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Sed0013294 (gene) of Chayote v1 genome

Gene IDSed0013294
OrganismSechium edule (Chayote v1)
Descriptionsuccinate dehydrogenase subunit 7B, mitochondrial-like
Genome locationLG08:879791..883615
RNA-Seq ExpressionSed0013294
SyntenySed0013294
Gene Ontology termsGO:0005749 - mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (cellular component)
GO:0043495 - protein membrane anchor (molecular function)
InterPro domainsIPR034573 - Succinate dehydrogenase subunit 7, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587488.1 Succinate dehydrogenase subunit 7B, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3888.89Show/hide
Query:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA
        MAFLLNKT +AS FRSQSQVDPSSLSRR FHVEPGTREKALLAE P LRRFRSHKK VS IKK+GDVLTIVVVAGCCYEIYVKATMREEARQAKTAS +
Subjt:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA

XP_022921345.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita moschata]2.3e-3785Show/hide
Query:  TMAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA
        TMAFLL KT +ASHFRSQSQVDPSS SRR FH+EPGTREKALLAE P LRRFRSHKK V+ IKK+GDVLTIVVVAGCCYEIYVKATMREEARQAK AS +
Subjt:  TMAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA

XP_022933942.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita moschata]1.8e-3787.88Show/hide
Query:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA
        MAFLLNKT +AS FRSQSQVDPSSLSRR FHVEPGTREKALLAE P LRRFRSHKK VS IKK+GDVLTIVVVAGCCYEIYVKATMREEARQA TAS +
Subjt:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA

XP_022969157.1 succinate dehydrogenase subunit 7A, mitochondrial-like [Cucurbita maxima]4.6e-3886.87Show/hide
Query:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA
        MAFLLNKT +ASHFRSQSQ DPS+LSRR FHVEPGTREKALLAE P LRRFRSHKK VS IKK+GDVLTIVVVAGCCYEIYV+ATMREEARQAKTAS +
Subjt:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA

XP_023529214.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita pepo subsp. pepo]5.5e-3989.9Show/hide
Query:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA
        MAFLLNKT  ASHFRSQSQVDPSSLSRR FHVEPGTREKALLAE P LRRFRSHKK VS IKK+GDVLTIVVVAGCCYEIYVKATMREEARQAKTAS +
Subjt:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA

TrEMBL top hitse value%identityAlignment
A0A0A0LUC0 Uncharacterized protein3.2e-3788.54Show/hide
Query:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEA-RQAKT
        MAF LNK+ +ASHFRSQSQVDPSSLSRR FHVEPGTREKALLAE PCLRRFRSHKK+VS +K+VGDVLTIVVVAGCCYEIYVKATMREEA RQAKT
Subjt:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEA-RQAKT

A0A6J1C1M2 succinate dehydrogenase subunit 7B, mitochondrial-like1.5e-3784.85Show/hide
Query:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA
        MAF LN+T +ASHFRSQSQ DPSSLSRR FHVEPGTREKALLAE P LRRFRSHKK VS IK++GD+LTIVVVAGCCYEIYVKATMREEARQAKTAS +
Subjt:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA

A0A6J1E5D6 succinate dehydrogenase subunit 7B, mitochondrial-like1.1e-3785Show/hide
Query:  TMAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA
        TMAFLL KT +ASHFRSQSQVDPSS SRR FH+EPGTREKALLAE P LRRFRSHKK V+ IKK+GDVLTIVVVAGCCYEIYVKATMREEARQAK AS +
Subjt:  TMAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA

A0A6J1F188 succinate dehydrogenase subunit 7B, mitochondrial-like8.5e-3887.88Show/hide
Query:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA
        MAFLLNKT +AS FRSQSQVDPSSLSRR FHVEPGTREKALLAE P LRRFRSHKK VS IKK+GDVLTIVVVAGCCYEIYVKATMREEARQA TAS +
Subjt:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA

A0A6J1HVK4 succinate dehydrogenase subunit 7A, mitochondrial-like2.2e-3886.87Show/hide
Query:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA
        MAFLLNKT +ASHFRSQSQ DPS+LSRR FHVEPGTREKALLAE P LRRFRSHKK VS IKK+GDVLTIVVVAGCCYEIYV+ATMREEARQAKTAS +
Subjt:  MAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTASSA

SwissProt top hitse value%identityAlignment
Q3E870 Succinate dehydrogenase subunit 7B, mitochondrial1.0e-2765Show/hide
Query:  MAFLLNKTKIASHFRSQSQV---DPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTAS
        MAFLLN   I+SH RS S     D  S+SRR FH+EPGTREKALLAE   L+RF+SHKKSV  +K++GDVLT+VVVAGCCYEIYVKA M++EA  A  +S
Subjt:  MAFLLNKTKIASHFRSQSQV---DPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTAS

Q6H611 Succinate dehydrogenase subunit 7, mitochondrial1.6e-0956.9Show/hide
Query:  RRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKA
        RR FHVE G REKALL E   L+RF+S+K SV  + KVG++LT VV+  C YEI   A
Subjt:  RRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKA

Q9C5E8 Succinate dehydrogenase subunit 7A, mitochondrial4.4e-2365.26Show/hide
Query:  MAFLLNKTKIASHFRSQSQVDPSSL--SRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQA
        MAFLLN T I+SH RS SQ    +L  SRR FHVE G REKALLAE   LRRF+SHKK V  +K++GDVLT+VVVAGCCYEIY +  MR+EA+ A
Subjt:  MAFLLNKTKIASHFRSQSQVDPSSL--SRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQA

Arabidopsis top hitse value%identityAlignment
AT3G47833.1 unknown protein3.1e-2465.26Show/hide
Query:  MAFLLNKTKIASHFRSQSQVDPSSL--SRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQA
        MAFLLN T I+SH RS SQ    +L  SRR FHVE G REKALLAE   LRRF+SHKK V  +K++GDVLT+VVVAGCCYEIY +  MR+EA+ A
Subjt:  MAFLLNKTKIASHFRSQSQVDPSSL--SRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQA

AT5G62575.1 unknown protein5.5e-2965.66Show/hide
Query:  MAFLLNKTKIASHFRSQSQV--DPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTAS
        MAFLLN   I+SH RS S    D  S+SRR FH+EPGTREKALLAE   L+RF+SHKKSV  +K++GDVLT+VVVAGCCYEIYVKA M++EA  A  +S
Subjt:  MAFLLNKTKIASHFRSQSQV--DPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTAS

AT5G62575.2 unknown protein7.1e-2965Show/hide
Query:  MAFLLNKTKIASHFRSQSQV---DPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTAS
        MAFLLN   I+SH RS S     D  S+SRR FH+EPGTREKALLAE   L+RF+SHKKSV  +K++GDVLT+VVVAGCCYEIYVKA M++EA  A  +S
Subjt:  MAFLLNKTKIASHFRSQSQV---DPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEIYVKATMREEARQAKTAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAAAAAAAAGAAAAAAAAAACTTTACCATATTTGTGCCTGATCTCACAAACCTGTTCTGTTTTCGATCTCGCACTCAAGAAACAATGGCGTTTTTGCTTAACAA
AACCAAAATCGCCTCGCATTTTCGATCTCAATCCCAGGTGGATCCTTCGTCACTTTCGCGCCGCAGATTCCATGTCGAACCAGGAACTCGTGAAAAGGCTTTATTAGCTG
AGGCTCCTTGTCTTAGGCGGTTCAGATCACACAAGAAGAGTGTCTCTCTTATAAAAAAAGTTGGAGATGTTCTGACAATCGTGGTTGTTGCAGGATGTTGCTATGAAATC
TATGTGAAAGCAACTATGCGAGAAGAAGCTCGACAGGCGAAAACTGCTAGCAGTGCAGGATTAAGTGAATTAGTGTCCAGTGACAATTAA
mRNA sequenceShow/hide mRNA sequence
GTGCAAAAAAAATAATGAAAAAAAAAAAAGAAAAAAAAAACTTTACCATATTTGTGCCTGATCTCACAAACCTGTTCTGTTTTCGATCTCGCACTCAAGAAACAATGGCG
TTTTTGCTTAACAAAACCAAAATCGCCTCGCATTTTCGATCTCAATCCCAGGTGGATCCTTCGTCACTTTCGCGCCGCAGATTCCATGTCGAACCAGGAACTCGTGAAAA
GGCTTTATTAGCTGAGGCTCCTTGTCTTAGGCGGTTCAGATCACACAAGAAGAGTGTCTCTCTTATAAAAAAAGTTGGAGATGTTCTGACAATCGTGGTTGTTGCAGGAT
GTTGCTATGAAATCTATGTGAAAGCAACTATGCGAGAAGAAGCTCGACAGGCGAAAACTGCTAGCAGTGCAGGATTAAGTGAATTAGTGTCCAGTGACAATTAAAATGTC
TGGCAATAGTTTCCAATGCTTATGTTATTTATGTGCTAAATAAAGGTTTTTGAAGCACCAAATTCTATTTCCCCCATTTCTGTTAGGTTTTATTAATCATCAATAATATT
TTTTTGACCTGATACTTTGTATCATCCTAAGGGATATCAGAACATTTTTATCATTGTGAGCACCTCTGTATAACCTTATTTTCTATGCTTTTAAGCTTGAAATAGAACTC
ACATGGTGGTGGAAGGTGAGCTGAAATTATTGAAGATGGTGAAAGAGGGGATTTTTATTTAGGCTTGAAAAGTGTGTCTGAGTTTCTTTCTTTAAGGATTAA
Protein sequenceShow/hide protein sequence
MKKKKEKKNFTIFVPDLTNLFCFRSRTQETMAFLLNKTKIASHFRSQSQVDPSSLSRRRFHVEPGTREKALLAEAPCLRRFRSHKKSVSLIKKVGDVLTIVVVAGCCYEI
YVKATMREEARQAKTASSAGLSELVSSDN