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Sed0013418 (gene) of Chayote v1 genome

Gene IDSed0013418
OrganismSechium edule (Chayote v1)
DescriptionANK_REP_REGION domain-containing protein
Genome locationLG11:34595440..34597610
RNA-Seq ExpressionSed0013418
SyntenySed0013418
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_100397959.1 peptidoglycan-binding protein [Bacillus sp. FJAT-44742]7.4e-0550.52Show/hide
Query:  EEEAPGEQDTEEEAPGEQDMEEEAPGEQDMEEEAPGEQVMEEEAPGEQVMEEEDPWEQVMEEEDPWEQ-WDFLGHEENEAEPDFPVEEDYDEENPRD
        EEEAP E+  EEEAP E+ +EEEAP E+ +EEEAP E+  EEEAP E+  EEE P E+  EEE P E+  +     E  AE + P EE  +EE P +
Subjt:  EEEAPGEQDTEEEAPGEQDMEEEAPGEQDMEEEAPGEQVMEEEAPGEQVMEEEDPWEQVMEEEDPWEQ-WDFLGHEENEAEPDFPVEEDYDEENPRD

WP_204554148.1 hypothetical protein [Bacillus ectoiniformans]6.2e-0450.52Show/hide
Query:  TEEEAPGEQDTEEEAPGEQDMEEEAPGEQDMEEEAPGEQVMEEEAPGEQVMEEEDPWEQVMEEEDPWEQWDFLGHEENEAEPDFPVEEDYDEENPRD
        TEEEAP E+  EEEA  E+  EEEAP E+  EEEAP E+  EEEAP E+  EEE P E+  EEE   E+    G EE   E + P EE  +EE P +
Subjt:  TEEEAPGEQDTEEEAPGEQDMEEEAPGEQDMEEEAPGEQVMEEEAPGEQVMEEEDPWEQVMEEEDPWEQWDFLGHEENEAEPDFPVEEDYDEENPRD

WP_206020019.1 hypothetical protein, partial [Pseudomaricurvus alkylphenolicus]6.2e-0445.92Show/hide
Query:  DTEEEAPGEQDTEEEAPGEQDMEEEAPGEQDMEEEAPGEQVMEEEAPGEQVMEEEDPWEQVMEEEDPWEQWDFLGHEENEAEPDFPVEEDYDEENPRD
        + EEE P E++ EEE P E++ EEE P E++ EEE P E+  EEE P E+ +EE++P E+  EEE+P E+      EE E E D P EE+++EE P +
Subjt:  DTEEEAPGEQDTEEEAPGEQDMEEEAPGEQDMEEEAPGEQVMEEEAPGEQVMEEEDPWEQVMEEEDPWEQWDFLGHEENEAEPDFPVEEDYDEENPRD

XP_040666104.1 uncharacterized protein ASPVEDRAFT_81917 [Aspergillus versicolor CBS 583.65]8.1e-0444.9Show/hide
Query:  DTEEEAPGEQDTEEEAPGEQDMEEEAPGEQDMEEEAPGEQVMEEEAPGEQVMEEEDPWEQVMEEEDPWEQWDFLGHEENEAEPDFPVEEDYDEENPRD
        + EEE P ++D EEE P ++D EEE P E++ E+E P E+ +EEE P E+  EEEDP E+  EEE+P E+      EE E E + P +E+ ++E P D
Subjt:  DTEEEAPGEQDTEEEAPGEQDMEEEAPGEQDMEEEAPGEQVMEEEAPGEQVMEEEDPWEQVMEEEDPWEQWDFLGHEENEAEPDFPVEEDYDEENPRD

TrEMBL top hitse value%identityAlignment
A0A1L9PFU2 ANK_REP_REGION domain-containing protein3.9e-0444.9Show/hide
Query:  DTEEEAPGEQDTEEEAPGEQDMEEEAPGEQDMEEEAPGEQVMEEEAPGEQVMEEEDPWEQVMEEEDPWEQWDFLGHEENEAEPDFPVEEDYDEENPRD
        + EEE P ++D EEE P ++D EEE P E++ E+E P E+ +EEE P E+  EEEDP E+  EEE+P E+      EE E E + P +E+ ++E P D
Subjt:  DTEEEAPGEQDTEEEAPGEQDMEEEAPGEQDMEEEAPGEQVMEEEAPGEQVMEEEDPWEQVMEEEDPWEQWDFLGHEENEAEPDFPVEEDYDEENPRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTCATTTCGCTTGGTTCATAGATCGACGGAAGGCTGAGAAGTCCGCACAAGATCCGAAGAACACCCATCTAAGGAAAAAATTCGCTAAATCTGAAATATTCCT
CACTCCTGTTCGATTCCTTACTCTTAGGAAGGCGGCCATCGCTGGTATTTCCGCTGAACATTTGACAAAATCTGAAAGCACCGATCCAAGATCTGATATCTTCGATTCCT
CACTGATTGCTCTTAGGAAGGCGGCCCTGGCTGACACGGAGGAAGAAGCCCCCGGGGAGCAGGACACGGAGGAAGAAGCCCCCGGGGAGCAGGACATGGAGGAAGAAGCC
CCCGGGGAGCAGGACATGGAGGAAGAAGCCCCCGGGGAGCAGGTCATGGAGGAAGAAGCCCCCGGGGAGCAGGTCATGGAGGAAGAAGACCCCTGGGAGCAGGTCATGGA
GGAAGAAGACCCCTGGGAGCAATGGGATTTCTTAGGTCATGAAGAAAACGAGGCGGAGCCTGACTTCCCGGTGGAGGAGGATTACGACGAAGAAAACCCACGAGATTATT
CGTCAAGTGTCGTGTGGGGCAGTTCATGTAGTGGCATTGTCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTTCATTTCGCTTGGTTCATAGATCGACGGAAGGCTGAGAAGTCCGCACAAGATCCGAAGAACACCCATCTAAGGAAAAAATTCGCTAAATCTGAAATATTCCT
CACTCCTGTTCGATTCCTTACTCTTAGGAAGGCGGCCATCGCTGGTATTTCCGCTGAACATTTGACAAAATCTGAAAGCACCGATCCAAGATCTGATATCTTCGATTCCT
CACTGATTGCTCTTAGGAAGGCGGCCCTGGCTGACACGGAGGAAGAAGCCCCCGGGGAGCAGGACACGGAGGAAGAAGCCCCCGGGGAGCAGGACATGGAGGAAGAAGCC
CCCGGGGAGCAGGACATGGAGGAAGAAGCCCCCGGGGAGCAGGTCATGGAGGAAGAAGCCCCCGGGGAGCAGGTCATGGAGGAAGAAGACCCCTGGGAGCAGGTCATGGA
GGAAGAAGACCCCTGGGAGCAATGGGATTTCTTAGGTCATGAAGAAAACGAGGCGGAGCCTGACTTCCCGGTGGAGGAGGATTACGACGAAGAAAACCCACGAGATTATT
CGTCAAGTGTCGTGTGGGGCAGTTCATGTAGTGGCATTGTCAGATGA
Protein sequenceShow/hide protein sequence
MELHFAWFIDRRKAEKSAQDPKNTHLRKKFAKSEIFLTPVRFLTLRKAAIAGISAEHLTKSESTDPRSDIFDSSLIALRKAALADTEEEAPGEQDTEEEAPGEQDMEEEA
PGEQDMEEEAPGEQVMEEEAPGEQVMEEEDPWEQVMEEEDPWEQWDFLGHEENEAEPDFPVEEDYDEENPRDYSSSVVWGSSCSGIVR