; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013476 (gene) of Chayote v1 genome

Gene IDSed0013476
OrganismSechium edule (Chayote v1)
DescriptionDUF4228 domain-containing protein
Genome locationLG12:3034199..3035211
RNA-Seq ExpressionSed0013476
SyntenySed0013476
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581636.1 hypothetical protein SDJN03_21638, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4855.24Show/hide
Query:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF
        + NM+SW  SCFHL     T IP       + + NI LI S G V +Y++PI VS ++L+FPKH +CRSD+F IG+KIP LS H  L+ GH YFLLP  F
Subjt:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF

Query:  FHSVLSFLTVASFFS---------SAAAVSRRPFDILRAPSGALRIRLSDEFISALLEQGSPS--FETHKKQSKICTTPQLAKDYTQLATRRQWKPKLDT
        FHSVLSF+++ASFFS         + AA    PFD+ R PSG LRIR+SDEFIS LLEQG+P         Q KICTTPQLAK+YTQL   R+WKPKL+T
Subjt:  FHSVLSFLTVASFFS---------SAAAVSRRPFDILRAPSGALRIRLSDEFISALLEQGSPS--FETHKKQSKICTTPQLAKDYTQLATRRQWKPKLDT

Query:  IRERKKKKSI
        I E KKK  I
Subjt:  IRERKKKKSI

KAG6581637.1 hypothetical protein SDJN03_21639, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4855.24Show/hide
Query:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF
        + NM+SW  SCFHL     T IP       + + NI LI S G V +Y++PI VS ++L+FPKH +CRSD+F IG+KIP LS H  L+ GH YFLLP  F
Subjt:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF

Query:  FHSVLSFLTVASFFS---------SAAAVSRRPFDILRAPSGALRIRLSDEFISALLEQGSPS--FETHKKQSKICTTPQLAKDYTQLATRRQWKPKLDT
        FHSVLSF+++ASFFS         + AA    PFD+ R PSG LRIR+SDEFIS LLEQG+P         Q KICTTPQLAK+YTQL   R+WKPKL+T
Subjt:  FHSVLSFLTVASFFS---------SAAAVSRRPFDILRAPSGALRIRLSDEFISALLEQGSPS--FETHKKQSKICTTPQLAKDYTQLATRRQWKPKLDT

Query:  IRERKKKKSI
        I E KKK  I
Subjt:  IRERKKKKSI

XP_011652332.1 uncharacterized protein LOC105435015 [Cucumis sativus]3.2e-4954.02Show/hide
Query:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF
        + NM+SW  SCFHL+ N     P +     + + NI LIHSDG V IY++PI VS+++L+FPKH +CRSDSF IG+KIP LS    L+ GH YFLLP+ F
Subjt:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF

Query:  FHSVLSFLTVASFFSSA-----------AAVSRRPFDILRAPSGALRIRLSDEFISALLEQGSPSFETHKKQS------KICTTPQLAKDYTQLATRRQW
        FHSVLSF+T+ASFFSS+           AA S  PFD+ R PSG L+IR+SD+FIS LLEQG+       +QS      KICTTPQLAKDYTQL   R+W
Subjt:  FHSVLSFLTVASFFSSA-----------AAVSRRPFDILRAPSGALRIRLSDEFISALLEQGSPSFETHKKQS------KICTTPQLAKDYTQLATRRQW

Query:  KPKLDTIRERKKKKSIRFVYKAKN
        KPKL+TI+E +KK+   F  K  N
Subjt:  KPKLDTIRERKKKKSIRFVYKAKN

XP_022972127.1 uncharacterized protein LOC111470759 [Cucurbita maxima]3.8e-5063.07Show/hide
Query:  NKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHFFHSVLSFLTVASFFSSAAAVS-RRPFDILRAP
        + NINLI  DG V IY++PI VSD++L+FP H ICR+DSF IG KIP L+ HHHL+ GHNYFLLP+HFFHSVLSFLTVASFFSS+       PF+I R P
Subjt:  NKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHFFHSVLSFLTVASFFSSAAAVS-RRPFDILRAP

