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Sed0013307 (gene) of Chayote v1 genome

Gene IDSed0013307
OrganismSechium edule (Chayote v1)
DescriptionUBN2_3 domain-containing protein
Genome locationLG09:35438298..35443524
RNA-Seq ExpressionSed0013307
SyntenySed0013307
Gene Ontology termsNA
InterPro domainsIPR029472 - Retrotransposon Copia-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035612.1 No apical meristem (NAM) protein [Cucumis melo var. makuwa]2.8e-0927.16Show/hide
Query:  MNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSS----------------------------------------SVETFFTKMKT-------
        +NPY +HHS   TA +V QPLTGA NY+SW RAM +A+SG +                                        +    +T   T       
Subjt:  MNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSS----------------------------------------SVETFFTKMKT-------

Query:  ---------LWQE----------------------------------------------------LNTCYKIHGYPLGYKPR--NPSINTKNVQNSPINA
                 L QE                                                     + CYK HGYP GYKPR  NP  NT          
Subjt:  ---------LWQE----------------------------------------------------LNTCYKIHGYPLGYKPR--NPSINTKNVQNSPINA

Query:  NVAVAQQPSFFSSLNGDQYTQLLELLNTHVHA
        + A    P FFSSLN +QY+QL+ LLN H+ A
Subjt:  NVAVAQQPSFFSSLNGDQYTQLLELLNTHVHA

KAA0057703.1 putative mitochondrial protein [Cucumis melo var. makuwa]9.8e-0750.75Show/hide
Query:  CYKIHGYPLGYKPRNPSINT----KNVQNSPINANVAVA-QQPSFFSSLNGDQYTQLLELLNTHVHA
        CY  HGYPLGYKPRN +  T     +  N   N N A A   P FFSSLN +QY+QL+ +LN H+ A
Subjt:  CYKIHGYPLGYKPRNPSINT----KNVQNSPINANVAVA-QQPSFFSSLNGDQYTQLLELLNTHVHA

KAA0065480.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]5.8e-0722.7Show/hide
Query:  EAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSS-------------------------------------------------------
        +AQ+NPY +HHS   TA +V+QPLTGA NY SW RAM +A+SG +                                                       
Subjt:  EAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSS-------------------------------------------------------

Query:  -----------------------------SVETFFTKMKTLWQELN------------------------------------------------------
                                     ++ET++TK+KT+WQ LN                                                      
Subjt:  -----------------------------SVETFFTKMKTLWQELN------------------------------------------------------

Query:  ----------------------------------------------------------TCYKIHGYPLGYKPRNP-SINT---KNVQNSPINANVAVA-Q
                                                                   CYK HGYP GYKPRN  SI T    +  N+  N N A A +
Subjt:  ----------------------------------------------------------TCYKIHGYPLGYKPRNP-SINT---KNVQNSPINANVAVA-Q

Query:  QPSFFSSLNGDQYTQLLELLNTHVHA
         P FFSSLN +QY+QL+ LLN H+ A
Subjt:  QPSFFSSLNGDQYTQLLELLNTHVHA

XP_008463248.1 PREDICTED: uncharacterized protein LOC103501452 [Cucumis melo]9.8e-0750.75Show/hide
Query:  CYKIHGYPLGYKPRNPSINT----KNVQNSPINANVAVA-QQPSFFSSLNGDQYTQLLELLNTHVHA
        CY  HGYPLGYKPRN +  T     +  N   N N A A   P FFSSLN +QY+QL+ +LN H+ A
Subjt:  CYKIHGYPLGYKPRNPSINT----KNVQNSPINANVAVA-QQPSFFSSLNGDQYTQLLELLNTHVHA

XP_031745063.1 uncharacterized protein LOC116405242 [Cucumis sativus]9.8e-0737.14Show/hide
Query:  IDSATIEAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSG----------------SSSVETFFTKMKTLWQELNTCYKIHGYPLGYKPRN
        I S+ ++ Q+NP+ LHHS + T  LVS PL G+ NY SW RAM +ALSG                 SS   F   +K +W EL   YK    P  Y+ + 
Subjt:  IDSATIEAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSG----------------SSSVETFFTKMKTLWQELNTCYKIHGYPLGYKPRN

