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Sed0013481 (gene) of Chayote v1 genome

Gene IDSed0013481
OrganismSechium edule (Chayote v1)
Descriptionthionin-like protein 2
Genome locationLG07:33828493..33830016
RNA-Seq ExpressionSed0013481
SyntenySed0013481
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575553.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]5.6e-2148.67Show/hide
Query:  VVIFCLVVSLVVGKSSAGSTPPLPY--NLECYIGCTLPCFEGPFTCAICLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDKEKKMQGC
        V++ CLV+S VV     G + P  Y     CY GC   CFE  F CAIC+G+C++   ++PM  NH +N  FC LGC+TS C K+L  NHP+ EK+M+GC
Subjt:  VVIFCLVVSLVVGKSSAGSTPPLPY--NLECYIGCTLPCFEGPFTCAICLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDKEKKMQGC

Query:  VNSCAQTCINAVN
        VNSC+ TC N +N
Subjt:  VNSCAQTCINAVN

KAG6575558.1 hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sororia]6.8e-1954.22Show/hide
Query:  CYIGCTLPCFEGPFTCAICLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDKEKKMQGCVNSCAQTCINAVN
        CY GC   CFE  F CAIC+G+C++   ++PM  NH +N  FC LGC+TS C K+L  NHP+ EK+M+GCVNSC+ TC N +N
Subjt:  CYIGCTLPCFEGPFTCAICLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDKEKKMQGCVNSCAQTCINAVN

KAG7014098.1 Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma]4.6e-1546.61Show/hide
Query:  MKSFVVIFCLVVSLVVGKSSAGSTPPLPYNLECYIGCTLPCFEGP----FTC-AICLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDK
        MKS VVI C ++SL+ G+S+A          +CY  C + C   P     TC A CL +C+  ++A PM  NH N + FC LGCATS+CTK  T N P  
Subjt:  MKSFVVIFCLVVSLVVGKSSAGSTPPLPYNLECYIGCTLPCFEGP----FTC-AICLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDK

Query:  EKKMQGCVNSCAQTCINA
        EKK++ CV+SCA TCI A
Subjt:  EKKMQGCVNSCAQTCINA

KAG7014099.1 hypothetical protein SDJN02_24272, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-2047.79Show/hide
Query:  VVIFCLVVSLVVGKSSAGSTPPLPY--NLECYIGCTLPCFEGPFTCAICLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDKEKKMQGC
        V++ CLV+S VV     G + P  Y     CY GC   C E  F CAIC+G+C++   ++PM  NH +N  FC LGC+TS C K+L  NHP+ EK+M+GC
Subjt:  VVIFCLVVSLVVGKSSAGSTPPLPY--NLECYIGCTLPCFEGPFTCAICLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDKEKKMQGC

Query:  VNSCAQTCINAVN
        VNSC+ TC N +N
Subjt:  VNSCAQTCINAVN

XP_038899787.1 thionin-like protein 2 [Benincasa hispida]3.5e-1546.61Show/hide
Query:  MKSFVVIFCLVVSLVVGKSSAGSTPPLPYNLECYIGCTLPCFEGP----FTC-AICLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDK
        MKS V++ C ++SLVVG+S+A          +CY  C + C   P     TC A CLG+C L   +SP+  NH + + FC LGCATS+CTK  T   P  
Subjt:  MKSFVVIFCLVVSLVVGKSSAGSTPPLPYNLECYIGCTLPCFEGP----FTC-AICLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDK

Query:  EKKMQGCVNSCAQTCINA
        EKK++ CVNSC QTCI A
Subjt:  EKKMQGCVNSCAQTCINA

TrEMBL top hitse value%identityAlignment
A0A061GI20 To encode a PR protein, Belongs to the plant thionin family with the following members:, putative9.6e-1139.64Show/hide
Query:  VVIFCLVVSLVVGKSSAGSTPPLPYNLECYIGCTLPCFEGP----FTCAI-CLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDKEKKM
        V++ CLV+ L+VG+S+A          +CY GC L C   P    F+CAI CL EC++ S+      + ++   FC LGCATS+CT + +  +P  E+K+
Subjt:  VVIFCLVVSLVVGKSSAGSTPPLPYNLECYIGCTLPCFEGP----FTCAI-CLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDKEKKM

Query:  QGCVNSCAQTC
          CV+SC++TC
Subjt:  QGCVNSCAQTC

A0A1S3CDB8 beta-hordothionin-like9.3e-1439.84Show/hide
Query:  MKSFVVIFCLVVS-LVVGKS---------SAGSTPPLPYNLECYIGCTL-PCFEGPFTCAICLGECVLKSTASPMA--MNHRNNYSFCNLGCATSICTKI
        MKS + + CL++S LVVGKS         S         +  CYI C L  C +G F CA+CLG+C +    S  +   N  +N+ FC +GC TS+CTK 
Subjt:  MKSFVVIFCLVVS-LVVGKS---------SAGSTPPLPYNLECYIGCTL-PCFEGPFTCAICLGECVLKSTASPMA--MNHRNNYSFCNLGCATSICTKI

