CuGenDBv2

Gene ID	Sed0013263
Organism	Sechium edule (Chayote v1)
Description	mediator of RNA polymerase II transcription subunit 19a-like
Genome location	LG09:33861501..33867768
RNA-Seq Expression	Sed0013263
Synteny	Sed0013263
Gene Ontology terms	GO:0006777 - Mo-molybdopterin cofactor biosynthetic process (biological process) GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0019008 - molybdopterin synthase complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function) GO:0061798 - GTP 3',8'-cyclase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7025472.1 Mediator of RNA polymerase II transcription subunit 19a, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.7e-108

94.98

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFGQGPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQL+QNPSYPRETNARIQPFD+DILIEAFQLRET
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK
        GPVELP AEKGVPTIPGK KSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKK+KSAHQ+SGA+HSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTAKIEEMGVIKVAG
        K+KHK AKIEEMGVIKVAG
Subjt:  KSKHKTAKIEEMGVIKVAG

XP_022959852.1 mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita moschata]

3.9e-108

95.43

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFGQGPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQL+QNPSYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK
        GPVELP AEKGVPTIPGK KSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKK+KSAHQ+SGA+HSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTAKIEEMGVIKVAG
        K+KHK AKIEEMGVIKVAG
Subjt:  KSKHKTAKIEEMGVIKVAG

XP_023004820.1 mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita maxima]

5.7e-107

94.06

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFGQGPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQL+Q+PSYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK
        GPVELP AEKGVPT+PGK K ESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKK+KSAHQ+SGA+HSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTAKIEEMGVIKVAG
        K+KHK AKIEEMGVIKVAG
Subjt:  KSKHKTAKIEEMGVIKVAG

XP_023513830.1 mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita pepo subsp. pepo]

6.3e-106

94.91

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFGQGPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQL+QNPSYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK
        GPVELP AEKGVPTIPGK KSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKK+KS HQ+SGA+HSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTAKIEEMGVIK
        K+KHK AKIEEMGVIK
Subjt:  KSKHKTAKIEEMGVIK

XP_031744806.1 mediator of RNA polymerase II transcription subunit 19a [Cucumis sativus]

4.8e-106

93.61

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFG+GPRELTGAVDLISH+KL PHH+FFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQL+QN SYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK
        GPV+LPSAEKGVPTIPGK KSESKDKDRKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKKEKS HQ+SGA+HSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTAKIEEMGVIKVAG
        KSKHK +KIEEMGVIKVAG
Subjt:  KSKHKTAKIEEMGVIKVAG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K716 Uncharacterized protein

1.3e-104

93.52

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFG+GPRELTGAVDLISH+KL PHH+FFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQL+QN SYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK
        GPV+LPSAEKGVPTIPGK KSESKDKDRKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKKEKS HQ+SGA+HSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTAKIEEMGVIK
        KSKHK +KIEEMGVIK
Subjt:  KSKHKTAKIEEMGVIK

A0A1S4DWJ4 mediator of RNA polymerase II transcription subunit 19a-like

5.2e-106

93.15

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFG+GPRELTGAVDLISH+KL PHH+FFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQL+QN SYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK
        GPV+LPSAEKGVPTIPGK KSESKDKDRKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKK+KS HQ+SGA+HSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTAKIEEMGVIKVAG
        KSKHK +KIEEMGVIKVAG
Subjt:  KSKHKTAKIEEMGVIKVAG

A0A6J1CP39 mediator of RNA polymerase II transcription subunit 19a-like isoform X2

8.8e-106

93.15

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFG+GPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQL+QN SYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK
        GPV+LP AEKGVPTIPGK KSESKDK+RKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKK++KSAH ESGA+HSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTAKIEEMGVIKVAG
        KSKHKT+KIEEMGVIKVAG
Subjt:  KSKHKTAKIEEMGVIKVAG

A0A6J1H5Q1 mediator of RNA polymerase II transcription subunit 19a-like

1.9e-108

95.43

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFGQGPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQL+QNPSYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK
        GPVELP AEKGVPTIPGK KSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKK+KSAHQ+SGA+HSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTAKIEEMGVIKVAG
        K+KHK AKIEEMGVIKVAG
Subjt:  KSKHKTAKIEEMGVIKVAG

A0A6J1KVN1 mediator of RNA polymerase II transcription subunit 19a-like

2.7e-107

94.06

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFGQGPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQL+Q+PSYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK
        GPVELP AEKGVPT+PGK K ESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKK+KSAHQ+SGA+HSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTAKIEEMGVIKVAG
        K+KHK AKIEEMGVIKVAG
Subjt:  KSKHKTAKIEEMGVIKVAG

