; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013318 (gene) of Chayote v1 genome

Gene IDSed0013318
OrganismSechium edule (Chayote v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30
Genome locationLG07:40488007..40492964
RNA-Seq ExpressionSed0013318
SyntenySed0013318
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600058.1 Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. sororia]2.2e-12786.81Show/hide
Query:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGY--GGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFV
        MRRYSP YHSPPRRGYGG  RGRSPP RGY  GGGGGGGGGYGRRRE++HGSLLVRNIPMDCRPEELRA FERFG+VRDVYIPKD+Y+G PRGFAFVEFV
Subjt:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGY--GGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFV

Query:  DPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPS
        DPYEASEAQYHMNGKKF GREI VVLAAESRKRPEQMRQRSRR GPSGYGGRRSYYGRSRSRS+SRSRSP  PSGS SRYRSRSYSPAPRWRG+YS+SP 
Subjt:  DPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPS

Query:  RRHADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPR
        RRHADYPRSPRGAPRERDGERS QVYSPGYD+  GHDHDGNGYH+K+AF GEDARA WRS      SPGR SRSPSGSRSRSADASPR
Subjt:  RRHADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPR

KAG7030730.1 Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-12886.3Show/hide
Query:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGY---GGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEF
        MRRYSP YHSPPRRGYGG  RGRSPP RGY   GGGGGGGGGYGRRRE++HGSLLVRNIPMDCRPEELRA FERFG+VRDVYIPKD+Y+G PRGFAFVEF
Subjt:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGY---GGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEF

Query:  VDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        VDPYEASEAQYHMNGKKF GREI VVLAAESRKRPEQMRQRSRR GPSGYGGRRSYYGRSRSRS+SRSRSP  PSGS SRYRSRSYSPAPRWRG+YS+SP
Subjt:  VDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  SRRHADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
         RRHADYPRSPRGAPRERDGERS QVYSPGYD+  GHDHDGNGYH+K+AF GEDARA WRS      SPGR SRSPSGSRSRSADASPR GR
Subjt:  SRRHADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

XP_008461655.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo]3.1e-12986.51Show/hide
Query:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDP
        MRRYSP YHSPPRRGYGG  RGRSPP RGYGGGGGGGGGYGRRRE+ HGSLLVRNIPMDCRPEELRA FERFG+VRDVYIPKD+Y+G+PRGFAFVEFVDP
Subjt:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR
        YEASEAQYHMNGKKF GREI VVLAAESRKRPEQMRQRSRR GPSGYGGRRS+YGRSRSRS+SRSRSP+HPSGSRSRYRSRSYSPAPRWRGDYSVSP RR
Subjt:  YEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR

Query:  HADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
        HADYP SPRGAPRERD ERS+QVYSPGYD+ D HD +GNGYH+KS F GEDAR +WRS      SPGR SRSPSGSRSRSADASPR GR
Subjt:  HADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

XP_022139086.1 serine/arginine-rich SC35-like splicing factor SCL30 [Momordica charantia]3.3e-13991Show/hide
Query:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDP
        MRRYSP YHSPPRRGYGG  RGRSPP RGYGGGGGGGGGYGRRRE++HGSLLVRNIPMDCRPEELRA FERFG+VRDVYIPKD+YSG+PRGFAFVEFVDP
Subjt:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR
        YEASEAQYHMNGKKF GREI VVLAAESRKRPEQMRQRSRR GPSGYGGRRSYYGRSRSRS+SRSRSP HPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR
Subjt:  YEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR

Query:  HADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
        HADYPRSPRGAP ERDGERSQQ YSPGYD+ DGHDHDGNGYH+KSAF G D RA+WRSSPGRR+SPGRISRSPSGSRSRSADASPR GR
Subjt:  HADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

