; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013325 (gene) of Chayote v1 genome

Gene IDSed0013325
OrganismSechium edule (Chayote v1)
DescriptionPMD domain-containing protein
Genome locationLG09:10779405..10781297
RNA-Seq ExpressionSed0013325
SyntenySed0013325
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046254.1 hypothetical protein E6C27_scaffold284G00570 [Cucumis melo var. makuwa]2.3e-5242.14Show/hide
Query:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS
        M +FSGEGG+I+F EYEARELI++G  I W   +  R+KHE + D  + S    SY +S+RSCYLS+R  +  II  Y+PYR GRQFGF+Q+   D+ G 
Subjt:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS

Query:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRL-----------
         P+ +LDNIL+HWRICT+  T S ++LPA SL     V+QR+  WW  KH  YFEDN   LV SV+P  S+P+LPK    N GGK+IRL           
Subjt:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRL-----------

Query:  ----------------PEEEPLAPKRGIRISALVDINTDNFFDGVPEASDFPVEPLPTEETL----NHQELQVSRIEDEI
                        P+  PL+P     +  L++ ++D +  G P A D   E + T +TL      Q L+ S   +EI
Subjt:  ----------------PEEEPLAPKRGIRISALVDINTDNFFDGVPEASDFPVEPLPTEETL----NHQELQVSRIEDEI

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]8.6e-5554.45Show/hide
Query:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS
        M +FS EGG+I+F EYEARELIH+G  I W  ++  R+KHE + D  + S   +SY +S+RSCYLS+R  +  II  Y+PYR GRQFGF+QD+P D+ G 
Subjt:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS

Query:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRLPE
         P+ +LDNIL+HWRICT+  T S ++LPARSL     V+QR+  WW  KHG YFEDN   LV S +P SS+P+LPK    N GGK+IRL E
Subjt:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRLPE

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]2.5e-5454.45Show/hide
Query:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS
        M +FSGEGG+I+F EYEARELIH+G  I W   +H RNKHE + D  + S    SY +S+RSCYLS+R  +  II  Y+PYR GRQFGF+QD+P D+ G 
Subjt:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS

Query:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRLPE
         P+ +LDNIL+HWRIC +  T S ++LP RSL     V+QR+  WW  KH NYFEDN   LV S +P  S+P+LPK    N GGK+IRL E
Subjt:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRLPE

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]1.1e-0448.15Show/hide
Query:  ETLNHQELQVSRIEDEINDIESAPILTDEDSETLDNVRKDLEAARKELKNFEWK
        E ++ QEL+V++++DE+  +ES P +T+E  ETL  VR+ +EAAR+E KNF+W+
Subjt:  ETLNHQELQVSRIEDEINDIESAPILTDEDSETLDNVRKDLEAARKELKNFEWK

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]1.1e-5253.4Show/hide
Query:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS
        M +FSGEGG+I+F EYEA ELIH+G  I W   +  R+KHE + D  + S    SY +S+RSCYLS+R  +  II  YNPYR GRQFGF+QD+P  + G 
Subjt:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS

Query:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRLPE
         P+ +L+NIL+HWRICT+  T S ++LPA SL     V+QR+  WW  KHG YFEDN   LV SV+P  S+P+LPK    N GGK+IRL E
Subjt:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRLPE

TYK18946.1 hypothetical protein E5676_scaffold418G00300 [Cucumis melo var. makuwa]2.3e-5242.14Show/hide
Query:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS
        M +FSGEGG+I+F EYEARELI++G  I W   +  R+KHE + D  + S    SY +S+RSCYLS+R  +  II  Y+PYR GRQFGF+Q+   D+ G 
Subjt:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS

Query:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRL-----------
         P+ +LDNIL+HWRICT+  T S ++LPA SL     V+QR+  WW  KH  YFEDN   LV SV+P  S+P+LPK    N GGK+IRL           
Subjt:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRL-----------

Query:  ----------------PEEEPLAPKRGIRISALVDINTDNFFDGVPEASDFPVEPLPTEETL----NHQELQVSRIEDEI
                        P+  PL+P     +  L++ ++D +  G P A D   E + T +TL      Q L+ S   +EI
Subjt:  ----------------PEEEPLAPKRGIRISALVDINTDNFFDGVPEASDFPVEPLPTEETL----NHQELQVSRIEDEI

TrEMBL top hitse value%identityAlignment
A0A5A7TT69 Uncharacterized protein1.1e-5242.14Show/hide
Query:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS
        M +FSGEGG+I+F EYEARELI++G  I W   +  R+KHE + D  + S    SY +S+RSCYLS+R  +  II  Y+PYR GRQFGF+Q+   D+ G 
Subjt:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS

