIFLTGFSMFLQPQTASGLSSIDLALKWVAFKSPMIYTHKADSVKKFNMKKMNLAAPSPAMSFDPNQSDKRGVKKGSDPIHNKRGGS