XP_038892248.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X2 [Benincasa hispida]1.0e-12785.96Show/hide
Query:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGY---GGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEF
        MRRYSP YHSPPRRGYGG  RGRSPP RGY   GGGGGGGGGYGRRRE+ HGSLLVRNIPMDCRPEELRA FERFG+VRDVYIPKD+Y+G+PRGFAFVEF
Subjt:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGY---GGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEF

Query:  VDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        VDPYEASEAQYHMNGKKF GREI VVLAAESRKRPEQMRQRSRR GPSGYGGRRS+YGRSRSRS+SRSRSP+HPSGSRSRYRSRSYSPAPRWRGDYSVSP
Subjt:  VDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  SRRHADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
        SRRHADYP SPRG PRERD ER++QVYSPGYD+ D H+H+GNGYH+KSAF GEDARA+WRS      SPGR SRSPSGSRSRSADASPR GR
Subjt:  SRRHADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

TrEMBL top hitse value%identityAlignment
A0A1S3CFP8 serine/arginine-rich SC35-like splicing factor SCL301.5e-12986.51Show/hide
Query:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDP
        MRRYSP YHSPPRRGYGG  RGRSPP RGYGGGGGGGGGYGRRRE+ HGSLLVRNIPMDCRPEELRA FERFG+VRDVYIPKD+Y+G+PRGFAFVEFVDP
Subjt:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR
        YEASEAQYHMNGKKF GREI VVLAAESRKRPEQMRQRSRR GPSGYGGRRS+YGRSRSRS+SRSRSP+HPSGSRSRYRSRSYSPAPRWRGDYSVSP RR
Subjt:  YEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR

Query:  HADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
        HADYP SPRGAPRERD ERS+QVYSPGYD+ D HD +GNGYH+KS F GEDAR +WRS      SPGR SRSPSGSRSRSADASPR GR
Subjt:  HADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

A0A6J1CBL6 serine/arginine-rich SC35-like splicing factor SCL301.6e-13991Show/hide
Query:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDP
        MRRYSP YHSPPRRGYGG  RGRSPP RGYGGGGGGGGGYGRRRE++HGSLLVRNIPMDCRPEELRA FERFG+VRDVYIPKD+YSG+PRGFAFVEFVDP
Subjt:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR
        YEASEAQYHMNGKKF GREI VVLAAESRKRPEQMRQRSRR GPSGYGGRRSYYGRSRSRS+SRSRSP HPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR
Subjt:  YEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR

Query:  HADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
        HADYPRSPRGAP ERDGERSQQ YSPGYD+ DGHDHDGNGYH+KSAF G D RA+WRSSPGRR+SPGRISRSPSGSRSRSADASPR GR
Subjt:  HADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

A0A6J1FWZ5 serine/arginine-rich SC35-like splicing factor SCL302.0e-12685.81Show/hide
Query:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDP
        MRRYSP YHSPPRRGYGG  RGRSPP RGY   GGGGGGYGR+RE++HGSLLVRNIPMDCRPEELRA FERFG+VRDVYIPKD+Y+G PRGFAFVEFVDP
Subjt:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR
        YEASEAQYHMNGKKF GREI VVLAAESRKRPEQMRQRSRR GPSGYGGRRSYYGRSRSRS+SRSRSP  PSGS SRYRSRSYSPAPRWRG+YS+SP RR
Subjt:  YEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR

Query:  HADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
        HADYPRSPRGAPRERDGERS QVYSPGYD+  GHDHDGNGYH+K AF GEDARA WRS      SPGR SRSPSGSRSRSADASPR GR
Subjt:  HADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

A0A6J1H0N2 serine/arginine-rich SC35-like splicing factor SCL305.0e-12585.57Show/hide
Query:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDP
        MRRYSP YHSPPRRGYGG  RGRSPP RGY  GGGGGGGYGRRRE+ HGSLLVRNIPMDCRPEELRA FERFG+VRDVYIPKD+Y+GQPRGFAFVEFVDP
Subjt:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR
        YEASEAQYHMNGKKF GREI VVLAAESRKRPEQMRQRSRR GPS YGGRRSYYGRSRSRS+SRSRSP+HPSGSRSR+RSRSYSPAPRWRGDYSVSPSRR
Subjt:  YEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR

