CuGenDBv2

Gene ID	Sed0013386
Organism	Sechium edule (Chayote v1)
Description	cilia- and flagella-associated protein 20
Genome location	LG04:39160707..39162378
RNA-Seq Expression	Sed0013386
Synteny	Sed0013386
Gene Ontology terms	NA
InterPro domains	IPR007714 - CFA20 domain IPR040441 - Cilia- and flagella-associated protein 20/CFAP20DC

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022139282.1 cilia- and flagella-associated protein 20 isoform X1 [Momordica charantia]

7.9e-65

90.07

Show/hide

Query:  PLHPW----LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYIC
        PL  W    +S+GHIKRPQDEDIQSN LEIVGS IQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYIC
Subjt:  PLHPW----LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYIC

Query:  TMPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        TMPL+MDE WNHIQ NLAD TRRAYGTNYVETLRVQVHANC
Subjt:  TMPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

XP_022139283.1 cilia- and flagella-associated protein 20 isoform X2 [Momordica charantia]

6.1e-65

90.71

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   +S+GHIKRPQDEDIQSN LEIVGS IQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MPL+MDE WNHIQ NLAD TRRAYGTNYVETLRVQVHANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

XP_022944834.1 cilia- and flagella-associated protein 20 [Cucurbita moschata]

6.1e-65

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   +S+GHIKRPQDEDIQSN +EIVGS +QSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MPL+MDE WNHIQ NLADLTRRAYGTNYVETLRVQVHANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

XP_022966967.1 cilia- and flagella-associated protein 20 [Cucurbita maxima]

2.1e-65

90.71

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   +S+GHIKRPQDEDIQSNA+EIVGS +QSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MPL+MDE WNHIQ NLADLTRRAYGTNYVETLRVQVHANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

XP_038892068.1 cilia- and flagella-associated protein 20 isoform X1 [Benincasa hispida]

1.8e-64

89.29

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   +S+GHIKRPQDEDIQSN LEIVGS +QSTYITCPADPA+TLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MPL+MDE WNHIQ NLAD TRRAYGTNYVETLRVQVHANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

TrEMBL top hits

e value

%identity

Alignment

A0A2N9GIS3 DUF667 domain-containing protein

3.3e-64

87.86

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   +++GHIKRPQDEDIQSN LEIVGSNIQSTYITCPADPAATLGIKLPFLV+IVKNLKKYFTFEIQ+LDDKNVRRRFRASNFQA+TRVKPYICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MPL+MDE WN IQ NLAD TRRAYGTNYVETLRVQVHANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

A0A6J1CDI8 cilia- and flagella-associated protein 20 isoform X1

3.8e-65

90.07

Show/hide

Query:  PLHPW----LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYIC
        PL  W    +S+GHIKRPQDEDIQSN LEIVGS IQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYIC
Subjt:  PLHPW----LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYIC

Query:  TMPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        TMPL+MDE WNHIQ NLAD TRRAYGTNYVETLRVQVHANC
Subjt:  TMPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

A0A6J1CFC1 cilia- and flagella-associated protein 20 isoform X2

2.9e-65

90.71

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   +S+GHIKRPQDEDIQSN LEIVGS IQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MPL+MDE WNHIQ NLAD TRRAYGTNYVETLRVQVHANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

A0A6J1FZ95 cilia- and flagella-associated protein 20

2.9e-65

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   +S+GHIKRPQDEDIQSN +EIVGS +QSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MPL+MDE WNHIQ NLADLTRRAYGTNYVETLRVQVHANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

A0A6J1HPF3 cilia- and flagella-associated protein 20

1.0e-65

90.71

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   +S+GHIKRPQDEDIQSNA+EIVGS +QSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MPL+MDE WNHIQ NLADLTRRAYGTNYVETLRVQVHANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

SwissProt top hits

e value

%identity

Alignment

A8IU92 Cilia- and flagella-associated protein 20

2.4e-56

72.86

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   +S+GHIKR  D DIQS+ LEI+G N+ +TYITCPADP  TLGIKLPFLV+I+KNL KYF+FE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MP+++D  WN IQ NL+D TRRAYGTNY+ETLRVQVHANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

Q5ZHP3 Cilia- and flagella-associated protein 20

2.4e-56

72.86

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   + +GHIKR  D DIQS  LEI G+N+ +TYITCPADP  TLGIKLPFLV+I+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MP+++D+ WN IQ NL+D TRRAYGTNY+ETLRVQ+HANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

Q6B857 Cilia- and flagella-associated protein 20

2.4e-56

72.86

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   + +GHIKR  D DIQS  LEI G+N+ +TYITCPADP  TLGIKLPFLV+I+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MP+++D+ WN IQ NL+D TRRAYGTNY+ETLRVQ+HANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

Q8BTU1 Cilia- and flagella-associated protein 20

2.4e-56

72.86

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   + +GHIKR  D DIQS  LEI G+N+ +TYITCPADP  TLGIKLPFLV+I+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MP+++D+ WN IQ NL+D TRRAYGTNY+ETLRVQ+HANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

Q9VKV8 Cilia- and flagella-associated protein 20

8.3e-57

73.57

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   + +GHIKR  D DIQS  LEIVG+N+ +T+ITCPADP  TLGIKLPFLV+I+KN+KKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MP+++DE WN IQ NL+D TRRAYGTNYVETLRVQ+HANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

Arabidopsis top hits

e value

%identity

Alignment

AT3G12300.1 unknown protein

3.6e-63

80.71

Show/hide

Query:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
        PL  W   + DGH+KR  D+DIQSN LE+VGSNIQSTYITCPAD +ATLGIKLPFLV++VK++KKYF+FEIQ+LDDKNVRRRFRASNFQA+TRVKPYICT
Subjt:  PLHPW---LSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT

Query:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC
        MPLKMDE WN IQ NLADLTRRAYGTNY ETLRVQ+HANC
Subjt:  MPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATAAAAATTAATTTCCAATCAATTCAGCATTTTGCATTGATTTTATTTCTTTTATTTAACCCTCACCAGAATTCTGTTTTACTGTGTTTTCCCCTTCATCCATGGCT
TTCTGATGGCCACATCAAACGGCCTCAAGATGAAGACATCCAATCAAATGCTCTTGAAATTGTTGGATCCAATATTCAGTCTACCTATATAACATGCCCAGCAGACCCAG
CTGCTACACTGGGTATAAAATTGCCATTCTTGGTTATAATTGTGAAGAATCTCAAGAAATATTTTACTTTCGAGATTCAAGTTCTCGACGATAAGAATGTCAGAAGACGC
TTCCGAGCTTCTAACTTTCAAGCTATCACTAGAGTTAAGCCATATATCTGCACCATGCCTCTAAAAATGGATGAATGCTGGAACCATATCCAGCAAAATCTGGCTGACTT
AACTCGGAGGGCGTATGGCACAAACTACGTCGAGACATTGCGAGTTCAGGTACATGCAAACTGCCTGCCGCTTGAGGAGGATTTATTTTGCAGATCGCTTGTATTCGGAG
GAAGAGCTTCCGCCAGAGTTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MIKINFQSIQHFALILFLLFNPHQNSVLLCFPLHPWLSDGHIKRPQDEDIQSNALEIVGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRR
FRASNFQAITRVKPYICTMPLKMDECWNHIQQNLADLTRRAYGTNYVETLRVQVHANCLPLEEDLFCRSLVFGGRASARV

Sed0013386 (gene) of Chayote v1 genome