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Sed0013305 (gene) of Chayote v1 genome

Gene IDSed0013305
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG02:50071014..50071286
RNA-Seq ExpressionSed0013305
SyntenySed0013305
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049291.1 putative transmembrane protein [Cucumis melo var. makuwa]1.0e-3078.95Show/hide
Query:  MAILVFLLLLQPNAAGRTLHERSPMV-----NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI
        MAIL+ LL LQPN AGRTLHE+ PMV     NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKE+HY A RSTRRP THRRHAA  RVV +L+
Subjt:  MAILVFLLLLQPNAAGRTLHERSPMV-----NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI

KAG6597386.1 hypothetical protein SDJN03_10566, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2263.64Show/hide
Query:  MAILVFLLLLQPNAAGRTLHERSPMV---------NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI
        MA ++ LL L PNAAGRTL E+  MV          LKLQSLQRV VPPSGPSGCTFIPGTNGPGCPL+ +HYA   S +RP T RR+A  VRVV +LI
Subjt:  MAILVFLLLLQPNAAGRTLHERSPMV---------NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI

KAG7018772.1 hypothetical protein SDJN02_20645, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1970.67Show/hide
Query:  LLQPNAAGRTLHERSPMV-------NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTH
        LL PN AGRTLHE   MV        LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K +HY    STRRP  H
Subjt:  LLQPNAAGRTLHERSPMV-------NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTH

KGN56901.1 hypothetical protein Csa_009866 [Cucumis sativus]1.3e-3075.79Show/hide
Query:  MAILVFLLLLQPNAAGRTLHERSPMV-----NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI
        MAIL+ LL LQPN AGRTLHE+ PMV     NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKE+HY A  ST+RP THRR+AA  RVV +L+
Subjt:  MAILVFLLLLQPNAAGRTLHERSPMV-----NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI

TYK17267.1 putative transmembrane protein [Cucumis melo var. makuwa]1.0e-3078.95Show/hide
Query:  MAILVFLLLLQPNAAGRTLHERSPMV-----NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI
        MAIL+ LL LQPN AGRTLHE+ PMV     NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKE+HY A RSTRRP THRRHAA  RVV +L+
Subjt:  MAILVFLLLLQPNAAGRTLHERSPMV-----NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI

TrEMBL top hitse value%identityAlignment
A0A0A0LA00 Uncharacterized protein6.5e-3175.79Show/hide
Query:  MAILVFLLLLQPNAAGRTLHERSPMV-----NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI
        MAIL+ LL LQPN AGRTLHE+ PMV     NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKE+HY A  ST+RP THRR+AA  RVV +L+
Subjt:  MAILVFLLLLQPNAAGRTLHERSPMV-----NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI

A0A5A7U6N3 Putative transmembrane protein5.0e-3178.95Show/hide
Query:  MAILVFLLLLQPNAAGRTLHERSPMV-----NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI
        MAIL+ LL LQPN AGRTLHE+ PMV     NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKE+HY A RSTRRP THRRHAA  RVV +L+
Subjt:  MAILVFLLLLQPNAAGRTLHERSPMV-----NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI

A0A5D3CZY7 Putative transmembrane protein5.0e-3178.95Show/hide
Query:  MAILVFLLLLQPNAAGRTLHERSPMV-----NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI
        MAIL+ LL LQPN AGRTLHE+ PMV     NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKE+HY A RSTRRP THRRHAA  RVV +L+
Subjt:  MAILVFLLLLQPNAAGRTLHERSPMV-----NLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI

A0A5N6QYI5 Uncharacterized protein7.5e-1154.93Show/hide
Query:  MAILVFLLLLQPNAAGRTLHERSPMVNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTR
        M +L+FLL +Q   A R LH      +++LQSLQR  VPPSG SGCT+IPGT GPGCP+KE +YA +   R
Subjt:  MAILVFLLLLQPNAAGRTLHERSPMVNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTR

A0A5N6R1J5 Uncharacterized protein8.9e-1256.34Show/hide
Query:  MAILVFLLLLQPNAAGRTLHERSPMVNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTR
        M +L+FLL +Q   A R LH      +++LQSLQR +VPPSG SGCT+IPGT GPGCP+KE HYA +   R
Subjt:  MAILVFLLLLQPNAAGRTLHERSPMVNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTCTTGTATTTCTTTTGCTGCTTCAGCCAAACGCAGCTGGTCGGACTCTGCATGAGAGGTCACCAATGGTGAATCTGAAGCTGCAGTCTCTTCAAAGGGTCAG
CGTGCCCCCCTCCGGGCCGTCCGGTTGCACCTTCATTCCCGGCACCAACGGCCCCGGCTGTCCCCTCAAAGAGAAGCACTACGCTGCGGAACGTTCGACACGGCGTCCGG
TCACTCACCGACGACATGCTGCCTCTGTTCGTGTGGTGGGGAGTCTTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATTCTTGTATTTCTTTTGCTGCTTCAGCCAAACGCAGCTGGTCGGACTCTGCATGAGAGGTCACCAATGGTGAATCTGAAGCTGCAGTCTCTTCAAAGGGTCAG
CGTGCCCCCCTCCGGGCCGTCCGGTTGCACCTTCATTCCCGGCACCAACGGCCCCGGCTGTCCCCTCAAAGAGAAGCACTACGCTGCGGAACGTTCGACACGGCGTCCGG
TCACTCACCGACGACATGCTGCCTCTGTTCGTGTGGTGGGGAGTCTTATCTGA
Protein sequenceShow/hide protein sequence
MAILVFLLLLQPNAAGRTLHERSPMVNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKEKHYAAERSTRRPVTHRRHAASVRVVGSLI