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Sed0013340 (gene) of Chayote v1 genome

Gene IDSed0013340
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:34049760..34050189
RNA-Seq ExpressionSed0013340
SyntenySed0013340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035003.1 hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa]7.5e-3272.73Show/hide
Query:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
        MG NNRQKK+HSSFSIFSFFKSR+GRKGD  +      DE+  + KVWPSD D+ +HWVAEPGIDRKAKDYIDRIYRNRVFE+ERQTIT+  NG KS+V
Subjt:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
KAG6592313.1 hypothetical protein SDJN03_14659, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2867.35Show/hide
Query:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
        MG NNR KK+HSSFSIF+FFK RKGRK D YD     +E+  + KVWPSD D+ + WVAEPGIDRKAKDYID+IYRNR+FE+ERQT+TL  NG K D+
Subjt:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
KGN45869.1 hypothetical protein Csa_005516 [Cucumis sativus]1.7e-3171.72Show/hide
Query:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
        MG NNRQKKAH+SFSIFSFFKSR+GRKGD  +      DE+  + KVWPSD D+ +HWVAEPGIDRKAKDYIDRIYRNRVFE+ERQT+T+  NG KS+V
Subjt:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
KGN45870.1 hypothetical protein Csa_004960 [Cucumis sativus]4.8e-3171.58Show/hide
Query:  NRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
        NRQKK+HSSFSIFSFFKS++GRKGD YD      DE+  ++KVWPSD D+ +HW+AEPGIDRKAKDYIDRIYRNRVFE+ERQT+T+  NG KS+V
Subjt:  NRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
KGN45873.1 hypothetical protein Csa_005148 [Cucumis sativus]5.2e-3372.45Show/hide
Query:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
        MG ++RQKK HSSFSIFSFFKS++GRKGD Y+     ++V S+SKVWPSD D+GY WVAEPGIDRKAKDYIDRIY+NRVFETERQT+T+  NGP S+V
Subjt:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein2.3e-3171.58Show/hide
Query:  NRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
        NRQKK+HSSFSIFSFFKS++GRKGD YD      DE+  ++KVWPSD D+ +HW+AEPGIDRKAKDYIDRIYRNRVFE+ERQT+T+  NG KS+V
Subjt:  NRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
A0A0A0K8W0 Uncharacterized protein2.5e-3372.45Show/hide
Query:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
        MG ++RQKK HSSFSIFSFFKS++GRKGD Y+     ++V S+SKVWPSD D+GY WVAEPGIDRKAKDYIDRIY+NRVFETERQT+T+  NGP S+V
Subjt:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
A0A0A0KAK6 Uncharacterized protein8.1e-3271.72Show/hide
Query:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
        MG NNRQKKAH+SFSIFSFFKSR+GRKGD  +      DE+  + KVWPSD D+ +HWVAEPGIDRKAKDYIDRIYRNRVFE+ERQT+T+  NG KS+V
Subjt:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
A0A0A0KBW1 Uncharacterized protein8.1e-3273.68Show/hide
Query:  NRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
        NRQKK+HSSFSIFSFFKSR+GRKGD YD      DE+  ++KVWPSD D+ +HWVAEPGIDRKAKDYIDRIYRNRVFE+ERQT+T+  NG KS+V
Subjt:  NRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
A0A5A7SWT9 Uncharacterized protein3.6e-3272.73Show/hide
Query:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
        MG NNRQKK+HSSFSIFSFFKSR+GRKGD  +      DE+  + KVWPSD D+ +HWVAEPGIDRKAKDYIDRIYRNRVFE+ERQTIT+  NG KS+V
Subjt:  MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDR-----DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein9.2e-1247.13Show/hide
Query:  MGANNRQKKAHSS--FSIFSFFKSRKGRKGDCYDR-DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTIT
        MG  NR   +HSS  FS+FSFFK+R+  + +     D+   T K   SD D+ Y WVAEPGIDRKA  +I + +  RV E+ERQT++
Subjt:  MGANNRQKKAHSS--FSIFSFFKSRKGRKGDCYDR-DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTIT
AT5G26620.1 unknown protein4.3e-0956Show/hide
Query:  DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTI
        D+V  T K W SD D+ Y WVAEPGIDRKA  +I + + +RV E+ERQT+
Subjt:  DEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCCAACAACAGGCAAAAAAAGGCTCATTCTTCTTTCTCTATCTTTAGCTTCTTCAAATCGAGGAAGGGAAGGAAAGGAGATTGTTATGATCGGGACGAGGTGTC
AAGCACGAGTAAGGTGTGGCCGAGCGATGGAGATAGAGGCTACCATTGGGTTGCCGAGCCTGGTATTGATAGAAAGGCCAAAGATTACATCGACAGGATCTATAGAAACC
GTGTCTTTGAAACCGAGCGCCAAACAATCACTCTTCAACAGAATGGACCTAAATCTGATGTGTAA
mRNA sequenceShow/hide mRNA sequence
TCACACTTCAATTCATTTTCCATCTAATTACTTCTTCTCTGCCATGGGAGCCAACAACAGGCAAAAAAAGGCTCATTCTTCTTTCTCTATCTTTAGCTTCTTCAAATCGA
GGAAGGGAAGGAAAGGAGATTGTTATGATCGGGACGAGGTGTCAAGCACGAGTAAGGTGTGGCCGAGCGATGGAGATAGAGGCTACCATTGGGTTGCCGAGCCTGGTATT
GATAGAAAGGCCAAAGATTACATCGACAGGATCTATAGAAACCGTGTCTTTGAAACCGAGCGCCAAACAATCACTCTTCAACAGAATGGACCTAAATCTGATGTGTAAAT
CATTTATTTGTATATTTGATCTATTATTGTGATTTCATAGTTAGAATAAGTTGTTTCTGAGTGTTGGATCGTCAAATAATGTTACCAATCTTAACCTTTC
Protein sequenceShow/hide protein sequence
MGANNRQKKAHSSFSIFSFFKSRKGRKGDCYDRDEVSSTSKVWPSDGDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITLQQNGPKSDV