CuGenDBv2

Gene ID	Sed0013329
Organism	Sechium edule (Chayote v1)
Description	Rac-like GTP-binding protein ARAC1
Genome location	LG02:9168501..9168942
RNA-Seq Expression	Sed0013329
Synteny	Sed0013329
Gene Ontology terms	GO:0007264 - small GTPase mediated signal transduction (biological process) GO:0008360 - regulation of cell shape (biological process) GO:0009073 - aromatic amino acid family biosynthetic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005886 - plasma membrane (cellular component) GO:0005938 - cell cortex (cellular component) GO:0031410 - cytoplasmic vesicle (cellular component) GO:0003856 - 3-dehydroquinate synthase activity (molecular function) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR001806 - Small GTPase IPR003578 - Small GTPase Rho IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052949.1 rac-like GTP-binding protein RHO1 [Cucumis melo var. makuwa]

5.7e-32

88.24

Show/hide

Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPISTAQGEEL KLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

TXG59824.1 hypothetical protein EZV62_014397 [Acer yangbiense]

4.3e-32

88.24

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Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD+QFFI HP AVPISTAQGEEL KLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

TYK11405.1 rac-like GTP-binding protein RHO1 [Cucumis melo var. makuwa]

5.7e-32

88.24

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Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPISTAQGEEL KLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

XP_006296623.1 rac-like GTP-binding protein ARAC1 [Capsella rubella]

9.7e-32

87.06

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Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPISTAQGEEL KLIGAPAYIECSSKTQ+NVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

XP_008448529.1 PREDICTED: rac-like GTP-binding protein ARAC1 [Cucumis melo]

5.7e-32

88.24

Show/hide

Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPISTAQGEEL KLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4X0 Uncharacterized protein

2.7e-32

88.24

Show/hide

Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPISTAQGEEL KLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

A0A1S3BKI5 rac-like GTP-binding protein ARAC1

2.7e-32

88.24

Show/hide

Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPISTAQGEEL KLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

A0A5A7UHD4 Rac-like GTP-binding protein RHO1

2.7e-32

88.24

Show/hide

Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPISTAQGEEL KLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

A0A5C7HSQ3 Uncharacterized protein

2.1e-32

88.24

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Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD+QFFI HP AVPISTAQGEEL KLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

A0A5D3CIK6 Rac-like GTP-binding protein RHO1

2.7e-32

88.24

Show/hide

Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPISTAQGEEL KLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

SwissProt top hits

e value

%identity

Alignment

P92978 Rac-like GTP-binding protein ARAC11

2.6e-32

82.35

Show/hide

Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPI+TAQGEEL K IGAP YIECSSKTQ+NVK VFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

Q35638 Rac-like GTP-binding protein RHO1

1.5e-32

82.35

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Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFF+ HP AVPI+TAQGEEL KLI APAYIECSSK+QQNVK VFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

Q38902 Rac-like GTP-binding protein ARAC1

2.8e-34

85.88

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Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPI+TAQGEEL KLIGAPAYIECSSKTQ+NVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

Q39435 Rac-like GTP-binding protein RHO1

9.1e-33

83.53

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Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPI+TAQGEEL KLIGAPAYIECSSKTQQNVK VFDAAI+VVLQPPK KKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

Q9SBJ6 Rac-like GTP-binding protein ARAC6

5.3e-33

82.35

Show/hide

Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPI+T QGEEL KLIGAPAYIECSSK+Q+NVKGVFDAAIRVVLQPPKQKKKK+KAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

Arabidopsis top hits

e value

%identity

Alignment

AT2G17800.1 Arabidopsis RAC-like 1

2.0e-35

85.88

Show/hide

Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPI+TAQGEEL KLIGAPAYIECSSKTQ+NVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

AT2G17800.2 Arabidopsis RAC-like 1

2.0e-35

85.88

Show/hide

Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPI+TAQGEEL KLIGAPAYIECSSKTQ+NVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

AT3G51290.2 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632)

1.9e-33

82.35

Show/hide

Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPI+TAQGEEL K IGAP YIECSSKTQ+NVK VFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

AT3G51300.1 RHO-related protein from plants 1

1.9e-33

82.35

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Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPI+TAQGEEL K IGAP YIECSSKTQ+NVK VFDAAIRVVLQPPKQKKKKSKAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

AT4G35950.1 RAC-like 6

3.8e-34

82.35

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Query:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL
        ++L+  +LDLRDD QFFI HP AVPI+T QGEEL KLIGAPAYIECSSK+Q+NVKGVFDAAIRVVLQPPKQKKKK+KAQKACSIL
Subjt:  LMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

Sequences

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CDS sequence

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ATGACTGCCCTGGATCCCTTTTTATTGATGTTGATTTTTTATGAGCTAGATCTTCGAGATGATAATCAGTTCTTCATTGGCCATCCAAGCGCCGTTCCTATTTCAACAGC
TCAGGGAGAGGAGCTTAGCAAGCTGATCGGTGCTCCTGCGTACATCGAGTGCAGTTCAAAAACTCAGCAGAATGTGAAGGGAGTTTTTGATGCAGCAATTAGGGTCGTAC
TTCAACCTCCAAAGCAGAAGAAAAAGAAGAGCAAAGCTCAGAAAGCATGCTCGATACTATGA

mRNA sequence

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Protein sequence

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MTALDPFLLMLIFYELDLRDDNQFFIGHPSAVPISTAQGEELSKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKSKAQKACSIL

Sed0013329 (gene) of Chayote v1 genome