Query:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRL-----------
         P+ +LDNIL+HWRICT+  T S ++LPA SL     V+QR+  WW  KH  YFEDN   LV SV+P  S+P+LPK    N GGK+IRL           
Subjt:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRL-----------

Query:  ----------------PEEEPLAPKRGIRISALVDINTDNFFDGVPEASDFPVEPLPTEETL----NHQELQVSRIEDEI
                        P+  PL+P     +  L++ ++D +  G P A D   E + T +TL      Q L+ S   +EI
Subjt:  ----------------PEEEPLAPKRGIRISALVDINTDNFFDGVPEASDFPVEPLPTEETL----NHQELQVSRIEDEI

A0A5A7TX42 Uncharacterized protein4.2e-5554.45Show/hide
Query:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS
        M +FS EGG+I+F EYEARELIH+G  I W  ++  R+KHE + D  + S   +SY +S+RSCYLS+R  +  II  Y+PYR GRQFGF+QD+P D+ G 
Subjt:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS

Query:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRLPE
         P+ +LDNIL+HWRICT+  T S ++LPARSL     V+QR+  WW  KHG YFEDN   LV S +P SS+P+LPK    N GGK+IRL E
Subjt:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRLPE

A0A5A7UGW6 PMD domain-containing protein1.2e-5454.45Show/hide
Query:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS
        M +FSGEGG+I+F EYEARELIH+G  I W   +H RNKHE + D  + S    SY +S+RSCYLS+R  +  II  Y+PYR GRQFGF+QD+P D+ G 
Subjt:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS

Query:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRLPE
         P+ +LDNIL+HWRIC +  T S ++LP RSL     V+QR+  WW  KH NYFEDN   LV S +P  S+P+LPK    N GGK+IRL E
Subjt:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRLPE

A0A5A7UGW6 PMD domain-containing protein5.2e-0548.15Show/hide
Query:  ETLNHQELQVSRIEDEINDIESAPILTDEDSETLDNVRKDLEAARKELKNFEWK
        E ++ QEL+V++++DE+  +ES P +T+E  ETL  VR+ +EAAR+E KNF+W+
Subjt:  ETLNHQELQVSRIEDEINDIESAPILTDEDSETLDNVRKDLEAARKELKNFEWK

A0A5A7UGW6 PMD domain-containing protein5.1e-5353.4Show/hide
Query:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS
        M +FSGEGG+I+F EYEA ELIH+G  I W   +  R+KHE + D  + S    SY +S+RSCYLS+R  +  II  YNPYR GRQFGF+QD+P  + G 
Subjt:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS

Query:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRLPE
         P+ +L+NIL+HWRICT+  T S ++LPA SL     V+QR+  WW  KHG YFEDN   LV SV+P  S+P+LPK    N GGK+IRL E
Subjt:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRLPE

A0A5D3D5Z3 Uncharacterized protein1.1e-5242.14Show/hide
Query:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS
        M +FSGEGG+I+F EYEARELI++G  I W   +  R+KHE + D  + S    SY +S+RSCYLS+R  +  II  Y+PYR GRQFGF+Q+   D+ G 
Subjt:  MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGS

Query:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRL-----------
         P+ +LDNIL+HWRICT+  T S ++LPA SL     V+QR+  WW  KH  YFEDN   LV SV+P  S+P+LPK    N GGK+IRL           
Subjt:  VPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRL-----------

Query:  ----------------PEEEPLAPKRGIRISALVDINTDNFFDGVPEASDFPVEPLPTEETL----NHQELQVSRIEDEI
                        P+  PL+P     +  L++ ++D +  G P A D   E + T +TL      Q L+ S   +EI
Subjt:  ----------------PEEEPLAPKRGIRISALVDINTDNFFDGVPEASDFPVEPLPTEETL----NHQELQVSRIEDEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G32120.1 FUNCTIONS IN: molecular_function unknown1.3e-0535.56Show/hide
Query:  LMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGSVPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWW
        +++   C   A+   L  IEPY P+R+  QFG+ QDVP    G VP A ++     W+   +      ++ PAR LH  D V+  Y RWW
Subjt:  LMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGSVPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWW

AT5G18510.1 Aminotransferase-like, plant mobile domain family protein5.6e-0425.89Show/hide
Query:  ITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGSVPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRY
        +T + ++    +S+   ++  YL+        +E Y PYR+ RQFG  QD+P    G V           W   + +     ++LP++    R  V+ RY
Subjt:  ITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGSVPSASLDNILHHWRICTKTRTTSRVHLPARSLHLRDQVSQRY

