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Sed0013455 (gene) of Chayote v1 genome

Gene IDSed0013455
OrganismSechium edule (Chayote v1)
DescriptionUPF0057 membrane protein
Genome locationLG03:46187350..46188261
RNA-Seq ExpressionSed0013455
SyntenySed0013455
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158160.1 UPF0057 membrane protein At2g24040-like [Momordica charantia]4.6e-3593.59Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV
        MANGCEICCEILIAIL+PPLGVCLKHGCCTVEFCLCLILTLLGY+PGIIYALY IVFVDRD+FFDEYRRPLYAPVS V
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV

XP_022938010.1 UPF0057 membrane protein At4g30660-like [Cucurbita moschata]1.9e-3392.31Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV
        MANGCEI CEILIAIL+PPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALY+IVFVDRD FFDEYRRPLY+PV TV
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV

XP_022946545.1 UPF0057 membrane protein At2g24040-like [Cucurbita moschata]4.3e-3389.74Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV
        MANGCEICCEILIAIL+PPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALY IV+VDRD+FFDEYRRPLY+  S V
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV

XP_022969587.1 UPF0057 membrane protein At4g30660-like [Cucurbita maxima]1.6e-3291.03Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV
        MAN CEI CEILIAIL+PPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALY+IVFVDRD FFDEYRRPLY+PV TV
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV

XP_038890692.1 UPF0057 membrane protein At4g30660-like [Benincasa hispida]3.0e-3493.59Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV
        MANGCEICCEILIAIL+PPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALY IVFVDRD+FFDEYRRPLYAP STV
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV

TrEMBL top hitse value%identityAlignment
A0A6J1DV17 UPF0057 membrane protein At2g24040-like2.2e-3593.59Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV
        MANGCEICCEILIAIL+PPLGVCLKHGCCTVEFCLCLILTLLGY+PGIIYALY IVFVDRD+FFDEYRRPLYAPVS V
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV

A0A6J1FBZ3 UPF0057 membrane protein At4g30660-like9.3e-3492.31Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV
        MANGCEI CEILIAIL+PPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALY+IVFVDRD FFDEYRRPLY+PV TV
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV

A0A6J1G463 UPF0057 membrane protein At2g24040-like2.1e-3389.74Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV
        MANGCEICCEILIAIL+PPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALY IV+VDRD+FFDEYRRPLY+  S V
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV

A0A6J1HWQ4 UPF0057 membrane protein At4g30660-like7.9e-3391.03Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV
        MAN CEI CEILIAIL+PPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALY+IVFVDRD FFDEYRRPLY+PV TV
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV

A0A6J1KI35 UPF0057 membrane protein At2g24040-like2.1e-3389.74Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV
        MANGCEICCEILIAIL+PPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALY IV+VDRD+FFDEYRRPLY+  S V
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV

SwissProt top hitse value%identityAlignment
O82232 UPF0057 membrane protein At2g240403.3e-2876.39Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLY
        MA+ CE+CCEI IAILLPP+GVCL+HGCCTVEF +CLILT LGY+PGIIYA+Y I F+ RDE+FDEYRRP+Y
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLY

Q9LRI7 Hydrophobic protein OSR82.2e-1660.29Show/hide
Query:  MANG-CEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEY
        MA+G C    EIL+AI+LPPLGV L+ GCC++EFC+CL+LT+LGY+PGIIYA+Y +V +D D++  EY
Subjt:  MANG-CEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEY

Q9M095 UPF0057 membrane protein At4g306504.3e-2077.05Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRD
        MA+  E+ CEILIAILLPPLGVCLK GCCTVEF +CL+LT+LGYIPGIIYALY IVF +R+
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRD

Q9SUI0 UPF0057 membrane protein At4g306604.0e-2671.23Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYA
        M + CEI CEI+IAILLPPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R+E+FDEYRRP+Y+
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYA

Q9ZNQ7 Hydrophobic protein RCI2A5.3e-1071.74Show/hide
Query:  EILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTI
        +I+IAILLPPLGV L+ G C VEF +CL+LTLLGYIPGIIYA+Y +
Subjt:  EILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTI

Arabidopsis top hitse value%identityAlignment
AT2G24040.1 Low temperature and salt responsive protein family2.4e-2976.39Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLY
        MA+ CE+CCEI IAILLPP+GVCL+HGCCTVEF +CLILT LGY+PGIIYA+Y I F+ RDE+FDEYRRP+Y
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLY

AT4G28088.1 Low temperature and salt responsive protein family6.0e-3384.72Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLY
        MANGCEICCEI+IAIL+PPLGVCL+HGCCT EF +CLILTLLGY+PGIIYALY IV+VDRD+FFDEYRRPL+
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLY

AT4G30650.1 Low temperature and salt responsive protein family3.1e-2177.05Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRD
        MA+  E+ CEILIAILLPPLGVCLK GCCTVEF +CL+LT+LGYIPGIIYALY IVF +R+
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRD

AT4G30660.1 Low temperature and salt responsive protein family2.9e-2771.23Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYA
        M + CEI CEI+IAILLPPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R+E+FDEYRRP+Y+
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYA

AT4G30660.2 Low temperature and salt responsive protein family2.9e-2771.23Show/hide
Query:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYA
        M + CEI CEI+IAILLPPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R+E+FDEYRRP+Y+
Subjt:  MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACGGATGTGAGATCTGCTGCGAGATTCTCATCGCCATTCTCCTTCCTCCTCTCGGAGTCTGCCTCAAACACGGCTGTTGCACGGTGGAGTTTTGCCTGTGTTT
GATTTTGACTCTGCTCGGCTACATTCCGGGGATCATCTACGCTCTGTACACGATCGTGTTCGTCGATCGCGATGAGTTCTTCGACGAGTACAGGCGGCCGCTCTACGCGC
CTGTGTCGACGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAACGGATGTGAGATCTGCTGCGAGATTCTCATCGCCATTCTCCTTCCTCCTCTCGGAGTCTGCCTCAAACACGGCTGTTGCACGGTGGAGTTTTGCCTGTGTTT
GATTTTGACTCTGCTCGGCTACATTCCGGGGATCATCTACGCTCTGTACACGATCGTGTTCGTCGATCGCGATGAGTTCTTCGACGAGTACAGGCGGCCGCTCTACGCGC
CTGTGTCGACGGTGTAG
Protein sequenceShow/hide protein sequence
MANGCEICCEILIAILLPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYTIVFVDRDEFFDEYRRPLYAPVSTV