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Sed0013265 (gene) of Chayote v1 genome

Gene IDSed0013265
OrganismSechium edule (Chayote v1)
DescriptionTransposase, MuDR, plant
Genome locationLG01:10198690..10200725
RNA-Seq ExpressionSed0013265
SyntenySed0013265
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3955287.1 hypothetical protein CMV_019481 [Castanea mollissima]1.9e-0532.11Show/hide
Query:  LFEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFKLYGRDPTED--AGGYNILESNDEVEALKSLLSDGMPFEVFVEHE
        LF + VHHGG F + P  KY+  KVD   N + + WS ++   + ++ GY  +  +L+ + P+ D     ++++  +D+V  +  L+       VFVEH 
Subjt:  LFEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFKLYGRDPTED--AGGYNILESNDEVEALKSLLSDGMPFEVFVEHE

Query:  VDNGLSDDE
        VDN +  DE
Subjt:  VDNGLSDDE

KAG4969681.1 hypothetical protein JHK85_036102 [Glycine max]4.7e-0427.55Show/hide
Query:  FEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFKLYGR--DPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEH
        F +++HH G F    ++ YI +  D  YN ++++WS  + + +V  LGY+   FKL+ +  D   + G   I+E    +E  K  +   +   ++V+H
Subjt:  FEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFKLYGR--DPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEH

KRH18383.1 hypothetical protein GLYMA_13G055900v4 [Glycine max]4.7e-0427.55Show/hide
Query:  FEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFKLYGR--DPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEH
        F +++HH G F    ++ YI +  D  YN ++++WS  + + +V  LGY+   FKL+ +  D   + G   I+E    +E  K  +   +   ++V+H
Subjt:  FEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFKLYGR--DPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEH

OMO77108.1 Transposase, MuDR, plant [Corchorus olitorius]5.5e-0533Show/hide
Query:  TLFEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFK--LYGRDPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEH
        T++E+ VHHGGV VD P+I+Y++ K   F  Y+ E   L   ++L  + GY  N  K   + R       G  +L  +D V +L   L +      +VEH
Subjt:  TLFEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFK--LYGRDPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEH

XP_022153708.1 uncharacterized protein LOC111021158 [Momordica charantia]2.9e-2253.4Show/hide
Query:  MTLFEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFKLYGRDPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEHE
        MT F V VHH G F+  P IKYIS KVD + N++ + WS  + I +VE LGY  +Y KL+GRDPT++ GGY ++ES+ +V  L SLLSDGM FE++VEHE
Subjt:  MTLFEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFKLYGRDPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEHE

Query:  VDN
         ++
Subjt:  VDN

TrEMBL top hitse value%identityAlignment
A0A0R0GVI9 Uncharacterized protein2.3e-0427.55Show/hide
Query:  FEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFKLYGR--DPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEH
        F +++HH G F    ++ YI +  D  YN ++++WS  + + +V  LGY+   FKL+ +  D   + G   I+E    +E  K  +   +   ++V+H
Subjt:  FEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFKLYGR--DPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEH

A0A1R3I3F5 Transposase, MuDR, plant2.7e-0533Show/hide
Query:  TLFEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFK--LYGRDPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEH
        T++E+ VHHGGV VD P+I+Y++ K   F  Y+ E   L   ++L  + GY  N  K   + R       G  +L  +D V +L   L +      +VEH
Subjt:  TLFEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFK--LYGRDPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEH

A0A6J1DI69 uncharacterized protein LOC1110211581.4e-2253.4Show/hide
Query:  MTLFEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFKLYGRDPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEHE
        MT F V VHH G F+  P IKYIS KVD + N++ + WS  + I +VE LGY  +Y KL+GRDPT++ GGY ++ES+ +V  L SLLSDGM FE++VEHE
Subjt:  MTLFEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFKLYGRDPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEHE

Query:  VDN
         ++
Subjt:  VDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTGTTTGAAGTAATAGTACATCATGGTGGGGTTTTTGTTGACGGACCAAATATCAAATATATTTCAAGCAAGGTGGATCACTTTTATAATTACAATTTAGAATC
GTGGTCATTGTCAAAATGTATCAATCTGGTTGAGAATCTAGGTTACGCTGCCAATTATTTTAAATTATATGGTAGAGATCCTACCGAGGATGCTGGTGGTTACAATATTT
TAGAAAGTAACGATGAAGTAGAGGCATTGAAGAGTTTATTAAGTGATGGAATGCCATTTGAAGTGTTTGTAGAGCACGAAGTCGACAATGGTTTGTCGGATGATGAAAAT
TTTAACTTTAGATAG
mRNA sequenceShow/hide mRNA sequence
GAAAATTCACCATCGCTAGAATCTCGAAGCTTCTCTAATTGCTGCGTGCTAGGTTTGATTGTGTTGAACCTAGTGAACAACTATAAATAGTATGACTTTGTTTGAAGTAA
TAGTACATCATGGTGGGGTTTTTGTTGACGGACCAAATATCAAATATATTTCAAGCAAGGTGGATCACTTTTATAATTACAATTTAGAATCGTGGTCATTGTCAAAATGT
ATCAATCTGGTTGAGAATCTAGGTTACGCTGCCAATTATTTTAAATTATATGGTAGAGATCCTACCGAGGATGCTGGTGGTTACAATATTTTAGAAAGTAACGATGAAGT
AGAGGCATTGAAGAGTTTATTAAGTGATGGAATGCCATTTGAAGTGTTTGTAGAGCACGAAGTCGACAATGGTTTGTCGGATGATGAAAATTTTAACTTTAGATAGTTTT
TGTGAGTTTGCGAGTGACGATATAGAGGATTTTGAAGTAGAATGATGCAGAATCGTAACTTTGAGTGATAGGAAACAAAAAGATGCAAGAACAGGTGAAAATTCTATGTA
TGAGGAAGATATTGGAAGTGATTTAAACTTAGACTCGGAAGAGCTACACTCATTAGCTGACTCGTCTGATTCGAACCAATGATATGAGAGTAAGATGAAGTTTCCATCTT
TCAAGCAAGACATGGAAGAAAATAG
Protein sequenceShow/hide protein sequence
MTLFEVIVHHGGVFVDGPNIKYISSKVDHFYNYNLESWSLSKCINLVENLGYAANYFKLYGRDPTEDAGGYNILESNDEVEALKSLLSDGMPFEVFVEHEVDNGLSDDEN
FNFR