Query:  -LTNNHPDKEKKMQGCVNSCAQTCINAV
         L NN    EK+++GCV+SC+Q C +++
Subjt:  -LTNNHPDKEKKMQGCVNSCAQTCINAV

A0A5E4GD16 PREDICTED: thionin7.3e-1141.96Show/hide
Query:  VIFCLVVSLVVGKSSAGSTPPLPYNLECYIGCTLPCF---EGPFTCAI-CLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDKEKKMQG
        V+ CLV+ LV+G+S+A       + L CY  C   C      P  C I CL +C+L  T  P   +  N+  FC LGCATS+CT I T ++P+ E+K++ 
Subjt:  VIFCLVVSLVVGKSSAGSTPPLPYNLECYIGCTLPCF---EGPFTCAI-CLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDKEKKMQG

Query:  CVNSCAQTCINA
        CV+SC+ TC NA
Subjt:  CVNSCAQTCINA

A0A6J1KDK0 thionin-like protein 21.2e-1342.37Show/hide
Query:  MKSFVVIFCLVVSLVVGKSSAGSTPPLPYNLECYIGCTLPCFEGP----FTC-AICLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDK
        MKS VV+ C ++SLV G+S+A          +CY  C + C   P     TC   CL +C+  ++A P  +NH + + FC LGCATS+CTK  T   P  
Subjt:  MKSFVVIFCLVVSLVVGKSSAGSTPPLPYNLECYIGCTLPCFEGP----FTC-AICLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDK

Query:  EKKMQGCVNSCAQTCINA
        EKK++ CVNSC++TC+ A
Subjt:  EKKMQGCVNSCAQTCINA

M5XBV6 Uncharacterized protein7.3e-1141.96Show/hide
Query:  VIFCLVVSLVVGKSSAGSTPPLPYNLECYIGCTLPCF---EGPFTCAI-CLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDKEKKMQG
        V+ CLV+ LV+G+S+A       + L CY  C   C      P  C I CL +C+L  T  P   +  N+  FC LGCATS+CT I T ++P+ E+K++ 
Subjt:  VIFCLVVSLVVGKSSAGSTPPLPYNLECYIGCTLPCF---EGPFTCAI-CLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDKEKKMQG

Query:  CVNSCAQTCINA
        CV+SC+ TC NA
Subjt:  CVNSCAQTCINA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCCTTTGTGGTTATATTTTGCTTGGTTGTGAGCTTAGTAGTAGGCAAGTCGAGTGCAGGCTCGACTCCGCCCCTTCCCTATAATTTAGAATGCTATATTGGGTG
CACCTTGCCCTGTTTTGAGGGTCCCTTCACGTGTGCTATTTGCTTGGGAGAATGTGTTTTAAAAAGTACTGCCTCTCCGATGGCTATGAACCACAGAAACAATTATTCCT
TTTGCAACCTTGGTTGTGCCACTTCTATATGCACCAAGATTCTCACCAACAATCACCCAGATAAAGAGAAGAAAATGCAAGGTTGTGTGAACTCGTGCGCTCAAACCTGC
ATAAATGCTGTGAACTAA
mRNA sequenceShow/hide mRNA sequence
AGAAAACAAAAAAATAGAGTTGGGAAAAGAGAGAAGAGAAAATGAAGTCCTTTGTGGTTATATTTTGCTTGGTTGTGAGCTTAGTAGTAGGCAAGTCGAGTGCAGGCTCG
ACTCCGCCCCTTCCCTATAATTTAGAATGCTATATTGGGTGCACCTTGCCCTGTTTTGAGGGTCCCTTCACGTGTGCTATTTGCTTGGGAGAATGTGTTTTAAAAAGTAC
TGCCTCTCCGATGGCTATGAACCACAGAAACAATTATTCCTTTTGCAACCTTGGTTGTGCCACTTCTATATGCACCAAGATTCTCACCAACAATCACCCAGATAAAGAGA
AGAAAATGCAAGGTTGTGTGAACTCGTGCGCTCAAACCTGCATAAATGCTGTGAACTAATAAAGAGAAGACATGGCAAATACTTGGGATTTGGCTTTAAAATACTATGAA
TAAATAAATAGCCAGTATTGGTTGAAACAAAATCATTTGGCTATCGATCGATCCCAAATAAATAAGTTAAGGGCGTGTACTTAAATCTAAATTTCTATTTCAAGCATCTA
TCAATTTGTAAAATATTTGGGTTGCTCTAAT
Protein sequenceShow/hide protein sequence
MKSFVVIFCLVVSLVVGKSSAGSTPPLPYNLECYIGCTLPCFEGPFTCAICLGECVLKSTASPMAMNHRNNYSFCNLGCATSICTKILTNNHPDKEKKMQGCVNSCAQTC
INAVN