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Sed0013471 (gene) of Chayote v1 genome

Gene IDSed0013471
OrganismSechium edule (Chayote v1)
DescriptionTranscription and mRNA export factor ENY2
Genome locationLG04:736714..739571
RNA-Seq ExpressionSed0013471
SyntenySed0013471
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006368 - transcription elongation from RNA polymerase II promoter (biological process)
GO:0015031 - protein transport (biological process)
GO:0016578 - histone deubiquitination (biological process)
GO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005643 - nuclear pore (cellular component)
GO:0070390 - transcription export complex 2 (cellular component)
GO:0071819 - DUBm complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR018783 - Transcription factor, enhancer of yellow 2
IPR038212 - Transcription factor EnY2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020143.1 Transcription and mRNA export factor SUS1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-4669.93Show/hide
Query:  RRLESAGESLEQWDALCRRESEKFQESLIVIAHIQCKFLADFWRASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMK
        RRL+SAGESLE                                R SINRPPTP+ EDDR+ QPTFQE+++IKLIESGEKERLKE LRERLIECGWKDEMK
Subjt:  RRLESAGESLEQWDALCRRESEKFQESLIVIAHIQCKFLADFWRASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMK

Query:  ALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQRIRSFLASTAI
        ALCRA+VRKKGRN+VSVDDLVQVITP GRASVPDSVKAELLQRIR+FLASTAI
Subjt:  ALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQRIRSFLASTAI

XP_008445505.1 PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo]3.1e-4690.91Show/hide
Query:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR
        RASINRPPTP+ EDDR+ QPTFQES++IKLIESGEKERLKE LRERLIECGWKDEMKALCRA+VRKKGRN+VSVDDLVQVITP GRASVPDSVKAELLQR
Subjt:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR

Query:  IRSFLASTAI
        IRSFLASTAI
Subjt:  IRSFLASTAI

XP_011657386.1 transcription and mRNA export factor ENY2 [Cucumis sativus]9.0e-4690Show/hide
Query:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR
        RASINRPPTP+ EDDR+ QPTFQES++IKLIESGEKERLKE LRERLIECGWKDEMKALCRA+VRKKGRN+VSVDDLVQVITP GRASVPDSVKAELLQR
Subjt:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR

Query:  IRSFLASTAI
        IRSFL STAI
Subjt:  IRSFLASTAI

XP_022951096.1 transcription and mRNA export factor SUS1 [Cucurbita moschata]1.5e-4589.09Show/hide
Query:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR
        R SINRPPTP+ EDDR+ QPTFQE+++IKLIESGEKERLKE LRERLIECGWKDEMKALCRA+VRKKGRN+VSVDDLVQVITP GRASVPDSVKAELLQR
Subjt:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR

Query:  IRSFLASTAI
        IRSFLASTAI
Subjt:  IRSFLASTAI

XP_038884208.1 transcription and mRNA export factor ENY2 [Benincasa hispida]2.6e-4589.09Show/hide
Query:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR
        RASINRPPTP+ EDDR+  PTFQE+++IKLIESGEKERLKE LRERLIECGWKDEMKALCRA+VRKKGRN+VSVDDLVQVITP GRASVPDSVKAELLQR
Subjt:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR

Query:  IRSFLASTAI
        IRSFLASTAI
Subjt:  IRSFLASTAI

TrEMBL top hitse value%identityAlignment
A0A0A0KIM7 Transcription and mRNA export factor ENY24.4e-4690Show/hide
Query:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR
        RASINRPPTP+ EDDR+ QPTFQES++IKLIESGEKERLKE LRERLIECGWKDEMKALCRA+VRKKGRN+VSVDDLVQVITP GRASVPDSVKAELLQR
Subjt:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR

Query:  IRSFLASTAI
        IRSFL STAI
Subjt:  IRSFLASTAI

A0A1S3BDR5 Transcription and mRNA export factor ENY21.5e-4690.91Show/hide
Query:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR
        RASINRPPTP+ EDDR+ QPTFQES++IKLIESGEKERLKE LRERLIECGWKDEMKALCRA+VRKKGRN+VSVDDLVQVITP GRASVPDSVKAELLQR
Subjt:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR

Query:  IRSFLASTAI
        IRSFLASTAI
Subjt:  IRSFLASTAI

A0A6J1BSW0 Transcription and mRNA export factor ENY22.2e-4589.09Show/hide
Query:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR
        RASINRPPTP+ EDDRD Q TFQE+++IKLIESGEKERLKE LRERLIECGWKDEMKALCRA+VRKKGRN+VSVDDLVQVITP GRASVPDSVKAELLQR
Subjt:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR

Query:  IRSFLASTAI
        IRSFL STAI
Subjt:  IRSFLASTAI

A0A6J1GGQ4 Transcription and mRNA export factor ENY27.4e-4689.09Show/hide
Query:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR
        R SINRPPTP+ EDDR+ QPTFQE+++IKLIESGEKERLKE LRERLIECGWKDEMKALCRA+VRKKGRN+VSVDDLVQVITP GRASVPDSVKAELLQR
Subjt:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR

Query:  IRSFLASTAI
        IRSFLASTAI
Subjt:  IRSFLASTAI

A0A6J1KQ41 Transcription and mRNA export factor ENY21.7e-4588.18Show/hide
Query:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR
        R SINRPPTP+ EDDR+ QPTFQE+++IKLIESGEKERLKE LRERLIECGWKDEMKALCRA+VRKKGRN+VSVDDLVQVITP GRASVPDSVKAELLQR
Subjt:  RASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQR

