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Sed0013438 (gene) of Chayote v1 genome

Gene IDSed0013438
OrganismSechium edule (Chayote v1)
DescriptionPhytosulfokine-beta
Genome locationLG10:18536868..18537207
RNA-Seq ExpressionSed0013438
SyntenySed0013438
Gene Ontology termsGO:0008283 - cell population proliferation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR009438 - Phytosulfokine


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060965.1 phytosulfokines-like [Cucumis melo var. makuwa]1.5e-0748.28Show/hide
Query:  KPAAVLAIIAALVVTIS--ILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGD-TKP
        K AA+  IIAALV  +S  ++P+S  ARPI ++     +NPI   E+     ++   C+GL KEDCLI+RTL+AHIDY+Y+ D TKP
Subjt:  KPAAVLAIIAALVVTIS--ILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGD-TKP

KAG6585714.1 Phytosulfokine, partial [Cucurbita argyrosperma subsp. sororia]3.8e-0650Show/hide
Query:  MSKPAAVLAIIAALVVTISILPASSVARPI-TAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTK
        MSK  A+ +++A  +VT+S+L +SS ARPI T+   +   N IA   VSEKG HD+ VC+G + ++CL +RT+EAH DYIY+ DTK
Subjt:  MSKPAAVLAIIAALVVTISILPASSVARPI-TAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTK

KAG6598323.1 Phytosulfokine, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0650Show/hide
Query:  MSKPAAVLAIIAALVVTISILPASSVARPITAI--LGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTKP
        MSK AA+  I  A +V++S++  SS ARPIT +    A   NP+ +          E VC    K+DCLIRRTLEAH DYIYSGDTKP
Subjt:  MSKPAAVLAIIAALVVTISILPASSVARPITAI--LGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTKP

XP_022131649.1 uncharacterized protein LOC111004777 [Momordica charantia]5.8e-0752.33Show/hide
Query:  MSKPAAVLAIIAALVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTKP
        MSK  A L  IAAL +T+S+L  SS ARPIT    +A+   IA P+ S+   H++G  +  + +DCL RRTLEAH DYIYSG+TKP
Subjt:  MSKPAAVLAIIAALVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTKP

XP_023546620.1 phytosulfokines-like [Cucurbita pepo subsp. pepo]2.8e-0953.95Show/hide
Query:  IAALVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTKP
        +AAL    ++L  SS ARPI  +   A+   IA P V+E+    +G C+G +K+DCLIRRTLEAH DYIYSGDTKP
Subjt:  IAALVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTKP

TrEMBL top hitse value%identityAlignment
A0A1S4AR20 Phytosulfokine-beta3.8e-0441.18Show/hide
Query:  LVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYS
        LV  +      S ARP + ++ A  ++        +K  +DEG+C+G+++EDCL RRT+EAHIDYIY+
Subjt:  LVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYS

A0A1U7X3S7 Phytosulfokine-beta2.9e-0441.18Show/hide
Query:  LVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYS
        LV  +      S ARP + ++ A  ++        +K  +DEG+C+G+++EDCL RRT+EAHIDYIY+
Subjt:  LVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYS

A0A2U1NSB2 Phytosulfokine-beta3.8e-0441.57Show/hide
Query:  MSKPAAVLAIIAALVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGV---CKGLQKEDCLIRRTLEAHIDYIYSGDTKP
        MSK A  L +I AL+++ ++   S  ARPI  I  AA+  P     +  K  + + V   C+G++KE+CL RRTL AH+DYIY+ D  P
Subjt:  MSKPAAVLAIIAALVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGV---CKGLQKEDCLIRRTLEAHIDYIYSGDTKP

A0A5A7V550 Phytosulfokine-beta7.4e-0848.28Show/hide
Query:  KPAAVLAIIAALVVTIS--ILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGD-TKP
        K AA+  IIAALV  +S  ++P+S  ARPI ++     +NPI   E+     ++   C+GL KEDCLI+RTL+AHIDY+Y+ D TKP
Subjt:  KPAAVLAIIAALVVTIS--ILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGD-TKP

A0A6J1BQV2 Phytosulfokine-beta2.8e-0752.33Show/hide
Query:  MSKPAAVLAIIAALVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTKP
        MSK  A L  IAAL +T+S+L  SS ARPIT    +A+   IA P+ S+   H++G  +  + +DCL RRTLEAH DYIYSG+TKP
Subjt:  MSKPAAVLAIIAALVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTKP

SwissProt top hitse value%identityAlignment
Q9FS10 Phytosulfokines1.6e-0437.04Show/hide
Query:  AVLAIIAALVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTKP
        A+  ++ AL+ ++S+  A   ARP+      ++++   +PE      HDE  C+G+ +E+CL+RRTL AH+DYIY+ D  P
Subjt:  AVLAIIAALVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTKP

Arabidopsis top hitse value%identityAlignment
AT3G49780.1 phytosulfokine 4 precursor7.6e-0551.52Show/hide
Query:  DEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTKP
        +E  C G+ +E+CLIRR+L  H DYIY+ + KP
Subjt:  DEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTKP

AT5G65870.1 phytosulfokine 5 precursor2.2e-0443.64Show/hide
Query:  AASRNPIAL-PEVS--EKGAHDEGVCKGLQKEDC-LIRRTLEAHIDYIYSGDTKP
        +A  NP ++ PE +  +K    E +C+G+ +E+C LIRRTL AH DYIY+ +  P
Subjt:  AASRNPIAL-PEVS--EKGAHDEGVCKGLQKEDC-LIRRTLEAHIDYIYSGDTKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGCCTGCGGCTGTGTTGGCCATTATTGCAGCACTTGTAGTTACAATCTCCATTCTGCCGGCCTCCTCTGTTGCTCGTCCGATCACTGCGATACTCGGTGCTGC
ATCCCGCAATCCAATCGCGCTTCCGGAGGTTTCTGAAAAGGGCGCTCATGATGAAGGCGTTTGCAAGGGACTACAGAAAGAGGACTGCCTGATTAGAAGAACCTTAGAGG
CTCATATTGATTACATCTATTCCGGAGACACCAAGCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAGCCTGCGGCTGTGTTGGCCATTATTGCAGCACTTGTAGTTACAATCTCCATTCTGCCGGCCTCCTCTGTTGCTCGTCCGATCACTGCGATACTCGGTGCTGC
ATCCCGCAATCCAATCGCGCTTCCGGAGGTTTCTGAAAAGGGCGCTCATGATGAAGGCGTTTGCAAGGGACTACAGAAAGAGGACTGCCTGATTAGAAGAACCTTAGAGG
CTCATATTGATTACATCTATTCCGGAGACACCAAGCCCTGA
Protein sequenceShow/hide protein sequence
MSKPAAVLAIIAALVVTISILPASSVARPITAILGAASRNPIALPEVSEKGAHDEGVCKGLQKEDCLIRRTLEAHIDYIYSGDTKP