Query:  HADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHD--GNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
        HADYPRSPRGA RERDGER++QVYSPGYD+ DG D D  GNGYH+K AF GEDARA+W      R SP R SRSPSGSRSRSADASPR GR
Subjt:  HADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHD--GNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

A0A6J1JIZ1 serine/arginine-rich SC35-like splicing factor SCL304.5e-12685.71Show/hide
Query:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGY---GGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEF
        MRRYSP YHSPPRRGYGG  RGRSPP RGY   GGGGGGGGGYGRRRE+ HGSLLVRNIPMDCRPEELRA FERFG+VRDVYIPKD+Y+GQPRGFAFVEF
Subjt:  MRRYSPLYHSPPRRGYGGPDRGRSPPRRGY---GGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEF

Query:  VDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        VDPYEASEAQYHMNGKKF GREI VVLAAESRKRPEQMRQRSRR GPS YGGRRSYYGRSRSRS+SRSRSP+HPSGSRSR+RSRSYSPAPRWRGDYSVSP
Subjt:  VDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  SRRHADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHD--GNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
        SRRHADYPRSPRGA RERDGERS+QVYSPGYD+ DG D D  GNGYH+K AF GEDARA+W      R SP R SRSPSGSRSRSADASPR GR
Subjt:  SRRHADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHD--GNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

SwissProt top hitse value%identityAlignment
Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL283.1e-2340.55Show/hide
Query:  RGYGGPDRGRSPP--RRGYGGGGGGGGGYGRRREEAHGS-LLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPYEASEAQYHM
        R Y    R RSPP  R+GY           R  E +  S LL+RN+P+D RP +LR SFERFG ++D+Y+P+++Y+G+PRGF FV++    +A+EA   M
Subjt:  RGYGGPDRGRSPP--RRGYGGGGGGGGGYGRRREEAHGS-LLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPYEASEAQYHM

Query:  NGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYG-RSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPR
        N K  GGREI +V A E+RK P++MR  +   G  G   R S+   R R RS SRSRSP       S+ R            D   SP RR     RSP 
Subjt:  NGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYG-RSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPR

Query:  GAPRERDGERSQQVYSP
          PR     +S+   SP
Subjt:  GAPRERDGERSQQVYSP

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL308.1e-7259.66Show/hide
Query:  MRRYSPLYHSPPRRGYGGPDRGRS----PPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVE
        MRRYSP Y+SPPRRGYGG  RGRS    PPRRGYGGGGGGGG    RR  +HGSLLVRNIP+DCRPEELR  FERFG VRDVYIP+D+YSGQPRGFAFVE
Subjt:  MRRYSPLYHSPPRRGYGGPDRGRS----PPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVE

Query:  FVDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVS
        FVD Y+A EAQ  MN + F GREI VV+A+ESRKRPE+MR ++R       G R   +GRSRSRS+SRSRSP+ PS SRSRYRSRSYSPAPR RG     
Subjt:  FVDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVS

Query:  PSRRHADYPRSPRGAPRERDGERSQQVYSPGYDD--TDGHDHDGNG---YHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPR
                   PRG   E D   S++ YSPGY+       D D NG     EK  +  ED R   R+          +SRSPSGSRSRS + SPR
Subjt:  PSRRHADYPRSPRGAPRERDGERSQQVYSPGYDD--TDGHDHDGNG---YHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPR

Q9BRL6 Serine/arginine-rich splicing factor 84.2e-2039.59Show/hide
Query:  SLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGP--SGY
        +L V N+     P+ LR  FE++G V DVYIP++ ++  PRGFAFV F D  +A +A+  M+G +  GRE+ V +A   R+   + RQ   RG     GY
Subjt:  SLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGP--SGY