Query:  IRSFLASTAI
        IR+FLASTAI
Subjt:  IRSFLASTAI

SwissProt top hitse value%identityAlignment
B5FZ63 Transcription and mRNA export factor ENY23.8e-2364.71Show/hide
Query:  SVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQRIRSFLASTA
        +++ KLIE+GE+ERLKE LR +LIECGWKD++KA C+  +++KG   V+VDDLV  ITP GRA VPDSVK ELLQRIR+FLA  A
Subjt:  SVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQRIRSFLASTA

Q3ZBJ0 Transcription and mRNA export factor ENY22.9e-2364.71Show/hide
Query:  SVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQRIRSFLASTA
        +++ KLIE+GE+ERLKE LR +LIECGWKD++KA C+  +++KG   V+VDDLV  ITP GRA VPDSVK ELLQRIR+FLA  A
Subjt:  SVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQRIRSFLASTA

Q6NQ54 Transcription and mRNA export factor ENY21.6e-3260.71Show/hide
Query:  SINRPPTPDLEDDRD----PQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELL
        S+NRPPTPD +D  D     + T +E +++KL+ESGEKE L E +R+RL+ECGWKDEM+  CR HV+KKGR  V+VD+L++VITP GRASVPDSVKAELL
Subjt:  SINRPPTPDLEDDRD----PQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELL

Query:  QRIRSFLASTAI
         RI++F+ S A+
Subjt:  QRIRSFLASTAI

Q9JIX0 Transcription and mRNA export factor ENY22.9e-2364.71Show/hide
Query:  SVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQRIRSFLASTA
        +++ KLIE+GE+ERLKE LR +LIECGWKD++KA C+  +++KG   V+VDDLV  ITP GRA VPDSVK ELLQRIR+FLA  A
Subjt:  SVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQRIRSFLASTA

Q9NPA8 Transcription and mRNA export factor ENY22.9e-2364.71Show/hide
Query:  SVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQRIRSFLASTA
        +++ KLIE+GE+ERLKE LR +LIECGWKD++KA C+  +++KG   V+VDDLV  ITP GRA VPDSVK ELLQRIR+FLA  A
Subjt:  SVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQRIRSFLASTA

Arabidopsis top hitse value%identityAlignment
AT3G27100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).1.1e-3360.71Show/hide
Query:  SINRPPTPDLEDDRD----PQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELL
        S+NRPPTPD +D  D     + T +E +++KL+ESGEKE L E +R+RL+ECGWKDEM+  CR HV+KKGR  V+VD+L++VITP GRASVPDSVKAELL
Subjt:  SINRPPTPDLEDDRD----PQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELL

Query:  QRIRSFLASTAI
         RI++F+ S A+
Subjt:  QRIRSFLASTAI

AT3G27100.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).2.1e-2456.04Show/hide
Query:  SINRPPTPDLEDDRD----PQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASV
        S+NRPPTPD +D  D     + T +E +++KL+ESGEKE L E +R+RL+ECGWKDEM+  CR HV+KKGR  V+VD+L++VITP GR  +
Subjt:  SINRPPTPDLEDDRD----PQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCRAHVRKKGRNSVSVDDLVQVITPIGRASV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCCCGCCGTTTATCGTCGTCTCGAGTCAGCTGGCGAGTCTCTTGAGCAGTGGGACGCGCTCTGTCGCCGTGAAAGTGAAAAGTTTCAAGAATCTCTCATCGTAAT
CGCTCATATACAATGTAAGTTTCTCGCAGATTTCTGGAGGGCTTCCATTAATCGGCCTCCGACGCCAGATCTGGAGGATGATCGAGATCCTCAGCCGACTTTTCAAGAAT
CAGTCAGTATCAAGCTGATCGAAAGTGGCGAAAAAGAGCGGCTTAAAGAGCATTTGAGAGAGAGACTAATCGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGG
GCACATGTAAGGAAGAAAGGAAGGAACAGTGTTAGTGTTGATGACCTTGTGCAGGTCATTACTCCAATAGGCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCT
GCAGCGCATCCGATCATTCCTTGCATCAACAGCTATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATCCCGCCGTTTATCGTCGTCTCGAGTCAGCTGGCGAGTCTCTTGAGCAGTGGGACGCGCTCTGTCGCCGTGAAAGTGAAAAGTTTCAAGAATCTCTCATCGTAAT
CGCTCATATACAATGTAAGTTTCTCGCAGATTTCTGGAGGGCTTCCATTAATCGGCCTCCGACGCCAGATCTGGAGGATGATCGAGATCCTCAGCCGACTTTTCAAGAAT
CAGTCAGTATCAAGCTGATCGAAAGTGGCGAAAAAGAGCGGCTTAAAGAGCATTTGAGAGAGAGACTAATCGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGG
GCACATGTAAGGAAGAAAGGAAGGAACAGTGTTAGTGTTGATGACCTTGTGCAGGTCATTACTCCAATAGGCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCT
GCAGCGCATCCGATCATTCCTTGCATCAACAGCTATATGA
Protein sequenceShow/hide protein sequence
MYPAVYRRLESAGESLEQWDALCRRESEKFQESLIVIAHIQCKFLADFWRASINRPPTPDLEDDRDPQPTFQESVSIKLIESGEKERLKEHLRERLIECGWKDEMKALCR
AHVRKKGRNSVSVDDLVQVITPIGRASVPDSVKAELLQRIRSFLASTAI