Query:  PSINT
          + T
Subjt:  PSINT

TrEMBL top hitse value%identityAlignment
A0A1S3CJ63 uncharacterized protein LOC1035014524.8e-0750.75Show/hide
Query:  CYKIHGYPLGYKPRNPSINT----KNVQNSPINANVAVA-QQPSFFSSLNGDQYTQLLELLNTHVHA
        CY  HGYPLGYKPRN +  T     +  N   N N A A   P FFSSLN +QY+QL+ +LN H+ A
Subjt:  CYKIHGYPLGYKPRNPSINT----KNVQNSPINANVAVA-QQPSFFSSLNGDQYTQLLELLNTHVHA

A0A5A7VE66 Cysteine-rich RLK (Receptor-like protein kinase) 82.8e-0722.7Show/hide
Query:  EAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSS-------------------------------------------------------
        +AQ+NPY +HHS   TA +V+QPLTGA NY SW RAM +A+SG +                                                       
Subjt:  EAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSS-------------------------------------------------------

Query:  -----------------------------SVETFFTKMKTLWQELN------------------------------------------------------
                                     ++ET++TK+KT+WQ LN                                                      
Subjt:  -----------------------------SVETFFTKMKTLWQELN------------------------------------------------------

Query:  ----------------------------------------------------------TCYKIHGYPLGYKPRNP-SINT---KNVQNSPINANVAVA-Q
                                                                   CYK HGYP GYKPRN  SI T    +  N+  N N A A +
Subjt:  ----------------------------------------------------------TCYKIHGYPLGYKPRNP-SINT---KNVQNSPINANVAVA-Q

Query:  QPSFFSSLNGDQYTQLLELLNTHVHA
         P FFSSLN +QY+QL+ LLN H+ A
Subjt:  QPSFFSSLNGDQYTQLLELLNTHVHA

A0A5D3DVP4 Putative mitochondrial protein4.8e-0750.75Show/hide
Query:  CYKIHGYPLGYKPRNPSINT----KNVQNSPINANVAVA-QQPSFFSSLNGDQYTQLLELLNTHVHA
        CY  HGYPLGYKPRN +  T     +  N   N N A A   P FFSSLN +QY+QL+ +LN H+ A
Subjt:  CYKIHGYPLGYKPRNPSINT----KNVQNSPINANVAVA-QQPSFFSSLNGDQYTQLLELLNTHVHA

A0A5D3E5P0 No apical meristem (NAM) protein1.3e-0927.16Show/hide
Query:  MNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSS----------------------------------------SVETFFTKMKT-------
        +NPY +HHS   TA +V QPLTGA NY+SW RAM +A+SG +                                        +    +T   T       
Subjt:  MNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSS----------------------------------------SVETFFTKMKT-------

Query:  ---------LWQE----------------------------------------------------LNTCYKIHGYPLGYKPR--NPSINTKNVQNSPINA
                 L QE                                                     + CYK HGYP GYKPR  NP  NT          
Subjt:  ---------LWQE----------------------------------------------------LNTCYKIHGYPLGYKPR--NPSINTKNVQNSPINA

Query:  NVAVAQQPSFFSSLNGDQYTQLLELLNTHVHA
        + A    P FFSSLN +QY+QL+ LLN H+ A
Subjt:  NVAVAQQPSFFSSLNGDQYTQLLELLNTHVHA

A0A803NFI1 Uncharacterized protein1.6e-0732.89Show/hide
Query:  IEAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSSSV--------------------------ETFFTKMKTLWQELNTCYKIHGYPLG
        +E   +PY LHH+ +    LVSQ LTG  NY+SW RAM +A+S  + +                            F T    L   +  CYKIHGYP G
Subjt:  IEAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSSSV--------------------------ETFFTKMKTLWQELNTCYKIHGYPLG