Query:  GGR-RSYYGRSRS---RSLSRSRSPQ-HPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVY-SPGYDDTDGHDHDGNGY
        G R RSY  RSRS   R  SRSR P    S SRSRYR   YS +P  R  YS       + Y RSP    R R+       Y S GY ++    +  +  
Subjt:  GGR-RSYYGRSRS---RSLSRSRSPQ-HPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVY-SPGYDDTDGHDHDGNGY

Query:  HEKSAFGGEDARASW-RSSPGRRASPGRISRSPSGSRSRSADASP
        H KS        AS  +SS  RR+    +SRS S SRS S   SP
Subjt:  HEKSAFGGEDARASW-RSSPGRRASPGRISRSPSGSRSRSADASP

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A3.6e-2739.24Show/hide
Query:  RRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPY
        R Y+P   SPP RGYG   RGRSP  RG  GG         R  +   SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+D+Y+G PRGF F++F+DP 
Subjt:  RRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPY

Query:  EASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRH
        +A+EA++ M+G    GRE+ VV A E+RK+P +MR R R       GGR + +   R      SRSP    G RSR RSR Y+            P++RH
Subjt:  EASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRH

Query:  ADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
             SP+   R  + ERS       Y  +  H    NG   +S   G   R    S   RR+   R +RS +  ++RS    PR  R
Subjt:  ADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL331.4e-3143.75Show/hide
Query:  RRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPY
        R Y+P   SPP RGYG   RGRSP  R         G YG R  +   SLLVRN+  DCR E+LR SFE+FG V+D+Y+P+D+Y+G PRGF FV+F+DP 
Subjt:  RRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPY

Query:  EASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRH
        +A++A++HM+G    GRE+ VV A E+RK+P +MR R R GG   +  RR    R+  R  SRSRSP  P   RSR RS          GDY   P RRH
Subjt:  EASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRH

Query:  ADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
          +PRS        DG RS    SP  D + G          KS       R S   SP R  SP    R+ S S  RS   SPR  R
Subjt:  ADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 339.9e-3343.75Show/hide
Query:  RRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPY
        R Y+P   SPP RGYG   RGRSP  R         G YG R  +   SLLVRN+  DCR E+LR SFE+FG V+D+Y+P+D+Y+G PRGF FV+F+DP 
Subjt:  RRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPY

Query:  EASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRH
        +A++A++HM+G    GRE+ VV A E+RK+P +MR R R GG   +  RR    R+  R  SRSRSP  P   RSR RS          GDY   P RRH
Subjt:  EASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRH

Query:  ADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
          +PRS        DG RS    SP  D + G          KS       R S   SP R  SP    R+ S S  RS   SPR  R
Subjt:  ADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

AT1G55310.2 SC35-like splicing factor 331.4e-3447.09Show/hide
Query:  RRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPY
        R Y+P   SPP RGYG   RGRSP  R         G YG R  +   SLLVRN+  DCR E+LR SFE+FG V+D+Y+P+D+Y+G PRGF FV+F+DP 
Subjt:  RRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPY

Query:  EASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRS-YSPAPRWRGDYSVSPSRR
        +A++A++HM+G    GRE+ VV A E+RK+P +MR R R GG   +  RR    R+  R  SRSRSP  P   RSR RS   YSP PR     S+SP   
Subjt:  EASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRS-YSPAPRWRGDYSVSPSRR

Query:  HADYPRSPRGAPRERDGERSQQV
          D  RS   +P   DG R + +
Subjt:  HADYPRSPRGAPRERDGERSQQV

AT1G55310.3 SC35-like splicing factor 331.6e-3042.33Show/hide
Query:  RRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSG------------QP
        R Y+P   SPP RGYG   RGRSP  R         G YG R  +   SLLVRN+  DCR E+LR SFE+FG V+D+Y+P+D+Y+G             P
Subjt:  RRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSG------------QP