Query:  SGALRIRLSDEFISALLEQGSPSFETHKKQSKICTTPQLAKDYTQLATRRQWKPKLDTIRERKKKKSIRFVYKAKN
        SG LRI LSD+FIS LL+QG+P  +  +   +ICTTPQLAKDYT+L  RRQWKPKL+TIRE +KK    F +   N
Subjt:  SGALRIRLSDEFISALLEQGSPSFETHKKQSKICTTPQLAKDYTQLATRRQWKPKLDTIRERKKKKSIRFVYKAKN

XP_038905326.1 uncharacterized protein LOC120091392 [Benincasa hispida]8.5e-5055.07Show/hide
Query:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF
        + NM+SW  SCFHL+ N    IP      +    NI LI+SDG V IY+QPI VS+++L+FPKH +CRSDSF IG+KIP LS    L+ GH YFLLP  F
Subjt:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF

Query:  FHSVLSFLTVASFFSSA-------------AAVSRRPFDILRAPSGALRIRLSDEFISALLEQG-SPSFETHKKQS------KICTTPQLAKDYTQLATR
        FHSVLSF+T+ASFFS++             AA   RPFD+ R PSG LRIR+SDEFIS LLEQG +P   +H++ +      KICTTPQLAKDYTQL   
Subjt:  FHSVLSFLTVASFFSSA-------------AAVSRRPFDILRAPSGALRIRLSDEFISALLEQG-SPSFETHKKQS------KICTTPQLAKDYTQLATR

Query:  RQWKPKLDTIRERKKKKSIRFVYKAKN
        RQWKPKL+TI E KKK+   F  K  N
Subjt:  RQWKPKLDTIRERKKKKSIRFVYKAKN

TrEMBL top hitse value%identityAlignment
A0A0A0LCN9 Uncharacterized protein1.6e-4954.02Show/hide
Query:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF
        + NM+SW  SCFHL+ N     P +     + + NI LIHSDG V IY++PI VS+++L+FPKH +CRSDSF IG+KIP LS    L+ GH YFLLP+ F
Subjt:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF

Query:  FHSVLSFLTVASFFSSA-----------AAVSRRPFDILRAPSGALRIRLSDEFISALLEQGSPSFETHKKQS------KICTTPQLAKDYTQLATRRQW
        FHSVLSF+T+ASFFSS+           AA S  PFD+ R PSG L+IR+SD+FIS LLEQG+       +QS      KICTTPQLAKDYTQL   R+W
Subjt:  FHSVLSFLTVASFFSSA-----------AAVSRRPFDILRAPSGALRIRLSDEFISALLEQGSPSFETHKKQS------KICTTPQLAKDYTQLATRRQW

Query:  KPKLDTIRERKKKKSIRFVYKAKN
        KPKL+TI+E +KK+   F  K  N
Subjt:  KPKLDTIRERKKKKSIRFVYKAKN

A0A1S3CNA0 uncharacterized protein LOC1035028301.3e-4854.3Show/hide
Query:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF
        + NM+SW  SCFHL+ N     P       + N NI LI SDG V IY++PI VS+++L+FPKH +CRSDSF IG+KIP LS    L+ GH YFLLP+ F
Subjt:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF

Query:  FHSVLSFLTVASFFSSA-----------AAVSRRPFDILRAPSGALRIRLSDEFISALLEQGS------PSFETHKKQSKICTTPQLAKDYTQLATRRQW
        FHSVLSF+T+ASFFSS+           AA    PFD+ R PSG LRIR+SDEFIS LLEQG+      P         KICTTPQLAKDYTQL   R+W
Subjt:  FHSVLSFLTVASFFSSA-----------AAVSRRPFDILRAPSGALRIRLSDEFISALLEQGS------PSFETHKKQSKICTTPQLAKDYTQLATRRQW