Query:  Y-KPRNPSINTKNVQNSPINANVAVAQQPSFFSSLNGDQYTQLLELLNT
        Y K +        +Q S   AN +     +    L   QY QLL LL T
Subjt:  Y-KPRNPSINTKNVQNSPINANVAVAQQPSFFSSLNGDQYTQLLELLNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAACCAGAAGTCTTGAGCTCTATCGATTCCGCAACAATCGAAGCACAGATGAACCCTTATTCTTTGCATCATTCCTTTAGCGCCACCGCCACCCTCGTTTCTCA
GCCGCTCACTGGAGCCGCCAACTACGTTTCATGGAAACGTGCTATGAGCATAGCTCTCTCCGGTTCTTCCTCGGTAGAAACCTTCTTCACTAAGATGAAAACTCTTTGGC
AAGAATTGAACACCTGCTATAAGATTCATGGATATCCTCTTGGTTATAAGCCTCGAAATCCCTCTATTAATACCAAGAATGTACAGAATTCTCCTATAAATGCCAATGTT
GCAGTAGCACAACAGCCAAGTTTCTTTTCTAGCCTAAATGGAGATCAATATACCCAACTTCTGGAGTTATTGAACACGCACGTCCATGCCTTAAATCGACTCGATTGGGT
TTGCTTGTATGGATTCAAGACGATCCAGAATCGGCTTTTGTATCTTTTGGGTGATTCCTTGGTATCTTGGAAGACAAAGAAACAAGCCATCAGATCTCGCTCCTCCTCGG
TGAAGCCGAATACCCTCCTCTTATTTACCTTCCTCTATTTAAGAGAGGCTCCATGGATAAATAAAACACTTGAAACTTTTCCTCTCAACCTTCTTTTCCATAATGATTTT
ATAGATTTTGGATTTTTTTTTTTGAAAATCGGGAAATCGGAGGTTCGCTCCCCTATACCCGGAATACTACTGACCCGTCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAACCAGAAGTCTTGAGCTCTATCGATTCCGCAACAATCGAAGCACAGATGAACCCTTATTCTTTGCATCATTCCTTTAGCGCCACCGCCACCCTCGTTTCTCA
GCCGCTCACTGGAGCCGCCAACTACGTTTCATGGAAACGTGCTATGAGCATAGCTCTCTCCGGTTCTTCCTCGGTAGAAACCTTCTTCACTAAGATGAAAACTCTTTGGC
AAGAATTGAACACCTGCTATAAGATTCATGGATATCCTCTTGGTTATAAGCCTCGAAATCCCTCTATTAATACCAAGAATGTACAGAATTCTCCTATAAATGCCAATGTT
GCAGTAGCACAACAGCCAAGTTTCTTTTCTAGCCTAAATGGAGATCAATATACCCAACTTCTGGAGTTATTGAACACGCACGTCCATGCCTTAAATCGACTCGATTGGGT
TTGCTTGTATGGATTCAAGACGATCCAGAATCGGCTTTTGTATCTTTTGGGTGATTCCTTGGTATCTTGGAAGACAAAGAAACAAGCCATCAGATCTCGCTCCTCCTCGG
TGAAGCCGAATACCCTCCTCTTATTTACCTTCCTCTATTTAAGAGAGGCTCCATGGATAAATAAAACACTTGAAACTTTTCCTCTCAACCTTCTTTTCCATAATGATTTT
ATAGATTTTGGATTTTTTTTTTTGAAAATCGGGAAATCGGAGGTTCGCTCCCCTATACCCGGAATACTACTGACCCGTCACTAG
Protein sequenceShow/hide protein sequence
MAEPEVLSSIDSATIEAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSSSVETFFTKMKTLWQELNTCYKIHGYPLGYKPRNPSINTKNVQNSPINANV
AVAQQPSFFSSLNGDQYTQLLELLNTHVHALNRLDWVCLYGFKTIQNRLLYLLGDSLVSWKTKKQAIRSRSSSVKPNTLLLFTFLYLREAPWINKTLETFPLNLLFHNDF
IDFGFFFLKIGKSEVRSPIPGILLTRH