; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013449 (gene) of Chayote v1 genome

Gene IDSed0013449
OrganismSechium edule (Chayote v1)
DescriptionER membrane protein complex subunit 6
Genome locationLG12:4581197..4587092
RNA-Seq ExpressionSed0013449
SyntenySed0013449
Gene Ontology termsGO:0006996 - organelle organization (biological process)
GO:0072546 - ER membrane protein complex (cellular component)
InterPro domainsIPR008504 - ER membrane protein complex subunit 6
IPR029008 - Rab5-interacting protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597582.1 ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]6.1e-4674.83Show/hide
Query:  RSSTHLQGQLPVRRRSLKNKALPFSARIDNNQLFLGIFLTSDHTPAEAMAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGI
        R +  L G+L  RR  L   A+    R     L L    ++D TP EAMAGYSS ASEKKSSDA DD+PI NAENLQ NLKIIYYSRTFLSIIGGVIAGI
Subjt:  RSSTHLQGQLPVRRRSLKNKALPFSARIDNNQLFLGIFLTSDHTPAEAMAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGI

Query:  LGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGLM
        LGFTSLTGFIFYFLVMAITSIGLAAKAGFSF+SYFESWNQILLDGFLSGLM
Subjt:  LGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGLM
KAG7029026.1 ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-4675.17Show/hide
Query:  LQGQLPVRRRSLKNKALPFSARIDNNQLFLGIFLTSDHTPAEAMAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTS
        L G+L  RR  L   A+    R     L L    ++D TP EAMAGYSS ASEKKSSDA DD+PI NAENLQ NLKIIYYSRTFLSIIGGVIAGILGFTS
Subjt:  LQGQLPVRRRSLKNKALPFSARIDNNQLFLGIFLTSDHTPAEAMAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTS

Query:  LTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGLMLSL
        LTGFIFYFLVMAITSIGLAAKAGFSF+SYFESWNQILLDGFLSGLM+ +
Subjt:  LTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGLMLSL
XP_022937062.1 ER membrane protein complex subunit 6 [Cucurbita moschata]1.4e-4294.17Show/hide
Query:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS
        MAGYSS ASEKKSSDA DD+PI NAENLQ NLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSF+SYFESWNQILLDGFLS
Subjt:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
XP_022972030.1 ER membrane protein complex subunit 6 [Cucurbita maxima]8.3e-4395.15Show/hide
Query:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS
        MAGYSS ASEKKSSDA DDLPI NAENLQ NLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSF+SYFESWNQILLDGFLS
Subjt:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
XP_038880512.1 ER membrane protein complex subunit 6 [Benincasa hispida]3.2e-4275.57Show/hide
Query:  ALPFSARIDNNQLFLGIFLTSDHTPAEAMAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITS
        ++P + ++D   L L   +   +T AE  AGYSS  SEKKSSDAADDLPIFNAENLQ NLKIIYYSRTFLSIIGGVIAGILGFT L GFIFYF+VMAITS
Subjt:  ALPFSARIDNNQLFLGIFLTSDHTPAEAMAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITS

Query:  IGLAAKAGFSFNSYFESWNQILLDGFLSGLM
        + LA KAGFSF SYFESWNQILLDGFLSGLM
Subjt:  IGLAAKAGFSFNSYFESWNQILLDGFLSGLM
TrEMBL top hitse value%identityAlignment
A0A0A0LZ06 ER membrane protein complex subunit 65.4e-4088.35Show/hide
Query:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS
        MAGYSS AS+KKSSD ADD+PIFNAENLQ NLKIIYYSRTFLSIIGGVIAG+LGFT LTGFIFYFLVMAITS+ LAAKAGFSF+SYFES NQIL DGFLS
Subjt:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
A0A1S3BQB0 ER membrane protein complex subunit 62.4e-4089.32Show/hide
Query:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS
        MAGYSS AS+KKSSD+ADD+PIFNAENLQ NLKIIYYSRTFLSIIGGVIAGILGFT LTGFIFYFLVMAITS+ LAAKAGFSF+SYFES NQILLDGFL 
Subjt:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
A0A6J1CBS9 ER membrane protein complex subunit 62.0e-4292.23Show/hide
Query:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS
        MAGYSSAASEKKS++AADD+PIFNAENLQ NLKIIYYSRTFLSIIGGVIAGILGFT LTGFI YFLVMAITS+GLAAKAGFSF+SYFESWNQILLDGFLS
Subjt:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
A0A6J1FFH8 ER membrane protein complex subunit 66.8e-4394.17Show/hide
Query:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS
        MAGYSS ASEKKSSDA DD+PI NAENLQ NLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSF+SYFESWNQILLDGFLS
Subjt:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
A0A6J1I7D9 ER membrane protein complex subunit 64.0e-4395.15Show/hide
Query:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS
        MAGYSS ASEKKSSDA DDLPI NAENLQ NLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSF+SYFESWNQILLDGFLS
Subjt:  MAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
SwissProt top hitse value%identityAlignment
Q3ZCG8 ER membrane protein complex subunit 61.5e-0739.02Show/hide
Query:  PIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGL
        P  +   ++GN  ++ Y RT +S + G  AGILG T L GFIFY L   + S+ L  KA   +N YF+S   +   G + GL
Subjt:  PIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGL
Q68EU8 ER membrane protein complex subunit 61.1e-0844Show/hide
Query:  LQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGL
        ++GN  ++ Y RT +S + G  AGILG TSL GFIFYFL   + S+ L  K+G  +N YF+S   +   G + GL
Subjt:  LQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGL
Q6GLC5 ER membrane protein complex subunit 61.8e-0842.67Show/hide
Query:  LQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGL
        ++GN  ++ Y RT +S + G  AGILG T+L GFIFYFL   + S+ L  K+G  +N YF+S   +   G + GL
Subjt:  LQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGL
Q9BV81 ER membrane protein complex subunit 61.4e-0840.24Show/hide
Query:  PIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGL
        P  +   ++GN  ++ Y RT +S + G  AGILG T L GFIFY L   + S+ L  KAG  +N YF+S   +   G + GL
Subjt:  PIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGL
Q9CQW0 ER membrane protein complex subunit 61.4e-0840.24Show/hide
Query:  PIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGL
        P  +   ++GN  ++ Y RT +S + G  AGILG T L GFIFY L   + S+ L  KAG  +N YF+S   +   G + GL
Subjt:  PIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGL
Arabidopsis top hitse value%identityAlignment
AT5G49540.1 Rab5-interacting family protein2.3e-3066.67Show/hide
Query:  ASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGLM
        +SEK+S D   D+P F+AENLQ NLK+I  SRTFLSII GV+AGI+GF  L GF+FYF+VM ITS+GL AKAGFS + YF+SWN++L DGFL GLM