Query:  KRWWLAKHGNYF
        + WW      YF
Subjt:  KRWWLAKHGNYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATTTCTCCGGTGAAGGTGGTGCCATACATTTTGATGAGTACGAAGCTCGAGAATTGATTCATCATGGAGGATCTATCGCATGGGGTGTAACTATTCATGGAAG
AAATAAACATGAAGAAATAACAGATAATCAGAATATATCATCCTTCAATTCTTCATATCTCATGAGCCTTCGATCGTGCTACTTATCTGCTAGATTTGGTGATTTAATGA
TCATTGAACCCTACAACCCTTATCGAATTGGGCGACAATTCGGATTTTTTCAAGATGTCCCATATGACTTAGAAGGTAGTGTTCCATCGGCCAGTCTTGATAATATCTTA
CATCATTGGAGGATTTGCACAAAAACCAGAACAACATCTCGAGTTCATTTGCCGGCTCGATCACTACATTTACGGGATCAAGTCTCTCAACGATATAAAAGATGGTGGCT
AGCGAAGCACGGTAATTATTTCGAAGATAATGTGGTAAAATTAGTAGGAAGCGTTATGCCTACTTCATCCAAACCCAAGCTCCCCAAAGGAAACGAAGGAAATCATGGTG
GAAAGCAAATCCGTTTACCTGAAGAAGAACCCCTAGCTCCAAAACGAGGCATTCGGATTTCAGCTCTGGTTGATATCAACACTGATAATTTTTTTGACGGAGTTCCTGAG
GCATCAGACTTTCCTGTAGAGCCTTTGCCAACGGAAGAGACTTTAAACCATCAAGAACTTCAGGTTTCAAGGATTGAAGATGAGATAAATGATATAGAATCTGCTCCCAT
TTTAACTGACGAAGACTCCGAGACTTTAGATAATGTCCGTAAAGATTTGGAAGCTGCTAGAAAGGAGTTGAAGAATTTTGAGTGGAAACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATTTCTCCGGTGAAGGTGGTGCCATACATTTTGATGAGTACGAAGCTCGAGAATTGATTCATCATGGAGGATCTATCGCATGGGGTGTAACTATTCATGGAAG
AAATAAACATGAAGAAATAACAGATAATCAGAATATATCATCCTTCAATTCTTCATATCTCATGAGCCTTCGATCGTGCTACTTATCTGCTAGATTTGGTGATTTAATGA
TCATTGAACCCTACAACCCTTATCGAATTGGGCGACAATTCGGATTTTTTCAAGATGTCCCATATGACTTAGAAGGTAGTGTTCCATCGGCCAGTCTTGATAATATCTTA
CATCATTGGAGGATTTGCACAAAAACCAGAACAACATCTCGAGTTCATTTGCCGGCTCGATCACTACATTTACGGGATCAAGTCTCTCAACGATATAAAAGATGGTGGCT
AGCGAAGCACGGTAATTATTTCGAAGATAATGTGGTAAAATTAGTAGGAAGCGTTATGCCTACTTCATCCAAACCCAAGCTCCCCAAAGGAAACGAAGGAAATCATGGTG
GAAAGCAAATCCGTTTACCTGAAGAAGAACCCCTAGCTCCAAAACGAGGCATTCGGATTTCAGCTCTGGTTGATATCAACACTGATAATTTTTTTGACGGAGTTCCTGAG
GCATCAGACTTTCCTGTAGAGCCTTTGCCAACGGAAGAGACTTTAAACCATCAAGAACTTCAGGTTTCAAGGATTGAAGATGAGATAAATGATATAGAATCTGCTCCCAT
TTTAACTGACGAAGACTCCGAGACTTTAGATAATGTCCGTAAAGATTTGGAAGCTGCTAGAAAGGAGTTGAAGAATTTTGAGTGGAAACCTTGA
Protein sequenceShow/hide protein sequence
MVDFSGEGGAIHFDEYEARELIHHGGSIAWGVTIHGRNKHEEITDNQNISSFNSSYLMSLRSCYLSARFGDLMIIEPYNPYRIGRQFGFFQDVPYDLEGSVPSASLDNIL
HHWRICTKTRTTSRVHLPARSLHLRDQVSQRYKRWWLAKHGNYFEDNVVKLVGSVMPTSSKPKLPKGNEGNHGGKQIRLPEEEPLAPKRGIRISALVDINTDNFFDGVPE
ASDFPVEPLPTEETLNHQELQVSRIEDEINDIESAPILTDEDSETLDNVRKDLEAARKELKNFEWKP