; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013478 (gene) of Chayote v1 genome

Gene IDSed0013478
OrganismSechium edule (Chayote v1)
DescriptionGlutamate-gated kainate-type ion channel receptor subunit GluR5
Genome locationLG10:37291259..37291585
RNA-Seq ExpressionSed0013478
SyntenySed0013478
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646070.1 hypothetical protein Csa_015561 [Cucumis sativus]2.1e-1466.67Show/hide
Query:  MLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNG
        ML     RFIL L LVLAL S S+ A+R+P  YWEQM+PKK+PSPSS PSKGTN+V  SSSK MKV+GNLP K+G
Subjt:  MLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNG

KAF4402307.1 hypothetical protein G4B88_003228 [Cannabis sativa]2.2e-1154.44Show/hide
Query:  SNSKFQIIHHPLFIMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNGK
        SNS   +I +    ML   + ++ L+ IL++A     S+ASRLP+EY++QMMPKK+PSPSS+PSKGTNSVT+SSSK +K D NLP  +GK
Subjt:  SNSKFQIIHHPLFIMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNGK

KAG6607702.1 hypothetical protein SDJN03_01044, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1654.81Show/hide
Query:  MPSHKAPSSLSHFNTKISNSKFQIIHHPLFIMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGN
        +PS   P S   +NT I             + L+F + RFI +L+LVLALAS SS+A+R+P +YWEQM+PKK+P+PSS PSKGTNSV SSS K +KVDGN
Subjt:  MPSHKAPSSLSHFNTKISNSKFQIIHHPLFIMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGN

Query:  LPKK
        LP K
Subjt:  LPKK

KAG6624344.1 hypothetical protein CIPAW_16G019900 [Carya illinoinensis]6.4e-1165.15Show/hide
Query:  LVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNGK
        L+L+ +LA     S+ASRLP+EYWEQM+PKK+PSPSS+PSKGTNS TSSSS   K DG+LP  +GK
Subjt:  LVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNGK

TYK23265.1 glutamate-gated kainate-type ion channel receptor subunit GluR5 [Cucumis melo var. makuwa]9.5e-1567.11Show/hide
Query:  IMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNG
        ++LAF+  RFIL L L+LAL S SS A+R+P  YWEQM+PKK+PSPSS PSKGTN+V  SSSK MKV+GNLP K+G
Subjt:  IMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNG

TrEMBL top hitse value%identityAlignment
A0A5D3DI56 Glutamate-gated kainate-type ion channel receptor subunit GluR54.6e-1567.11Show/hide
Query:  IMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNG
        ++LAF+  RFIL L L+LAL S SS A+R+P  YWEQM+PKK+PSPSS PSKGTN+V  SSSK MKV+GNLP K+G
Subjt:  IMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNG

A0A7J6GWN4 Uncharacterized protein3.1e-1154.44Show/hide
Query:  SNSKFQIIHHPLFIMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNGK
        SNS   +I +    ML   + ++ L  IL++A     S+ASRLP+EY++QMMPKK+PSPSS+PSKGTNSVT+SSSK +K D NLP  +GK
Subjt:  SNSKFQIIHHPLFIMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNGK

A0A7J6I408 Uncharacterized protein1.1e-1154.44Show/hide
Query:  SNSKFQIIHHPLFIMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNGK
        SNS   +I +    ML   + ++ L+ IL++A     S+ASRLP+EY++QMMPKK+PSPSS+PSKGTNSVT+SSSK +K D NLP  +GK
Subjt:  SNSKFQIIHHPLFIMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNGK

A0A803PR73 Uncharacterized protein3.1e-1154.44Show/hide
Query:  SNSKFQIIHHPLFIMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNGK
        SNS   +I +    ML   + ++ L  IL++A     S+ASRLP+EY++QMMPKK+PSPSS+PSKGTNSVT+SSSK +K D NLP  +GK
Subjt:  SNSKFQIIHHPLFIMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNGK

A0A803PS58 Uncharacterized protein2.0e-1053.33Show/hide
Query:  SNSKFQIIHHPLFIMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNGK
        SNS   +I +    ML   + ++ L  IL++A     S+ASRLP+EY++QMMPKK+PSPSS+PSKGTNSVT+ SSK +K D NLP  +GK
Subjt:  SNSKFQIIHHPLFIMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTCTCATAAAGCTCCCTCTTCCCTTTCACATTTCAACACCAAAATATCAAATTCCAAATTCCAAATTATTCACCACCCTCTATTCATCATGCTAGCTTTTTCCAA
GCTTAGATTCATTCTTGTCTTAATACTTGTTCTTGCTCTTGCCTCCGCGTCCTCAAAGGCATCAAGGTTGCCGAGGGAGTATTGGGAGCAGATGATGCCGAAGAAGATAC
CATCTCCATCCTCGACACCATCGAAAGGGACGAACTCCGTCACTTCTTCGTCTTCCAAAGGTATGAAAGTTGATGGGAATCTGCCCAAGAAGAATGGGAAGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCTCTCATAAAGCTCCCTCTTCCCTTTCACATTTCAACACCAAAATATCAAATTCCAAATTCCAAATTATTCACCACCCTCTATTCATCATGCTAGCTTTTTCCAA
GCTTAGATTCATTCTTGTCTTAATACTTGTTCTTGCTCTTGCCTCCGCGTCCTCAAAGGCATCAAGGTTGCCGAGGGAGTATTGGGAGCAGATGATGCCGAAGAAGATAC
CATCTCCATCCTCGACACCATCGAAAGGGACGAACTCCGTCACTTCTTCGTCTTCCAAAGGTATGAAAGTTGATGGGAATCTGCCCAAGAAGAATGGGAAGGCTTAG
Protein sequenceShow/hide protein sequence
MPSHKAPSSLSHFNTKISNSKFQIIHHPLFIMLAFSKLRFILVLILVLALASASSKASRLPREYWEQMMPKKIPSPSSTPSKGTNSVTSSSSKGMKVDGNLPKKNGKA