Query:  RGFAFVEFVDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRW
        RGF FV+F+DP +A++A++HM+G    GRE+ VV A E+RK+P +MR R  RGG S +  RR    R+  R  SRSRSP  P   RSR RS         
Subjt:  RGFAFVEFVDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRW

Query:  RGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
         GDY   P RRH  +PRS        DG RS    SP  D + G          KS       R S   SP R  SP    R+ S S  RS   SPR  R
Subjt:  RGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

AT3G13570.1 SC35-like splicing factor 30A2.5e-2839.24Show/hide
Query:  RRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPY
        R Y+P   SPP RGYG   RGRSP  RG  GG         R  +   SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+D+Y+G PRGF F++F+DP 
Subjt:  RRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPY

Query:  EASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRH
        +A+EA++ M+G    GRE+ VV A E+RK+P +MR R R       GGR + +   R      SRSP    G RSR RSR Y+            P++RH
Subjt:  EASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRH

Query:  ADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR
             SP+   R  + ERS       Y  +  H    NG   +S   G   R    S   RR+   R +RS +  ++RS    PR  R
Subjt:  ADYPRSPRGAPRERDGERSQQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR

AT3G55460.1 SC35-like splicing factor 305.8e-7359.66Show/hide
Query:  MRRYSPLYHSPPRRGYGGPDRGRS----PPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVE
        MRRYSP Y+SPPRRGYGG  RGRS    PPRRGYGGGGGGGG    RR  +HGSLLVRNIP+DCRPEELR  FERFG VRDVYIP+D+YSGQPRGFAFVE
Subjt:  MRRYSPLYHSPPRRGYGGPDRGRS----PPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVE

Query:  FVDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVS
        FVD Y+A EAQ  MN + F GREI VV+A+ESRKRPE+MR ++R       G R   +GRSRSRS+SRSRSP+ PS SRSRYRSRSYSPAPR RG     
Subjt:  FVDPYEASEAQYHMNGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVS

Query:  PSRRHADYPRSPRGAPRERDGERSQQVYSPGYDD--TDGHDHDGNG---YHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPR
                   PRG   E D   S++ YSPGY+       D D NG     EK  +  ED R   R+          +SRSPSGSRSRS + SPR
Subjt:  PSRRHADYPRSPRGAPRERDGERSQQVYSPGYDD--TDGHDHDGNG---YHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGATACAGTCCTCTGTACCATAGTCCGCCAAGGAGAGGATATGGTGGTCCTGATCGAGGAAGAAGCCCTCCTAGGAGGGGTTACGGTGGCGGCGGTGGTGGCGG
TGGTGGTTATGGAAGACGAAGGGAAGAAGCTCATGGTAGCCTTTTAGTTAGAAATATTCCTATGGATTGCAGGCCGGAGGAGCTTAGAGCTTCATTTGAGAGGTTTGGAA
TTGTTCGAGATGTGTATATTCCAAAGGATTTTTATTCAGGACAACCACGAGGATTTGCATTTGTGGAGTTTGTTGATCCCTATGAGGCTTCTGAAGCTCAGTATCATATG
AATGGGAAAAAATTTGGTGGTAGGGAGATTATTGTGGTCCTGGCTGCAGAGTCAAGGAAGAGGCCGGAACAGATGCGCCAACGAAGTAGAAGGGGCGGACCATCTGGCTA
TGGTGGACGTCGTTCTTATTATGGGCGTTCTAGATCTCGTTCTTTATCTCGATCACGTTCCCCCCAGCATCCTTCAGGTTCAAGAAGTAGATATCGATCGAGGTCCTACT
CCCCTGCTCCGAGATGGCGTGGTGACTATTCGGTTTCCCCTAGTAGACGACATGCTGACTATCCCAGATCTCCAAGAGGTGCTCCTCGTGAGCGAGATGGTGAGAGGAGT
CAGCAAGTATATTCTCCTGGATATGATGATACTGATGGTCACGATCACGATGGAAATGGATATCATGAGAAGTCTGCATTTGGTGGAGAGGATGCACGAGCCAGCTGGAG
GTCTTCTCCTGGTAGAAGGGCGTCTCCCGGTAGAATTTCAAGGTCCCCTTCCGGATCCCGATCCCGCTCTGCTGATGCGTCGCCAAGACCTGGTAGATAG
mRNA sequenceShow/hide mRNA sequence
ATAAAATGCTAAACCCTACGATGGAAGGCTTCTTGTTTCCAAGACTTCACAGATTCAGGTTTCTGAGTGGGGAATCTCTCTTTGCATTCTGTCATCTTCCTCATATTTTC
CTCAGGTTGAAACATGAGAAGATACAGTCCTCTGTACCATAGTCCGCCAAGGAGAGGATATGGTGGTCCTGATCGAGGAAGAAGCCCTCCTAGGAGGGGTTACGGTGGCG
GCGGTGGTGGCGGTGGTGGTTATGGAAGACGAAGGGAAGAAGCTCATGGTAGCCTTTTAGTTAGAAATATTCCTATGGATTGCAGGCCGGAGGAGCTTAGAGCTTCATTT
GAGAGGTTTGGAATTGTTCGAGATGTGTATATTCCAAAGGATTTTTATTCAGGACAACCACGAGGATTTGCATTTGTGGAGTTTGTTGATCCCTATGAGGCTTCTGAAGC
TCAGTATCATATGAATGGGAAAAAATTTGGTGGTAGGGAGATTATTGTGGTCCTGGCTGCAGAGTCAAGGAAGAGGCCGGAACAGATGCGCCAACGAAGTAGAAGGGGCG
GACCATCTGGCTATGGTGGACGTCGTTCTTATTATGGGCGTTCTAGATCTCGTTCTTTATCTCGATCACGTTCCCCCCAGCATCCTTCAGGTTCAAGAAGTAGATATCGA
TCGAGGTCCTACTCCCCTGCTCCGAGATGGCGTGGTGACTATTCGGTTTCCCCTAGTAGACGACATGCTGACTATCCCAGATCTCCAAGAGGTGCTCCTCGTGAGCGAGA
TGGTGAGAGGAGTCAGCAAGTATATTCTCCTGGATATGATGATACTGATGGTCACGATCACGATGGAAATGGATATCATGAGAAGTCTGCATTTGGTGGAGAGGATGCAC
GAGCCAGCTGGAGGTCTTCTCCTGGTAGAAGGGCGTCTCCCGGTAGAATTTCAAGGTCCCCTTCCGGATCCCGATCCCGCTCTGCTGATGCGTCGCCAAGACCTGGTAGA
TAGATTTCTTTGAGAAAACATGGTAAGTAGATGATGTGAACCTTTGTTCCTAATATTTAAGATTTGTTACTCTTAAGTTAGAAACCACTATCCAAGTAACTATTTAAGAT
TGTATTTTGTGTTTCCCTATTTTCAAGACATGGCAATTTACTTTGCTCTCATTTGAAGCTTAAATTATTACATTATGGCAGACTATCCAACTTTCTGATACTTTTCTGGA
TTGTGCATGCTTTTCTTTTTC
Protein sequenceShow/hide protein sequence
MRRYSPLYHSPPRRGYGGPDRGRSPPRRGYGGGGGGGGGYGRRREEAHGSLLVRNIPMDCRPEELRASFERFGIVRDVYIPKDFYSGQPRGFAFVEFVDPYEASEAQYHM
NGKKFGGREIIVVLAAESRKRPEQMRQRSRRGGPSGYGGRRSYYGRSRSRSLSRSRSPQHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERS
QQVYSPGYDDTDGHDHDGNGYHEKSAFGGEDARASWRSSPGRRASPGRISRSPSGSRSRSADASPRPGR