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Sed0013424 (gene) of Chayote v1 genome

Gene IDSed0013424
OrganismSechium edule (Chayote v1)
DescriptionStress-response A/B barrel domain-containing protein
Genome locationLG05:20835369..20836085
RNA-Seq ExpressionSed0013424
SyntenySed0013424
Gene Ontology termsNA
InterPro domainsIPR011008 - Dimeric alpha-beta barrel
IPR013097 - Stress responsive alpha-beta barrel
IPR044662 - Stress-response A/B barrel domain-containing protein HS1/DABB1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035953.1 Stress-response A/B barrel domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]7.2e-4788.79Show/hide
Query:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI
        M GEFKHLVLVKFKEGA  G+ILKGMENLV+EIE +KSFEWGQEMEGPEMLTQGFTH FLMTFENKEAH+AF  HPKHVEFSATFSAAIEKIV+LDFPAI
Subjt:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI

Query:  RAKPPPS
        RAKPPPS
Subjt:  RAKPPPS

XP_008458618.1 PREDICTED: stress-response A/B barrel domain-containing protein At5g22580 [Cucumis melo]2.7e-4689.52Show/hide
Query:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI
        MG EFKHLVLVKFKEGA   +ILKGMENLVSE+E +KSFEWGQEMEGPEMLTQGFTH FLMTFENKEAHTAF+GHPKHVEFSATFSAAI+KIVVLDFPAI
Subjt:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI

Query:  RAKPP
        RAKPP
Subjt:  RAKPP

XP_022958177.1 stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita moschata]7.2e-4788.79Show/hide
Query:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI
        M GEFKHLVLVKFKEGA  G+ILKGMENLV+EIE +KSFEWGQEMEGPEMLTQGFTH FLMTFENKEAH+AF  HPKHVEFSATFSAAIEKIV+LDFPAI
Subjt:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI

Query:  RAKPPPS
        RAKPPPS
Subjt:  RAKPPPS

XP_022986047.1 stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita maxima]1.0e-4585.98Show/hide
Query:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI
        MGGEFKHLVLVKFKEGA   +ILKGMENLVSE+E +KSFEWGQE+EGPEMLTQGFTH FLMTFENKEAH AF+GHPKHVEFSATFSAAIEKIV+LDFPAI
Subjt:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI

Query:  RAKPPPS
        R KP P+
Subjt:  RAKPPPS

XP_022995999.1 stress-response A/B barrel domain-containing protein At5g22580 [Cucurbita maxima]2.5e-4789.72Show/hide
Query:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI
        M GEFKHLVLVKFKEGA  G+ILKGMENLV+EIE +KSFEWGQEMEGPEMLTQGFTH FLMTFENKEAHTAF  HPKHVEFSATFSAAIEKIV+LDFPAI
Subjt:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI

Query:  RAKPPPS
        RAKPPPS
Subjt:  RAKPPPS

TrEMBL top hitse value%identityAlignment
A0A0A0KB18 Stress-response A/B barrel domain-containing protein1.3e-4689.52Show/hide
Query:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI
        MG EFKHLVLVKFKEGA   +ILKGMENLVSE+E +KSFEWGQEMEGPEMLTQGFTH FLMTFENKEAHTAF+GHPKHVEFSATFSAAI+KIVVLDFPAI
Subjt:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI

Query:  RAKPP
        RAKPP
Subjt:  RAKPP

A0A1S3C8U9 stress-response A/B barrel domain-containing protein At5g225801.3e-4689.52Show/hide
Query:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI
        MG EFKHLVLVKFKEGA   +ILKGMENLVSE+E +KSFEWGQEMEGPEMLTQGFTH FLMTFENKEAHTAF+GHPKHVEFSATFSAAI+KIVVLDFPAI
Subjt:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI

Query:  RAKPP
        RAKPP
Subjt:  RAKPP

A0A5A7SVA5 Dimeric alpha-beta barrel1.3e-4689.52Show/hide
Query:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI
        MG EFKHLVLVKFKEGA   +ILKGMENLVSE+E +KSFEWGQEMEGPEMLTQGFTH FLMTFENKEAHTAF+GHPKHVEFSATFSAAI+KIVVLDFPAI
Subjt:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI

Query:  RAKPP
        RAKPP
Subjt:  RAKPP

A0A6J1H156 stress-response A/B barrel domain-containing protein At5g22580-like3.5e-4788.79Show/hide
Query:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI
        M GEFKHLVLVKFKEGA  G+ILKGMENLV+EIE +KSFEWGQEMEGPEMLTQGFTH FLMTFENKEAH+AF  HPKHVEFSATFSAAIEKIV+LDFPAI
Subjt:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI

Query:  RAKPPPS
        RAKPPPS
Subjt:  RAKPPPS

A0A6J1K7H9 stress-response A/B barrel domain-containing protein At5g225801.2e-4789.72Show/hide
Query:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI
        M GEFKHLVLVKFKEGA  G+ILKGMENLV+EIE +KSFEWGQEMEGPEMLTQGFTH FLMTFENKEAHTAF  HPKHVEFSATFSAAIEKIV+LDFPAI
Subjt:  MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAI

Query:  RAKPPPS
        RAKPPPS
Subjt:  RAKPPPS

SwissProt top hitse value%identityAlignment
I6WU39 Olivetolic acid cyclase2.6e-0731.58Show/hide
Query:  KHLVLVKFKE---GAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDF
        KHL+++KFK+    A   +  K   NLV+ I  +K   WG+++   +   +G+TH   +TFE+ E    ++ HP HV F   + +  EK+++ D+
Subjt:  KHLVLVKFKE---GAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDF

Q9FK81 Stress-response A/B barrel domain-containing protein At5g225804.4e-3162.63Show/hide
Query:  FKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAIRAK
        FKHLV+VKFKE     +ILKG+ENLVS+I+ +KSFEWG++ E  +ML QGFTH F MTFENK+ + AF  HP HVEFSA F+A I+KIV+LDFP    K
Subjt:  FKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAIRAK

Q9LUV2 Stress-response A/B barrel domain-containing protein HS11.8e-1641.84Show/hide
Query:  GEFKHLVLVKFKEGA---MWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDF
        G  KH++L  FK+G       +++KG  NLV+ IE +K+F WG+++   E L QG+TH F  TFE+KEA   ++ HP HVEF+  F  +++K++V+D+
Subjt:  GEFKHLVLVKFKEGA---MWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDF

Arabidopsis top hitse value%identityAlignment
AT3G17210.1 heat stable protein 11.3e-1741.84Show/hide
Query:  GEFKHLVLVKFKEGA---MWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDF
        G  KH++L  FK+G       +++KG  NLV+ IE +K+F WG+++   E L QG+TH F  TFE+KEA   ++ HP HVEF+  F  +++K++V+D+
Subjt:  GEFKHLVLVKFKEGA---MWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDF

AT5G22580.1 Stress responsive A/B Barrel Domain3.1e-3262.63Show/hide
Query:  FKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAIRAK
        FKHLV+VKFKE     +ILKG+ENLVS+I+ +KSFEWG++ E  +ML QGFTH F MTFENK+ + AF  HP HVEFSA F+A I+KIV+LDFP    K
Subjt:  FKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAIRAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAGAGTTCAAGCACTTGGTGCTGGTGAAGTTTAAGGAAGGAGCGATGTGGGGAGACATTCTCAAAGGGATGGAGAATCTCGTCTCCGAAATCGAAGTC
ATCAAATCCTTTGAATGGGGGCAGGAGATGGAGGGACCAGAGATGCTTACACAGGGCTTCACACATACCTTCTTGATGACATTCGAGAACAAGGAAGCTCACACT
GCGTTTCTGGGGCATCCCAAGCATGTTGAATTCTCTGCAACTTTCTCCGCAGCCATCGAAAAGATTGTGGTGCTTGATTTCCCAGCTATCCGTGCCAAGCCACCT
CCATCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAGAGTTCAAGCACTTGGTGCTGGTGAAGTTTAAGGAAGGAGCGATGTGGGGAGACATTCTCAAAGGGATGGAGAATCTCGTCTCCGAAATCGAAGTC
ATCAAATCCTTTGAATGGGGGCAGGAGATGGAGGGACCAGAGATGCTTACACAGGGCTTCACACATACCTTCTTGATGACATTCGAGAACAAGGAAGCTCACACT
GCGTTTCTGGGGCATCCCAAGCATGTTGAATTCTCTGCAACTTTCTCCGCAGCCATCGAAAAGATTGTGGTGCTTGATTTCCCAGCTATCCGTGCCAAGCCACCT
CCATCACCTTGA
Protein sequenceShow/hide protein sequence
MGGEFKHLVLVKFKEGAMWGDILKGMENLVSEIEVIKSFEWGQEMEGPEMLTQGFTHTFLMTFENKEAHTAFLGHPKHVEFSATFSAAIEKIVVLDFPAIRAKPP
PSP