Subjt:  ASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGLM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAAGGGCGGAGTTCTACTCATCTACAAGGTCAGCTGCCAGTTCGACGACGCTCTTTGAAGAACAAAGCCTTACCATTCTCCGCTCGGATCGATAACAATCAACT
GTTTCTCGGCATTTTTTTAACTTCAGATCATACACCGGCGGAGGCTATGGCTGGTTATTCCTCCGCTGCTTCCGAGAAGAAATCGTCTGACGCGGCCGACGATTTGCCGA
TCTTCAATGCTGAAAATTTGCAGGGAAATTTGAAGATTATCTATTACAGCCGGACGTTTTTGTCTATAATTGGGGGAGTAATTGCTGGAATTTTGGGATTCACAAGCCTG
ACTGGATTTATATTTTATTTCCTAGTCATGGCAATCACTTCAATTGGACTTGCAGCTAAGGCTGGATTCTCCTTCAATTCGTATTTCGAAAGCTGGAACCAGATTCTGCT
TGATGGCTTTTTGAGTGGTCTTATGCTTTCTTTGTCGAGAAAAGGAATAAGCGGATCGAAAGGTACTTATCTCTTTGCGATGGCCCTTCTGAACACCCTTCTTCAAGCAA
CAGATATCTGTTTGTGGTCCCCTCCTACGCTAGGGGATTATCTGTGTAGAACATCTTTTGTTGGGATTTCTCTTACTAGAAAAGACAAAAACCTTCTGGAGGATTGCGAT
TTCAATTGGATTTTTCTGTTAGGTATTTGGTTGAAAAACTTTGATATTACCTTTTCCACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCAAGGGCGGAGTTCTACTCATCTACAAGGTCAGCTGCCAGTTCGACGACGCTCTTTGAAGAACAAAGCCTTACCATTCTCCGCTCGGATCGATAACAATCAACT
GTTTCTCGGCATTTTTTTAACTTCAGATCATACACCGGCGGAGGCTATGGCTGGTTATTCCTCCGCTGCTTCCGAGAAGAAATCGTCTGACGCGGCCGACGATTTGCCGA
TCTTCAATGCTGAAAATTTGCAGGGAAATTTGAAGATTATCTATTACAGCCGGACGTTTTTGTCTATAATTGGGGGAGTAATTGCTGGAATTTTGGGATTCACAAGCCTG
ACTGGATTTATATTTTATTTCCTAGTCATGGCAATCACTTCAATTGGACTTGCAGCTAAGGCTGGATTCTCCTTCAATTCGTATTTCGAAAGCTGGAACCAGATTCTGCT
TGATGGCTTTTTGAGTGGTCTTATGCTTTCTTTGTCGAGAAAAGGAATAAGCGGATCGAAAGGTACTTATCTCTTTGCGATGGCCCTTCTGAACACCCTTCTTCAAGCAA
CAGATATCTGTTTGTGGTCCCCTCCTACGCTAGGGGATTATCTGTGTAGAACATCTTTTGTTGGGATTTCTCTTACTAGAAAAGACAAAAACCTTCTGGAGGATTGCGAT
TTCAATTGGATTTTTCTGTTAGGTATTTGGTTGAAAAACTTTGATATTACCTTTTCCACTTCTTAACGGCATGTAAGATGGTTATCTTTTAATATTTGTGACTGCTCGGG
CTATCTCACATGCACCTTGACTATTTTCATAAGTCAAGGGAAACCGCTGACCTTACTAAGCTTGTCAAGGAAACTTGTAAGAAATTGATTTTTAGGTAGGTGTAACTATC
ATGGATTGAAGTTTGAACATATTCATTCTCTAGATGGGGTTTCTTAAGAATCCCTGAATTTTAGAGTTTCTAAAAGGTCGGAATAACCTCTCATCATCTTTCAGTAGAGA
CTAGAGAGCACAATTCTCTGTTAGACTTTGACAGGGAAAAATAAAGGTCTCATTTGATAACCATTTTGCTTTTGAAATTTAAGCCTACAACAACTATTTCATCATATATT
TTTTTTTTACTTGGGTATGTACATTTTACCTATATTTTTAGAAATCAAACTAAAATTTAAGAACAAAAAAAAGTAGGTTCCAAAAGCTTGATTATTTTTTTGAAATTTAG
TTAGTATTCACATCATTTTCTTAAGGAAAGATAAAAAAACATTGTAGGAAAGATAGAACATACGAGTTGAGTAAAAGTAAACTTAAATTTAAAAAAAACAGAAAATAGAA
TGGTAATCAAACGGGGGAAAGCACTTTCATCATGTTATTTGTTCTGAGTCAATCTGTTTCTTTTCATGTGTTTTGGTATGCAATAGCCTAACGCCACCTTTTGTTTTGAT
TTTGCAGTCGTTCGTGCTCTTCTGGACGTATCCTGTCCATAACTTTATAGTTTATATAATCTCTGATAAGTATACCATTAGTATGTTTGGGACAATCTTACAGTGTGATA
AAAAATGTTTTCTTTCTTTTTCTTTTTCTTTTTTCTTTCAAAAAAGTGATTTTCTTTTTGGCCAACTCGAATACTTTTCTAAAATGTCGAACTTTACTCTAAAAAAAATA
ATTTGAAGTATTATTTTCCCAGAGAAAATACTTTTTCAGCATTTTCTTCTTAGAACTCCAAACCTATAGAACCAATCATGTTCAAGTAAGATCGTCGTATTTAATTAGAG
TTTGCTTTAAATAAACGCTTTAAAAAATAATAAACCTTGTTCTCATACCCACACGGTATAAGGCTTAATTTATTATACTTTGTGTATTGATTCCTGTATTTATTTGCTTT
ATTTCACGTTTCCACCAATCCAAATACTTGCTTCTATATTTTTTTTTAAAAAACAAAAAGCTTGCTTCTAGTAATTTGTTGGCACAACCTTACTTTACTTAACAAGATCT
GTACAACTGTGTACTTTGAGTTTTAAGAAATTATATATTGACCATGTTTTTCTTG
Protein sequenceShow/hide protein sequence
MSQGRSSTHLQGQLPVRRRSLKNKALPFSARIDNNQLFLGIFLTSDHTPAEAMAGYSSAASEKKSSDAADDLPIFNAENLQGNLKIIYYSRTFLSIIGGVIAGILGFTSL
TGFIFYFLVMAITSIGLAAKAGFSFNSYFESWNQILLDGFLSGLMLSLSRKGISGSKGTYLFAMALLNTLLQATDICLWSPPTLGDYLCRTSFVGISLTRKDKNLLEDCD
FNWIFLLGIWLKNFDITFSTS