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Sed0013344 (gene) of Chayote v1 genome

Gene IDSed0013344
OrganismSechium edule (Chayote v1)
Descriptionlate embryogenesis abundant protein D-29-like
Genome locationLG07:13959941..13961010
RNA-Seq ExpressionSed0013344
SyntenySed0013344
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600582.1 hypothetical protein SDJN03_05815, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3753.69Show/hide
Query:  RTAWFIVV---LWAAEMG-VEKCRGWADE-AVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMA
        RT  F+ V   LWAAEMG VEKCRG   + A+KDVK+NI+ + ++T +  KAEA K GASEVF+DAKDAAE+W++WA  ++SKGL   EE  K TAH M 
Subjt:  RTAWFIVV---LWAAEMG-VEKCRGWADE-AVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMA

Query:  DKAGSAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKSKAKETLVSGKEKAEELYEEA-----------KECSNCEDARELVSKAADEIRATIRENT
        D AG AA KTT  I++AASDAS+ A E  +     ASD K+KAK+T V+GKEKA ++YE A           KEC NCE A+E+ S AA +I A IRE +
Subjt:  DKAGSAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKSKAKETLVSGKEKAEELYEEA-----------KECSNCEDARELVSKAADEIRATIRENT

Query:  AEL
        +EL
Subjt:  AEL
XP_004146555.1 late embryogenesis abundant protein D-29 [Cucumis sativus]2.5e-4254.63Show/hide
Query:  RRTAWFIVVLWAAEMGVEKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAG
        R+T   +V +    +  EKC G+ +EAVKDVKNN+S + +   + +KAEA K+ ASEV+++AKD  E+W++WA++K+S+GL  +EEE K TAH++ADKAG
Subjt:  RRTAWFIVVLWAAEMGVEKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAG

Query:  SAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKS---------------KAKETLVSGKEKAEELYEEAKE--CSNCEDARELVSKAADEIRATIRE
         AAIKTT+KIN+AASDASNYASEKA EA KAAS+  S               K KETLVSGK+KA E+YE AKE    NCE ARE+ SK A EI   IRE
Subjt:  SAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKS---------------KAKETLVSGKEKAEELYEEAKE--CSNCEDARELVSKAADEIRATIRE

Query:  NTAEL
         +AEL
Subjt:  NTAEL
XP_008452083.1 PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo]1.7e-4357.07Show/hide
Query:  RRTAWFIVVLWAAEMGVEKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAG
        R+TA  +V +    +  EKC G+  EAV+DVK+N+S + +  K+ +KAEA K+ ASEV+SDAKD AE+W++WA+DK+SKGL  SE+E K TAH++ADKAG
Subjt:  RRTAWFIVVLWAAEMGVEKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAG

Query:  SAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKS---------------KAKETLVSGKEKAEELYEEAKE--CSNCEDARELVSKAADEIRATIRE
         AAIKTT+KIN+AAS ASNYASEKA EA KAAS+  S               K KETLVSGK+KA E+YE AKE    NCE ARE+ SK A+EI   IRE
Subjt:  SAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKS---------------KAKETLVSGKEKAEELYEEAKE--CSNCEDARELVSKAADEIRATIRE

Query:  NTAEL
         TAEL
Subjt:  NTAEL
XP_022942848.1 late embryogenesis abundant protein D-29-like [Cucurbita moschata]4.8e-3852.91Show/hide
Query:  MRRTAWFIV----VLWAAEMG-VEKCRGWADE-AVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAH
        M  + W  V    +LWAAEMG VEKCRG   + A+KDVK+NI+ + ++T +  KAEA K GASEVF+DAKDAAE+W++WA  ++SKGL   EE  K TAH
Subjt:  MRRTAWFIV----VLWAAEMG-VEKCRGWADE-AVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAH

Query:  SMADKAGSAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKSKAKETLVSGKEKAEELYEEA-----------KECSNCEDARELVSKAADEIRATIR
         M DKAG AA KTT  I +AASDAS+ A E  +     ASD K+KAK+T V+GKEKA ++YE A           KEC NCE A+E+ S AA +I A IR
Subjt:  SMADKAGSAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKSKAKETLVSGKEKAEELYEEA-----------KECSNCEDARELVSKAADEIRATIR

Query:  ENTAEL
        E ++EL
Subjt:  ENTAEL
XP_038906279.1 late embryogenesis abundant protein D-29 isoform X2 [Benincasa hispida]5.7e-3950.23Show/hide
Query:  IVVLWAAEMGVEKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAGSAAIKT
        + V+W   +  +KCRG  +EA++DVK+N+S + + T + +KAEA K+GAS+VF DAK+ AE+W++WA+ K+SKGL ++ EE K TAH + DKAG AA KT
Subjt:  IVVLWAAEMGVEKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAGSAAIKT

Query:  TQKINSAASDASNYASEKAEEAVKA----------------------ASDMKSKAKETLVSGKEKAEELYE-----------EAKECSNCEDARELVSKA
        T+K+++AASDASNYASEKA EAVKA                      ASD+K+KAKETLV GK+KA E+YE            AKE  NC  A+E+ SK+
Subjt:  TQKINSAASDASNYASEKAEEAVKA----------------------ASDMKSKAKETLVSGKEKAEELYE-----------EAKECSNCEDARELVSKA

Query:  ADEIRATIRENTAEL
        A EI   IRE TAEL
Subjt:  ADEIRATIRENTAEL
TrEMBL top hitse value%identityAlignment
A0A0A0KUJ5 Uncharacterized protein1.2e-4254.63Show/hide
Query:  RRTAWFIVVLWAAEMGVEKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAG
        R+T   +V +    +  EKC G+ +EAVKDVKNN+S + +   + +KAEA K+ ASEV+++AKD  E+W++WA++K+S+GL  +EEE K TAH++ADKAG
Subjt:  RRTAWFIVVLWAAEMGVEKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAG

Query:  SAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKS---------------KAKETLVSGKEKAEELYEEAKE--CSNCEDARELVSKAADEIRATIRE
         AAIKTT+KIN+AASDASNYASEKA EA KAAS+  S               K KETLVSGK+KA E+YE AKE    NCE ARE+ SK A EI   IRE
Subjt:  SAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKS---------------KAKETLVSGKEKAEELYEEAKE--CSNCEDARELVSKAADEIRATIRE

Query:  NTAEL
         +AEL
Subjt:  NTAEL
A0A1S3BT31 late embryogenesis abundant protein D-29-like8.3e-4457.07Show/hide
Query:  RRTAWFIVVLWAAEMGVEKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAG
        R+TA  +V +    +  EKC G+  EAV+DVK+N+S + +  K+ +KAEA K+ ASEV+SDAKD AE+W++WA+DK+SKGL  SE+E K TAH++ADKAG
Subjt:  RRTAWFIVVLWAAEMGVEKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAG

Query:  SAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKS---------------KAKETLVSGKEKAEELYEEAKE--CSNCEDARELVSKAADEIRATIRE
         AAIKTT+KIN+AAS ASNYASEKA EA KAAS+  S               K KETLVSGK+KA E+YE AKE    NCE ARE+ SK A+EI   IRE
Subjt:  SAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKS---------------KAKETLVSGKEKAEELYEEAKE--CSNCEDARELVSKAADEIRATIRE

Query:  NTAEL
         TAEL
Subjt:  NTAEL
A0A5A7TSE6 Late embryogenesis abundant protein D-29-like8.3e-4457.07Show/hide
Query:  RRTAWFIVVLWAAEMGVEKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAG
        R+TA  +V +    +  EKC G+  EAV+DVK+N+S + +  K+ +KAEA K+ ASEV+SDAKD AE+W++WA+DK+SKGL  SE+E K TAH++ADKAG
Subjt:  RRTAWFIVVLWAAEMGVEKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAG

Query:  SAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKS---------------KAKETLVSGKEKAEELYEEAKE--CSNCEDARELVSKAADEIRATIRE
         AAIKTT+KIN+AAS ASNYASEKA EA KAAS+  S               K KETLVSGK+KA E+YE AKE    NCE ARE+ SK A+EI   IRE
Subjt:  SAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKS---------------KAKETLVSGKEKAEELYEEAKE--CSNCEDARELVSKAADEIRATIRE

Query:  NTAEL
         TAEL
Subjt:  NTAEL
A0A6J1FVT6 late embryogenesis abundant protein D-29-like2.3e-3852.91Show/hide
Query:  MRRTAWFIV----VLWAAEMG-VEKCRGWADE-AVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAH
        M  + W  V    +LWAAEMG VEKCRG   + A+KDVK+NI+ + ++T +  KAEA K GASEVF+DAKDAAE+W++WA  ++SKGL   EE  K TAH
Subjt:  MRRTAWFIV----VLWAAEMG-VEKCRGWADE-AVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAH

Query:  SMADKAGSAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKSKAKETLVSGKEKAEELYEEA-----------KECSNCEDARELVSKAADEIRATIR
         M DKAG AA KTT  I +AASDAS+ A E  +     ASD K+KAK+T V+GKEKA ++YE A           KEC NCE A+E+ S AA +I A IR
Subjt:  SMADKAGSAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKSKAKETLVSGKEKAEELYEEA-----------KECSNCEDARELVSKAADEIRATIR

Query:  ENTAEL
        E ++EL
Subjt:  ENTAEL
A0A6J1J6J8 late embryogenesis abundant protein D-29-like3.7e-2845.63Show/hide
Query:  MRRTAWFIV----VLWAAEMG-VEKCRGWADE-AVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAH
        M  + W  V    +LWA EMG VEKCRG   + AVKDVK+NI+ + ++  +  KAEA K GASEVF+DAKDAAE+W++WA  ++SKGL   EE  K TAH
Subjt:  MRRTAWFIV----VLWAAEMG-VEKCRGWADE-AVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAH

Query:  SMADKAGSAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKSKAKETLVSGKEKAEELYEEA-----------KECSNCEDARELVSKAADEIRATIR
         M DKAG                                 D K+KAKETLV+GKEKA ++YE A           KEC NCE A+E+ S AA +I A IR
Subjt:  SMADKAGSAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKSKAKETLVSGKEKAEELYEEA-----------KECSNCEDARELVSKAADEIRATIR

Query:  ENTAEL
        E ++EL
Subjt:  ENTAEL
SwissProt top hitse value%identityAlignment
P13940 Late embryogenesis abundant protein D-297.1e-0833.14Show/hide
Query:  EKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRY-SEEEWKGTAHSMADKAGSAAIKTTQKINSAASD
        ++ +  AD A  +VK+N              + AK  ASEV  +AK+  E+W +WA +K+S+GL +  +++ KG+     D     A KT  K+   AS 
Subjt:  EKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRY-SEEEWKGTAHSMADKAGSAAIKTTQKINSAASD

Query:  ASNYASEKAEE----AVKAASDMKSKAK----ETLVSGKEKAEELYEEAKECSNCE--DARELVSKAAD
        A  Y++ KA++    A K   D+K+ AK    E   +  EKA EL + AKE +N     A+E V   AD
Subjt:  ASNYASEKAEE----AVKAASDMKSKAK----ETLVSGKEKAEELYEEAKECSNCE--DARELVSKAAD
Arabidopsis top hitse value%identityAlignment
AT3G17520.1 Late embryogenesis abundant protein (LEA) family protein9.8e-0529.82Show/hide
Query:  EKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAGSAAIKTTQKINSAASDA
        E   GWA E +     +I+  N    V +KA+ AK  A     DAK+      + A +K                   A    SAA +  +K+   A   
Subjt:  EKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAGSAAIKTTQKINSAASDA

Query:  SNYASEKAEEAVKAASDMKSKAKETLVSGKEKAEELYEEAKECSNCEDARELVSKAADEIRATIRENTAEL
        S  A EK +E+ + A   KSKA ETL S K+KA + Y+ A   S  E+A++ VS  +  ++ ++ ++ AEL
Subjt:  SNYASEKAEEAVKAASDMKSKAKETLVSGKEKAEELYEEAKECSNCEDARELVSKAADEIRATIRENTAEL
AT4G21020.1 Late embryogenesis abundant protein (LEA) family protein8.3e-0433.82Show/hide
Query:  AEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAGSAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKSKAKETLVSGK
        A+AAK  A+E  S A D A    + A DK  +    ++E+ K TA++  +KA   A +T  K+N  A  A++ A +  E+A   A D    AKE     K
Subjt:  AEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAGSAAIKTTQKINSAASDASNYASEKAEEAVKAASDMKSKAKETLVSGK

Query:  EKAEELYEEAKECSNCEDARELVSKAADEIRATIRE
        EK +E  E+ KE    E  +E V   A+E+    +E
Subjt:  EKAEELYEEAKECSNCEDARELVSKAADEIRATIRE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGAACGGCGTGGTTTATAGTGGTGTTATGGGCGGCCGAGATGGGGGTGGAGAAATGCCGGGGATGGGCGGATGAAGCGGTGAAGGATGTGAAGAACAATATCAG
TAGAGTTAATCAAATTACAAAGGTTGGTGATAAAGCGGAGGCAGCTAAGACCGGCGCTTCGGAGGTGTTTAGTGACGCCAAGGACGCCGCTGAGGCGTGGGCCGACTGGG
CTCACGACAAGGTTTCCAAAGGATTGAGATATAGCGAGGAAGAATGGAAAGGGACGGCCCACTCCATGGCGGATAAAGCCGGTAGTGCCGCCATAAAAACAACACAAAAG
ATCAACTCAGCAGCCTCAGATGCATCGAATTACGCATCTGAGAAAGCGGAGGAGGCCGTGAAGGCGGCCTCGGACATGAAATCGAAGGCGAAAGAGACGCTGGTAAGTGG
GAAAGAGAAGGCGGAAGAGTTATACGAGGAGGCGAAGGAATGCAGTAACTGTGAAGATGCTAGAGAATTGGTGTCCAAGGCCGCCGATGAAATTAGGGCCACTATACGGG
AAAACACTGCCGAGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGAACGGCGTGGTTTATAGTGGTGTTATGGGCGGCCGAGATGGGGGTGGAGAAATGCCGGGGATGGGCGGATGAAGCGGTGAAGGATGTGAAGAACAATATCAG
TAGAGTTAATCAAATTACAAAGGTTGGTGATAAAGCGGAGGCAGCTAAGACCGGCGCTTCGGAGGTGTTTAGTGACGCCAAGGACGCCGCTGAGGCGTGGGCCGACTGGG
CTCACGACAAGGTTTCCAAAGGATTGAGATATAGCGAGGAAGAATGGAAAGGGACGGCCCACTCCATGGCGGATAAAGCCGGTAGTGCCGCCATAAAAACAACACAAAAG
ATCAACTCAGCAGCCTCAGATGCATCGAATTACGCATCTGAGAAAGCGGAGGAGGCCGTGAAGGCGGCCTCGGACATGAAATCGAAGGCGAAAGAGACGCTGGTAAGTGG
GAAAGAGAAGGCGGAAGAGTTATACGAGGAGGCGAAGGAATGCAGTAACTGTGAAGATGCTAGAGAATTGGTGTCCAAGGCCGCCGATGAAATTAGGGCCACTATACGGG
AAAACACTGCCGAGCTGTGA
Protein sequenceShow/hide protein sequence
MRRTAWFIVVLWAAEMGVEKCRGWADEAVKDVKNNISRVNQITKVGDKAEAAKTGASEVFSDAKDAAEAWADWAHDKVSKGLRYSEEEWKGTAHSMADKAGSAAIKTTQK
INSAASDASNYASEKAEEAVKAASDMKSKAKETLVSGKEKAEELYEEAKECSNCEDARELVSKAADEIRATIRENTAEL