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Sed0013410 (gene) of Chayote v1 genome

Gene IDSed0013410
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG04:42955462..42955875
RNA-Seq ExpressionSed0013410
SyntenySed0013410
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144609.1 uncharacterized protein LOC101208968 [Cucumis sativus]1.2e-4369.63Show/hide
Query:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK
        MSV+LLDG TI+NFV+DEEAF+   RE F  LDTD DG LSY EMLKE+ +LRV E DFG DVKPD +EL+ LY  VF  FDRDS+G+VD DEFM G K 
Subjt:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK

Query:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKA
        MMLAIA+G+G LPIQMALE+D FLMKAV REA KA
Subjt:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKA

XP_022135904.1 uncharacterized protein LOC111007741 [Momordica charantia]5.6e-4467.91Show/hide
Query:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK
        MSV++LD  TI+NFV+DEEAF A +RERF+ LD D DGVLSY EML+E+ SLRV ET FGVD KPDP+EL+ LYG VF  FDR+SNGEVD +EFM+GTK+
Subjt:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK

Query:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAK
        +M+AIA+G+G LP+QMALEED FLMKAV  E ++
Subjt:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAK

XP_022136066.1 uncharacterized protein LOC111007849 [Momordica charantia]2.1e-4366.42Show/hide
Query:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK
        MSV+LLDG TI++FV+DEE F A+V+ERF  LD+D DGVLSY EML+E+QSLRV ET FG+DVKPDP+E++++YG +F LFDRD NG+VD  EFM+ TKK
Subjt:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK

Query:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKAVA
        MMLA+A+G+G+LPIQM LEE+ FL KAV RE  K  A
Subjt:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKAVA

XP_023529818.1 uncharacterized protein LOC111792532 [Cucurbita pepo subsp. pepo]2.8e-4366.42Show/hide
Query:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK
        MSV++LDG TI+NFV+D+E F A VRERF  LD DGDGVLSY+EML+E+QSLRV ET FG+DVKPDP+EL+S+YG +F  FDRD NG+VD  EFM  TKK
Subjt:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK

Query:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKAVA
        MM+A+A+G+G+LP+QM LEE+S L KAV RE+ K  A
Subjt:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKAVA

XP_038887184.1 uncharacterized protein LOC120077371 [Benincasa hispida]9.2e-4772.59Show/hide
Query:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK
        MSV+LLDG TI+NFV+DEEAF+   RE F  LDTDGDG LSY EMLKE+ SLRV E DFG DVKPD ++L+ LYG VFG FDRDSNG+VD DEFM G K 
Subjt:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK

Query:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKA
        MMLAIA+G+G LPIQMALE+D FLMKAV REA KA
Subjt:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKA

TrEMBL top hitse value%identityAlignment
A0A1S3C0M6 uncharacterized protein LOC1034956563.9e-4369.63Show/hide
Query:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK
        MSV+LLDG TI+NFV+DEEAF+   RE F  LDTD DG LSY EMLKE  +LRV E DFG DVK D +EL+ LYG VF  FDRDS+G+VD DEFM G K 
Subjt:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK

Query:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKA
        MMLAIA+G+G LPIQMALE+D FLMKAV REA KA
Subjt:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKA

A0A2P5C4Z9 Parvalbumin3.9e-4364.96Show/hide
Query:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK
        MSV++LD TTI+NFV+D+EAFH S+ +RF  LDT+ DG+LSY EMLKE++SLRV ET FG+DVKP+P+ELA +YG +F LFD DS+G VD +EF S TK+
Subjt:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK

Query:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKAVA
        MMLA+A+G+G LP+QM LEEDSFL KAV RE++K  A
Subjt:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKAVA

A0A5A7UY59 Uncharacterized protein3.9e-4369.63Show/hide
Query:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK
        MSV+LLDG TI+NFV+DEEAF+   RE F  LDTD DG LSY EMLKE  +LRV E DFG DVK D +EL+ LYG VF  FDRDS+G+VD DEFM G K 
Subjt:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK

Query:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKA
        MMLAIA+G+G LPIQMALE+D FLMKAV REA KA
Subjt:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKA

A0A6J1C2G7 uncharacterized protein LOC1110078491.0e-4366.42Show/hide
Query:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK
        MSV+LLDG TI++FV+DEE F A+V+ERF  LD+D DGVLSY EML+E+QSLRV ET FG+DVKPDP+E++++YG +F LFDRD NG+VD  EFM+ TKK
Subjt:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK

Query:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKAVA
        MMLA+A+G+G+LPIQM LEE+ FL KAV RE  K  A
Subjt:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAKAVA

A0A6J1C2T1 uncharacterized protein LOC1110077412.7e-4467.91Show/hide
Query:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK
        MSV++LD  TI+NFV+DEEAF A +RERF+ LD D DGVLSY EML+E+ SLRV ET FGVD KPDP+EL+ LYG VF  FDR+SNGEVD +EFM+GTK+
Subjt:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK

Query:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAK
        +M+AIA+G+G LP+QMALEED FLMKAV  E ++
Subjt:  MMLAIADGVGVLPIQMALEEDSFLMKAVLREAAK

SwissProt top hitse value%identityAlignment
Q06BI3 Calcium-binding protein 82.0e-0438.89Show/hide
Query:  VRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMS
        +RE F+ LD DG+G +S +E+   M+SL            P   ELA    I+    D D +G+VDFDEFM+
Subjt:  VRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMS

Q9BXU9 Calcium-binding protein 82.0e-0438.89Show/hide
Query:  VRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMS
        +RE F+ LD DG+G +S +E+   M+SL            P   ELA    I+    D D +G+VDFDEFM+
Subjt:  VRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMS

Q9JJG7 Calcium-binding protein 82.0e-0438.89Show/hide
Query:  VRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMS
        +RE F+ LD DG+G +S +E+   M+SL            P   ELA    I+    D D +G+VDFDEFM+
Subjt:  VRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMS

Q9SZ45 Calcium uptake protein, mitochondrial2.0e-0432.18Show/hide
Query:  SVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKKMMLAIADGVG
        S  E F   D D DG++S+KE +  +  L + E+ F V                F +FD D+NGE+D +EF +    M      GVG
Subjt:  SVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKKMMLAIADGVG

Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein3.1e-0826.56Show/hide
Query:  LLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKKMMLA
        ++   T++ F+ D ++F +   + F+ LD D +G+LS  E+ + + ++   E+    +V P  +E  ++Y  +F  F  D   +     F     +++ A
Subjt:  LLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKKMMLA

Query:  IADGVGVLPIQMALEEDSFLMKAVLREA
        +A G+G  P+ M +  D  +MKAVL E+
Subjt:  IADGVGVLPIQMALEEDSFLMKAVLREA

AT2G44310.1 Calcium-binding EF-hand family protein1.7e-3050.74Show/hide
Query:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK
        M V L+DG+T+ +FV DEE F  SV ERF  LD + DGVLS  E+ K  +S+R+ E+ FGVDV    +EL +LY  +F  FD D +G VD +EF S  KK
Subjt:  MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKK

Query:  MMLAIADGVGVLPIQMAL--EEDSFLMKAVLREAAK
        ++LAIADG+G  PI M L  ++D+FL KA   EA+K
Subjt:  MMLAIADGVGVLPIQMAL--EEDSFLMKAVLREAAK

AT4G32060.1 calcium-binding EF hand family protein1.4e-0532.18Show/hide
Query:  SVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKKMMLAIADGVG
        S  E F   D D DG++S+KE +  +  L + E+ F V                F +FD D+NGE+D +EF +    M      GVG
Subjt:  SVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKKMMLAIADGVG

AT4G32060.2 calcium-binding EF hand family protein1.4e-0532.18Show/hide
Query:  SVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKKMMLAIADGVG
        S  E F   D D DG++S+KE +  +  L + E+ F V                F +FD D+NGE+D +EF +    M      GVG
Subjt:  SVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKKMMLAIADGVG

AT4G38810.2 Calcium-binding EF-hand family protein3.8e-0627.93Show/hide
Query:  QLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKKMML
        Q+LDG+ I+  V++E+ F   V ++F+ LD D DG LS  E+   +  +       G+  +    +   +Y  V   F   S  +V   EF      ++L
Subjt:  QLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKKMML

Query:  AIADGVGVLPI
         +A G+   PI
Subjt:  AIADGVGVLPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTACAATTGCTCGACGGCACCACCATTCTCAACTTTGTGCAAGACGAAGAAGCCTTCCACGCTTCGGTACGAGAGCGTTTCAAATGCCTCGACACCGATGGCGA
TGGTGTCCTCTCCTACAAGGAGATGTTGAAGGAAATGCAGAGTCTCAGGGTTCGGGAAACCGACTTCGGAGTCGATGTGAAACCTGACCCAGAAGAGCTAGCGAGTCTCT
ACGGCATTGTGTTTGGACTGTTCGATCGAGACTCGAATGGAGAAGTTGATTTTGATGAGTTCATGAGTGGAACCAAGAAGATGATGCTTGCCATTGCTGACGGAGTCGGG
GTTTTGCCGATCCAAATGGCGTTGGAAGAGGATAGTTTCTTGATGAAAGCCGTTCTTAGAGAAGCCGCCAAAGCAGTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTACAATTGCTCGACGGCACCACCATTCTCAACTTTGTGCAAGACGAAGAAGCCTTCCACGCTTCGGTACGAGAGCGTTTCAAATGCCTCGACACCGATGGCGA
TGGTGTCCTCTCCTACAAGGAGATGTTGAAGGAAATGCAGAGTCTCAGGGTTCGGGAAACCGACTTCGGAGTCGATGTGAAACCTGACCCAGAAGAGCTAGCGAGTCTCT
ACGGCATTGTGTTTGGACTGTTCGATCGAGACTCGAATGGAGAAGTTGATTTTGATGAGTTCATGAGTGGAACCAAGAAGATGATGCTTGCCATTGCTGACGGAGTCGGG
GTTTTGCCGATCCAAATGGCGTTGGAAGAGGATAGTTTCTTGATGAAAGCCGTTCTTAGAGAAGCCGCCAAAGCAGTTGCTTGA
Protein sequenceShow/hide protein sequence
MSVQLLDGTTILNFVQDEEAFHASVRERFKCLDTDGDGVLSYKEMLKEMQSLRVRETDFGVDVKPDPEELASLYGIVFGLFDRDSNGEVDFDEFMSGTKKMMLAIADGVG
VLPIQMALEEDSFLMKAVLREAAKAVA