Query:  KPKLDTIRERKKKKSIRFVYK
        KPKL+TI+E +KK+   F  K
Subjt:  KPKLDTIRERKKKKSIRFVYK

A0A5D3CH36 DUF4228 domain-containing protein1.3e-4854.3Show/hide
Query:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF
        + NM+SW  SCFHL+ N     P       + N NI LI SDG V IY++PI VS+++L+FPKH +CRSDSF IG+KIP LS    L+ GH YFLLP+ F
Subjt:  IPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHF

Query:  FHSVLSFLTVASFFSSA-----------AAVSRRPFDILRAPSGALRIRLSDEFISALLEQGS------PSFETHKKQSKICTTPQLAKDYTQLATRRQW
        FHSVLSF+T+ASFFSS+           AA    PFD+ R PSG LRIR+SDEFIS LLEQG+      P         KICTTPQLAKDYTQL   R+W
Subjt:  FHSVLSFLTVASFFSSA-----------AAVSRRPFDILRAPSGALRIRLSDEFISALLEQGS------PSFETHKKQSKICTTPQLAKDYTQLATRRQW

Query:  KPKLDTIRERKKKKSIRFVYK
        KPKL+TI+E +KK+   F  K
Subjt:  KPKLDTIRERKKKKSIRFVYK

A0A6J1F4J4 uncharacterized protein LOC1114420991.1e-4754.98Show/hide
Query:  IPNMISWSLSCFHLLN-NNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSH
        + NM+SW  SCFHL      T IP       + + NI LI S G V +Y++PI VS+++L+FPKH +CRSD+F IG+KIP LS H  L+ GH YFLLP  
Subjt:  IPNMISWSLSCFHLLN-NNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSH

Query:  FFHSVLSFLTVASFFS---------SAAAVSRRPFDILRAPSGALRIRLSDEFISALLEQGSPS--FETHKKQSKICTTPQLAKDYTQLATRRQWKPKLD
        FFHSVLSF+++ASFFS         + AA    PFD+ R PSG LRIR+SDEFIS LLEQG+P         Q KICTTPQLAK+YTQL   R+WKPKL+
Subjt:  FFHSVLSFLTVASFFS---------SAAAVSRRPFDILRAPSGALRIRLSDEFISALLEQGSPS--FETHKKQSKICTTPQLAKDYTQLATRRQWKPKLD

Query:  TIRERKKKKSI
        TI E KKK  I
Subjt:  TIRERKKKKSI

A0A6J1I3Y3 uncharacterized protein LOC1114707591.8e-5063.07Show/hide
Query:  NKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHFFHSVLSFLTVASFFSSAAAVS-RRPFDILRAP
        + NINLI  DG V IY++PI VSD++L+FP H ICR+DSF IG KIP L+ HHHL+ GHNYFLLP+HFFHSVLSFLTVASFFSS+       PF+I R P
Subjt:  NKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHFFHSVLSFLTVASFFSSAAAVS-RRPFDILRAP

Query:  SGALRIRLSDEFISALLEQGSPSFETHKKQSKICTTPQLAKDYTQLATRRQWKPKLDTIRERKKKKSIRFVYKAKN
        SG LRI LSD+FIS LL+QG+P  +  +   +ICTTPQLAKDYT+L  RRQWKPKL+TIRE +KK    F +   N
Subjt:  SGALRIRLSDEFISALLEQGSPSFETHKKQSKICTTPQLAKDYTQLATRRQWKPKLDTIRERKKKKSIRFVYKAKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28190.1 unknown protein1.0e-2941.33Show/hide
Query:  INLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHFFHSVLSFLTVASF--------FSSAAAVSRRPFDI
        I L+ SDG + +Y++P+ VS+L   FPKH+ICRSD   IG+K P LS    LK G NYFLLPS FF + LSFLT+A+                  +PF I
Subjt:  INLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHFFHSVLSFLTVASF--------FSSAAAVSRRPFDI

