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Sed0013399 (gene) of Chayote v1 genome

Gene IDSed0013399
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG05:31755472..31756243
RNA-Seq ExpressionSed0013399
SyntenySed0013399
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037665.1 hypothetical protein SDJN02_01295, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-1480.39Show/hide
Query:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
        MANQ+  DS PWILDL+PFIVV+LIAAHVLAL YWIYRL+TDNR QR KAH
Subjt:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
XP_008453078.1 PREDICTED: uncharacterized protein LOC103493902 [Cucumis melo]5.9e-1580.39Show/hide
Query:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
        MANQ++ DS PWILD++PFIVV+LI AHVLALVYWIYRL TDNRPQR KAH
Subjt:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
XP_022935881.1 uncharacterized protein LOC111442654 [Cucurbita moschata]1.2e-1582.35Show/hide
Query:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
        MANQ+  DS PWILD++PFIVV+LIAAHVLALVYWIYRL+TDNRPQR KAH
Subjt:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
XP_022977153.1 uncharacterized protein LOC111477303 [Cucurbita maxima]1.0e-1478.43Show/hide
Query:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
        MANQ+  DS PWILD++PFIV +LIAAHVLALVYWIYRL+T+NRPQR KAH
Subjt:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
XP_023535177.1 uncharacterized protein LOC111796681 [Cucurbita pepo subsp. pepo]2.0e-1582.35Show/hide
Query:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
        MANQ+  DS PWILD +PFIVV+LIAAHVLALVYWIYRL+TDNRPQR KAH
Subjt:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
TrEMBL top hitse value%identityAlignment
A0A0A0L5I3 Uncharacterized protein1.4e-1478.43Show/hide
Query:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
        MAN+ + DS PWILD++PFIVV+LI AHVLALVYWIYRL TDNRPQR KAH
Subjt:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
A0A1S3BWH4 uncharacterized protein LOC1034939022.8e-1580.39Show/hide
Query:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
        MANQ++ DS PWILD++PFIVV+LI AHVLALVYWIYRL TDNRPQR KAH
Subjt:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
A0A2G3BQQ1 Uncharacterized protein1.7e-1270.59Show/hide
Query:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
        M NQ+H  S PWIL+ LP +VV+LIAAHVLALVYWIYRL+T+ +PQRSK H
Subjt:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
A0A6J1F6U7 uncharacterized protein LOC1114426545.7e-1682.35Show/hide
Query:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
        MANQ+  DS PWILD++PFIVV+LIAAHVLALVYWIYRL+TDNRPQR KAH
Subjt:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
A0A6J1IQM9 uncharacterized protein LOC1114773034.9e-1578.43Show/hide
Query:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
        MANQ+  DS PWILD++PFIV +LIAAHVLALVYWIYRL+T+NRPQR KAH
Subjt:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G10745.1 unknown protein2.7e-1060.38Show/hide
Query:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNR--PQRSKAH
        MA ++H    PW LDL+P +VVLL AAHV+AL YWIYRL+TD R   QR K H
Subjt:  MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNR--PQRSKAH
AT5G24980.1 unknown protein4.8e-0763.89Show/hide
Query:  LDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSK
        +DL+P +VV L A HV+ALVYWIYRL++D  PQR K
Subjt:  LDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACCAGAAACATGCTGATTCAACGCCGTGGATTCTCGATCTCCTTCCTTTCATCGTTGTTCTTCTAATTGCCGCTCATGTTCTCGCTCTGGTCTACTGGATTTA
CAGATTGTCGACGGATAACAGGCCTCAAAGGAGCAAAGCACATTGA
mRNA sequenceShow/hide mRNA sequence
AGCGCCCAGAAAGATTTGGATCCGAGAGGAAGGTCCAGAATTTGAACGGAGCTTATTCGACGGTGGATTCTCCCATATACATGTGGTTTTTTCTCCATTAACGACGATCC
CATTACCTTACATCTTCTTGGTTCATTAATTTGTCACTCAGCTACCATATCAATAAAGTGAATATGAAACTTTCGTTTTCAAACCAGGGGATATCATAGATCTGAATCTG
CAATGGCGAACCAGAAACATGCTGATTCAACGCCGTGGATTCTCGATCTCCTTCCTTTCATCGTTGTTCTTCTAATTGCCGCTCATGTTCTCGCTCTGGTCTACTGGATT
TACAGATTGTCGACGGATAACAGGCCTCAAAGGAGCAAAGCACATTGAATAGCAGTTTCATTTACTCAGCATTTGAGAAGGTTAGTGCAGCCCTGAATGTTTTCGAAGCT
CATTGCTGCAAGCTACTGGTAATTACTGTACCTAATACTTGAAAATCATATGTAACAGATCCTGGATTGAATTAGGTTGGTGTAAGGGTTCTGACTTTGATCTAGTTGAT
CGGTTTCGTTATAGCTGTTTCTCCAACTCTGTGACATGTTTTCTAGGGATATGAAACTGTTTCTTCATTATTCAGTGACAGTAAATTATCAGTGAACTACATTTATAGGA
GCAATATAGAAACTAATAATTCTTTTCCTTGATATCG
Protein sequenceShow/hide protein sequence
MANQKHADSTPWILDLLPFIVVLLIAAHVLALVYWIYRLSTDNRPQRSKAH