SwissProt top hits

e value

%identity

Alignment

Q6NQD9 Probable mediator of RNA polymerase II transcription subunit 19b

1.3e-66

67.13

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSY-PRETNARIQPFDQDILIEAFQLRE
        MESE  KFG GPREL GA+DLI+ +KL PHHEFFCK+SLP S+SD HYLHN+VGDTEIRKGEGMQL+QL+ N S   R+TNARIQPF  D L EAF+L +
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSY-PRETNARIQPFDQDILIEAFQLRE

Query:  TGPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRH
        T PVELP AEKG PT   K KSESKDKDRKH+KHKD+ K+KDREHKKHKH+HKDR KDKDKDK ++K   ++SG      HH+KKRK++G +D +D+ RH
Subjt:  TGPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRH

Query:  KKSKHKTAKIEEMGVI
        KKSKHK++K++EMG +
Subjt:  KKSKHKTAKIEEMGVI

Q9FMP0 Mediator of RNA polymerase II transcription subunit 19a

7.2e-81

73.54

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET
        ME E  KFG GPREL GA DLIS FKL  HHEFFCKKSLP+S+SD+HYLHNVVGDTEIRKGEGMQL+QL+++ S  RETN RIQPFD D L E+FQL + 
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDK----KKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDI
         PVELP AEKG PTIP K KSESKD+DRKHKKHKDRDKDKDREHKKHKH+HKDRSKDKDKDK    KK+K+ H +SG +HSKKHH+KKRKHDG++D+ND+
Subjt:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDK----KKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDI

Query:  HRHKKSKHKTAKIEEMGVIKVAG
         RHKK+KHK++K++E+G I+VAG
Subjt:  HRHKKSKHKTAKIEEMGVIKVAG

Arabidopsis top hits

e value

%identity

Alignment

AT5G12230.1 MED19A

5.1e-82

73.54

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET
        ME E  KFG GPREL GA DLIS FKL  HHEFFCKKSLP+S+SD+HYLHNVVGDTEIRKGEGMQL+QL+++ S  RETN RIQPFD D L E+FQL + 
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDK----KKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDI
         PVELP AEKG PTIP K KSESKD+DRKHKKHKDRDKDKDREHKKHKH+HKDRSKDKDKDK    KK+K+ H +SG +HSKKHH+KKRKHDG++D+ND+
Subjt:  GPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDK----KKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDI

Query:  HRHKKSKHKTAKIEEMGVIKVAG
         RHKK+KHK++K++E+G I+VAG
Subjt:  HRHKKSKHKTAKIEEMGVIKVAG

AT5G19480.1 unknown protein

9.4e-68

67.13

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSY-PRETNARIQPFDQDILIEAFQLRE
        MESE  KFG GPREL GA+DLI+ +KL PHHEFFCK+SLP S+SD HYLHN+VGDTEIRKGEGMQL+QL+ N S   R+TNARIQPF  D L EAF+L +
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSY-PRETNARIQPFDQDILIEAFQLRE

Query:  TGPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRH
        T PVELP AEKG PT   K KSESKDKDRKH+KHKD+ K+KDREHKKHKH+HKDR KDKDKDK ++K   ++SG      HH+KKRK++G +D +D+ RH
Subjt:  TGPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRH

Query:  KKSKHKTAKIEEMGVI
        KKSKHK++K++EMG +
Subjt:  KKSKHKTAKIEEMGVI

AT5G19480.2 unknown protein

9.4e-68

67.13

Show/hide

Query:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSY-PRETNARIQPFDQDILIEAFQLRE
        MESE  KFG GPREL GA+DLI+ +KL PHHEFFCK+SLP S+SD HYLHN+VGDTEIRKGEGMQL+QL+ N S   R+TNARIQPF  D L EAF+L +
Subjt:  MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSY-PRETNARIQPFDQDILIEAFQLRE

Query:  TGPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRH
        T PVELP AEKG PT   K KSESKDKDRKH+KHKD+ K+KDREHKKHKH+HKDR KDKDKDK ++K   ++SG      HH+KKRK++G +D +D+ RH
Subjt:  TGPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRH

Query:  KKSKHKTAKIEEMGVI
        KKSKHK++K++EMG +
Subjt:  KKSKHKTAKIEEMGVI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAATCTGAAGACAAGAAGTTTGGCCAAGGACCTAGGGAATTGACTGGTGCTGTGGATCTTATAAGTCACTTCAAGCTGTTTCCCCATCATGAGTTCTTCTGCAAGAA
GTCACTTCCATTGTCAATTTCGGACACACATTATCTTCATAACGTGGTTGGAGACACAGAAATTAGAAAAGGGGAAGGAATGCAGTTGAATCAACTCCTACAGAATCCGT
CTTACCCTAGAGAGACTAATGCCCGCATACAGCCATTTGACCAAGACATTCTCATAGAAGCCTTCCAACTGCGGGAAACTGGTCCTGTTGAGCTGCCTTCTGCCGAGAAG
GGCGTTCCTACTATTCCAGGGAAGTTGAAAAGTGAGTCCAAAGATAAAGACAGAAAGCATAAGAAGCACAAAGATAGGGATAAGGATAAGGATAGAGAGCATAAGAAGCA
CAAGCATCGACATAAAGACCGAAGCAAAGATAAAGACAAGGATAAGAAGAAAGAAAAAAGTGCCCATCAAGAATCCGGTGCTGAACATTCAAAGAAGCATCACGAAAAGA
AAAGGAAGCATGATGGAGAAGACGATATTAATGACATTCATAGGCACAAAAAAAGTAAGCATAAAACCGCAAAAATTGAAGAAATGGGAGTGATAAAGGTAGCGGGCTGA

mRNA sequence

Show/hide mRNA sequence

GGCAAAGGGTTATTTGTACTCTTCTCTTCCCCCGATCTCAATTTCCCCTCCCTCTCTCCTCCGCCGTTCACGGCCGCCGGAGCTGCCCCTTCACTCCCCTCACACCCCCT
TCTCCGCCCGATTCTCCGCTCAATTTCATCTCATTCTTCGATTCGATCCTCTCAAACCCTATTCCTCGATCGCGCTCTCGATTTCCTCCCATTTTCCGGCGCCTCTTCGC
CGTCTTCTTCTTCCCTTCGCCGCCGAGCGATAATAATGTTACATTGTTCCAAGGAAGAGTGATACATGGAATCTGAAGACAAGAAGTTTGGCCAAGGACCTAGGGAATTG
ACTGGTGCTGTGGATCTTATAAGTCACTTCAAGCTGTTTCCCCATCATGAGTTCTTCTGCAAGAAGTCACTTCCATTGTCAATTTCGGACACACATTATCTTCATAACGT
GGTTGGAGACACAGAAATTAGAAAAGGGGAAGGAATGCAGTTGAATCAACTCCTACAGAATCCGTCTTACCCTAGAGAGACTAATGCCCGCATACAGCCATTTGACCAAG
ACATTCTCATAGAAGCCTTCCAACTGCGGGAAACTGGTCCTGTTGAGCTGCCTTCTGCCGAGAAGGGCGTTCCTACTATTCCAGGGAAGTTGAAAAGTGAGTCCAAAGAT
AAAGACAGAAAGCATAAGAAGCACAAAGATAGGGATAAGGATAAGGATAGAGAGCATAAGAAGCACAAGCATCGACATAAAGACCGAAGCAAAGATAAAGACAAGGATAA
GAAGAAAGAAAAAAGTGCCCATCAAGAATCCGGTGCTGAACATTCAAAGAAGCATCACGAAAAGAAAAGGAAGCATGATGGAGAAGACGATATTAATGACATTCATAGGC
ACAAAAAAAGTAAGCATAAAACCGCAAAAATTGAAGAAATGGGAGTGATAAAGGTAGCGGGCTGACATTGTGGAATAATCTAGGTCATTTATTTCCTCGTATGGTTGTAG
AAAGATTGGTGGAATTTTCACTTAATGTTGTCAAAAAGTGCTTGAGAGTAGCTTCTGATGAGGGTGAATTTACCAGTATTAGGGTTTGGAAAGCAAATGTAAAAAAAATG
GTGGAATTGAACTTTTGTATCATAATAAACTCTGGTCTGATATATGAATTTGAGCAATTTGCAGGACTGGTTGTTTTCAGCTTTCCTCATGTAACATCATATTCATTTTT
CGGGTTCTAGACCTATTTCGAGTTATAGTTTGATGAAGTAGCATTCTTCGTCTTCGGTATTTCGAACGAAGGTAAAAGGCTAGAAATTCTCTCTAGATCTCCTCATTTTC
TCTCTCCCTCCACCCCGCCTCGTCGTATTTCTTCAACTATATTCTTTTGACCTAAC

Protein sequence

Show/hide protein sequence

MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEK
GVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIKVAG

Sed0013263 (gene) of Chayote v1 genome