Query:  LRAPSG-ALRIRLSDEFISALLEQGSPSFETHKK---------QSKICTTPQLAKDYTQLATRRQWKPKLDTIRERKKKKSIRFVYKAKNRIRLRV
         +   G  LRIR+S+EF+S L+ +G  +    ++         + ++CTT +L KDY QL   R+WKPKL+TI E K  K+       K R R  V
Subjt:  LRAPSG-ALRIRLSDEFISALLEQGSPSFETHKK---------QSKICTTPQLAKDYTQLATRRQWKPKLDTIRERKKKKSIRFVYKAKNRIRLRV

AT4G02090.1 unknown protein7.5e-0424.32Show/hide
Query:  LIHSDGRVTIYNQPIKVSDLILQFPKHQIC---------RSDSFTIGRKIPQLSGHHHLKPGHNYFLLP--------SHFFHSVLSFLTVASFFSSAAAV
        ++ SDGRV    +   V++++L+ P+H +           +D+ T+ RK+  L     L+PG  Y +LP        +    +VL+   +     SA A+
Subjt:  LIHSDGRVTIYNQPIKVSDLILQFPKHQIC---------RSDSFTIGRKIPQLSGHHHLKPGHNYFLLP--------SHFFHSVLSFLTVASFFSSAAAV

Query:  SRRPFDILRAPSGALRIRLSDEFISALLEQGSPSFETHKKQSKI--CTTPQLAKDYTQLATR----RQWKPKLDTIRERKKKKSI
         R  F             +   F +   +  +P+ +T    + +         +D  +  +R    R WKP LD IRE+K KK I
Subjt:  SRRPFDILRAPSGALRIRLSDEFISALLEQGSPSFETHKKQSKI--CTTPQLAKDYTQLATR----RQWKPKLDTIRERKKKKSI

AT4G37240.1 unknown protein7.5e-0425.93Show/hide
Query:  LIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHFFHSVLSFLTVASFFSSAAAVSRRPFDILRAPSGALRI
        LI  DGR+  +  P+KV  ++L++P   IC SD       +  +S    L+ G  YF LP  +    L    +A+    A++       ++R   G  R 
Subjt:  LIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHFFHSVLSFLTVASFFSSAAAVSRRPFDILRAPSGALRI

Query:  RLSDEFIS
        +  +  +S
Subjt:  RLSDEFIS

AT5G12340.1 unknown protein1.2e-1433.53Show/hide
Query:  DLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHFFHSVLSFLTVASFFSS--------------AAAVSRRPFDILRAPSGALRIRLSD
        +++ +FP   +C +DSF IGR+IP L+   +L PG  YF+LP   F   +   +  S F+S               A  S  PF+  + P+G + I++S 
Subjt:  DLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSHFFHSVLSFLTVASFFSS--------------AAAVSRRPFDILRAPSGALRIRLSD

Query:  EFISALLEQGSPSFETHK----KQSKICTTPQLAKDYTQLATRRQ--WKPKLDTIRERKKKKS-IRF
        EFI +L+ +     E       + S IC +P+L K Y QL   R+  W P L TI E K + S +RF
Subjt:  EFISALLEQGSPSFETHK----KQSKICTTPQLAKDYTQLATRRQ--WKPKLDTIRERKKKKS-IRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGATCAAAATGCTTCAACATTTCCCAATCCCAAACATGATTTCTTGGTCCTTATCCTGTTTTCATCTCCTTAACAACAACAACACAATCATTCCCAACAACAT
CAACAAGAACAAGAACAAGAACAAGAACATCAACCTAATCCATTCAGATGGTCGTGTCACAATCTACAACCAACCCATCAAAGTTTCCGACTTGATTCTTCAATTCCCCA
AACACCAAATTTGCCGGTCGGACTCCTTCACAATCGGCCGGAAAATCCCACAACTTTCCGGCCACCACCACCTGAAACCCGGCCACAATTACTTTCTTCTCCCATCTCAT
TTCTTCCACTCTGTTCTCTCTTTTCTCACCGTCGCCTCTTTCTTCTCCTCCGCCGCCGCCGTGTCTCGCCGGCCGTTCGACATTCTACGTGCCCCTTCCGGCGCCCTCCG
AATCCGCCTCTCCGACGAGTTCATCTCTGCTTTACTCGAACAGGGCAGCCCCAGTTTCGAAACCCATAAGAAACAGAGCAAAATCTGTACAACGCCGCAATTGGCTAAGG
ATTACACGCAGCTTGCAACTCGCCGGCAATGGAAGCCGAAGCTGGATACGATCCGGGAGCGGAAGAAGAAGAAATCGATTCGGTTTGTTTATAAGGCTAAGAATCGAATC
AGATTGAGGGTTTGA
mRNA sequenceShow/hide mRNA sequence
CTTTCTTTAACAGCTAAGAACATATCCCCAAAGTTGTCCTATTACTTTCTCCCTCTTCAACATTCAAAAGAGAGAGAAACCAAACAAAAAGTTTTATTTTACCCCCCACC
CCATCTCTTCCTATTTTTAAATCCCAAACCAAAACCCAATTTCAAAATCAAAATCAAAATCAAAATCTTCCCATGAGACATGAAAATGATCAAAATGCTTCAACATTTCC
CAATCCCAAACATGATTTCTTGGTCCTTATCCTGTTTTCATCTCCTTAACAACAACAACACAATCATTCCCAACAACATCAACAAGAACAAGAACAAGAACAAGAACATC
AACCTAATCCATTCAGATGGTCGTGTCACAATCTACAACCAACCCATCAAAGTTTCCGACTTGATTCTTCAATTCCCCAAACACCAAATTTGCCGGTCGGACTCCTTCAC
AATCGGCCGGAAAATCCCACAACTTTCCGGCCACCACCACCTGAAACCCGGCCACAATTACTTTCTTCTCCCATCTCATTTCTTCCACTCTGTTCTCTCTTTTCTCACCG
TCGCCTCTTTCTTCTCCTCCGCCGCCGCCGTGTCTCGCCGGCCGTTCGACATTCTACGTGCCCCTTCCGGCGCCCTCCGAATCCGCCTCTCCGACGAGTTCATCTCTGCT
TTACTCGAACAGGGCAGCCCCAGTTTCGAAACCCATAAGAAACAGAGCAAAATCTGTACAACGCCGCAATTGGCTAAGGATTACACGCAGCTTGCAACTCGCCGGCAATG
GAAGCCGAAGCTGGATACGATCCGGGAGCGGAAGAAGAAGAAATCGATTCGGTTTGTTTATAAGGCTAAGAATCGAATCAGATTGAGGGTTTGATTTGATTATATTGTTT
ACAACATTTGTATTATTAGAGATTTGTGTATAGTTTATATATATATATCTAAATATATATGATGTAACACGGCAATTTGAGGACTGGATTTTTCAGTTCTGTATACAGAG
TTTTGTTCTTTTGAGTTCTTGGG
Protein sequenceShow/hide protein sequence
MKMIKMLQHFPIPNMISWSLSCFHLLNNNNTIIPNNINKNKNKNKNINLIHSDGRVTIYNQPIKVSDLILQFPKHQICRSDSFTIGRKIPQLSGHHHLKPGHNYFLLPSH
FFHSVLSFLTVASFFSSAAAVSRRPFDILRAPSGALRIRLSDEFISALLEQGSPSFETHKKQSKICTTPQLAKDYTQLATRRQWKPKLDTIRERKKKKSIRFVYKAKNRI
RLRV