CuGenDBv2

Gene ID	Sed0013504
Organism	Sechium edule (Chayote v1)
Description	Ty3/gypsy retrotransposon protein
Genome location	LG02:30320364..30323249
RNA-Seq Expression	Sed0013504
Synteny	Sed0013504
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

TYJ96663.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

58.38

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Query:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK
        M F  +   + LKG+P+L RAE SLK L KTW   D+G+L++    +    +        +  EE LP  + LL ++  +F+ P  LPPKR +DH+I   
Subjt:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK

Query:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY
          QK + VRPYKY H QK EIEK++ EMLQ+GIIRP HSPFSSPVLLV+KKDGGWRFCVDYR LN+ TI  KFPIPVIEELLDELHG+ V++KLDLKSGY
Subjt:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY

Query:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR
        HQI+M+EEDI KTAFRTH+G YEF+VMPFGLTNA ATFQSLMN VF+ +LR+ VLVFFDDILVYS ++  HE+HL  VF+TL+++ L+AN KKCVFA  +
Subjt:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR

Query:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF
          YLGH +S  GV+AD +K+ +ML WP PK +  LRGFLGLTGYYRRFV+ YG +AAPLT LL+K+AF+W+++ + AF+ LK AM T+PVLALPD+SLPF
Subjt:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF

Query:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY
        ++ETDASG+GLG VLSQN  PIAFFSQ+LS  A+ KSIYERELMA+VL+VQ+WRHYLLGR+F I +DQ+AL++L EQ E+QP++Q+W+TKLLGYDF+I Y
Subjt:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY

Query:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS
         P L+NKAADALSR+    EL  LS   ++D+  +  EV  DE L+ +I  L+ +P    K+ L N  L+YKGR+V+S +SS+IP++LHT+HDS++GGHS
Subjt:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS

Query:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------
        GFL TYKR++GELFWKGMK  ++KYV + E+CQRNK+EA  PAG+LQPL IP RI ED +MDF+EGLPK+ G N I+VVVDRLS                
Subjt:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------

Query:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT
                                                T LKRST FHPQTDGQTE VN CLE YLRCFC+E PN+W++++ W E WYNT +H S  T
Subjt:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT

Query:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP
        T FQ VYGR P PLISYG+ +T ND VE  L ERDLA++AL E L +AQ RMK++AD  RRE+ +  G+ VYLKLRPYRQRSLAR R EKLAPK++GPY 
Subjt:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP

Query:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG
        ITE IG+VAYRL LPP +SIH+VFH+SQLK  +G QH VQ     +T +FE    PE VLG
Subjt:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG

TYK03842.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

58.27

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Query:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK
        M F  +   + LKG+P+L RAE SLK L KTW   D+G+L++    +    +        +  EE LP  + LL ++  +F+ P  LPPKR +DH+I   
Subjt:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK

Query:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY
          QK + VRPYKY H QK EIEK++ EMLQ+GIIRP HSPFSSPVLLV+KKDGGWRFCVDYR LN+ TI  KFPIPVIEELLDELHG+ V++KLDLKSGY
Subjt:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY

Query:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR
        HQI+M+EEDI KTAFRTH+G YEF+VMPFGLTNA ATFQSLMN VF+ +LR+ VLVFFDDILVYS ++  HE+HL  VF+TL+++ L+AN KKCVFA  +
Subjt:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR

Query:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF
          YLGH +S  GV+AD +K+ +ML WP PK +  LRGFLGLTGYYRRFV+ YG +AAPLT LL+K+AF+W+++ + AF+ LK AM T+PVLALPD+SLPF
Subjt:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF

Query:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY
        ++ETDASG+GLG VLSQN  PIAFFSQ+LS  A+ KSIYERELMA+VL+VQ+WRHYLLGR+F I +DQ+AL++L EQ E+QP++Q+W+TKLLGYDF+I Y
Subjt:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY

Query:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS
         P L+NKAADALSR+    EL  LS   ++D+  +  EV  DE L+ +I  L+ +P    K+ L N  L+YKGR+V+S +SS+IP++LHT+HDS++GGHS
Subjt:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS

Query:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------
        GFL TYKR++GELFWKGMK  ++KYV + E+CQRNK+EA  PAG+LQPL IP RI ED +MDF+EGLPK+ G N I+VVVDRLS                
Subjt:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------

Query:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT
                                                T LKRST FHPQTDGQTE +N CLE YLRCFC+E PN+W++++ W E WYNT +H S  T
Subjt:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT

Query:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP
        T FQ VYGR P PLISYG+ +T ND VE  L ERDLA++AL E L +AQ RMK++AD  RRE+ +  G+ VYLKLRPYRQRSLAR R EKLAPK++GPY 
Subjt:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP

Query:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG
        ITE IG+VAYRL LPP +SIH+VFH+SQLK  +G QH VQ     +T +FE    PE VLG
Subjt:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG

TYK27058.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

58.38

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Query:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK
        M F  +   + LKG+P+L RAE SLK L KTW   D+G+L++    +    +        +  EE LP  + LL ++  +F+ P  LPPKR +DH+I   
Subjt:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK

Query:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY
          QK + VRPYKY H QK EIEK++ EMLQ+GIIRP HSPFSSPVLLV+KKDGGWRFCVDYR LN+ TI  KFPIPVIEELLDELHG+ V++KLDLKSGY
Subjt:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY

Query:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR
        HQI+M+EEDI KTAFRTH+G YEF+VMPFGLTNA ATFQSLMN VF+ +LR+ VLVFFDDILVYS ++  HE+HL  VF+TL+++ L+AN KKCVFA  +
Subjt:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR

Query:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF
          YLGH +S  GV+AD +K+ +ML WP PK +  LRGFLGLTGYYRRFV+ YG +AAPLT LL+K+AF+W+++ + AF+ LK AM T+PVLALPD+SLPF
Subjt:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF

Query:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY
        ++ETDASG+GLG VLSQN  PIAFFSQ+LS  A+ KSIYERELMA+VL+VQ+WRHYLLGR+F I +DQ+AL++L EQ E+QP++Q+W+TKLLGYDF+I Y
Subjt:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY

Query:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS
         P L+NKAADALSR+    EL  LS   ++D+  +  EV  DE L+ +I  L+ +P    K+ L N  L+YKGR+V+S +SS+IP++LHT+HDS++GGHS
Subjt:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS

Query:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------
        GFL TYKR++GELFWKGMK  ++KYV + E+CQRNK+EA  PAG+LQPL IP RI ED +MDF+EGLPK+ G N I+VVVDRLS                
Subjt:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------

Query:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT
                                                T LKRST FHPQTDGQTE VN CLE YLRCFC+E PN+W++++ W E WYNT +H S  T
Subjt:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT

Query:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP
        T FQ VYGR P PLISYG+ +T ND VE  L ERDLA++AL E L +AQ RMK++AD  RRE+ +  G+ VYLKLRPYRQRSLAR R EKLAPK++GPY 
Subjt:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP

Query:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG
        ITE IG+VAYRL LPP +SIH+VFH+SQLK  +G QH VQ     +T +FE    PE VLG
Subjt:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG

TYK27963.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

58.38

Show/hide

Query:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK
        M F  +   + LKG+P+L RAE SLK L KTW   D+G+L++    +    +        +  EE LP  + LL ++  +F+ P  LPPKR +DH+I   
Subjt:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK

Query:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY
          QK + VRPYKY H QK EIEK++ EMLQ+GIIRP HSPFSSPVLLV+KKDGGWRFCVDYR LN+ TI  KFPIPVIEELLDELHG+ V++KLDLKSGY
Subjt:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY

Query:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR
        HQI+M+EEDI KTAFRTH+G YEF+VMPFGLTNA ATFQSLMN VF+ +LR+ VLVFFDDILVYS ++  HE+HL  VF+TL+++ L+AN KKCVFA  +
Subjt:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR

Query:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF
          YLGH +S  GV+AD +K+ +ML WP PK +  LRGFLGLTGYYRRFV+ YG +AAPLT LL+K+AF+W+++ + AF+ LK AM T+PVLALPD+SLPF
Subjt:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF

Query:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY
        ++ETDASG+GLG VLSQN  PIAFFSQ+LS  A+ KSIYERELMA+VL+VQ+WRHYLLGR+F I +DQ+AL++L EQ E+QP++Q+W+TKLLGYDF+I Y
Subjt:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY

Query:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS
         P L+NKAADALSR+    EL  LS   ++D+  +  EV  DE L+ +I  L+ +P    K+ L N  L+YKGR+V+S +SS+IP++LHT+HDS++GGHS
Subjt:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS

Query:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------
        GFL TYKR++GELFWKGMK  ++KYV + E+CQRNK+EA  PAG+LQPL IP RI ED +MDF+EGLPK+ G N I+VVVDRLS                
Subjt:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------

Query:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT
                                                T LKRST FHPQTDGQTE VN CLE YLRCFC+E PN+W++++ W E WYNT +H S  T
Subjt:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT

Query:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP
        T FQ VYGR P PLISYG+ +T ND VE  L ERDLA++AL E L +AQ RMK++AD  RRE+ +  G+ VYLKLRPYRQRSLAR R EKLAPK++GPY 
Subjt:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP

Query:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG
        ITE IG+VAYRL LPP +SIH+VFH+SQLK  +G QH VQ     +T +FE    PE VLG
Subjt:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG

TYK28944.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

58.38

Show/hide

Query:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK
        M F  +   + LKG+P+L RAE SLK L KTW   D+G+L++    +    +        +  EE LP  + LL ++  +F+ P  LPPKR +DH+I   
Subjt:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK

Query:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY
          QK + VRPYKY H QK EIEK++ EMLQ+GIIRP HSPFSSPVLLV+KKDGGWRFCVDYR LN+ TI  KFPIPVIEELLDELHG+ V++KLDLKSGY
Subjt:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY

Query:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR
        HQI+M+EEDI KTAFRTH+G YEF+VMPFGLTNA ATFQSLMN VF+ +LR+ VLVFFDDILVYS ++  HE+HL  VF+TL+++ L+AN KKCVFA  +
Subjt:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR

Query:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF
          YLGH +S  GV+AD +K+ +ML WP PK +  LRGFLGLTGYYRRFV+ YG +AAPLT LL+K+AF+W+++ + AF+ LK AM T+PVLALPD+SLPF
Subjt:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF

Query:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY
        ++ETDASG+GLG VLSQN  PIAFFSQ+LS  A+ KSIYERELMA+VL+VQ+WRHYLLGR+F I +DQ+AL++L EQ E+QP++Q+W+TKLLGYDF+I Y
Subjt:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY

Query:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS
         P L+NKAADALSR+    EL  LS   ++D+  +  EV  DE L+ +I  L+ +P    K+ L N  L+YKGR+V+S +SS+IP++LHT+HDS++GGHS
Subjt:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS

Query:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------
        GFL TYKR++GELFWKGMK  ++KYV + E+CQRNK+EA  PAG+LQPL IP RI ED +MDF+EGLPK+ G N I+VVVDRLS                
Subjt:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------

Query:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT
                                                T LKRST FHPQTDGQTE VN CLE YLRCFC+E PN+W++++ W E WYNT +H S  T
Subjt:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT

Query:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP
        T FQ VYGR P PLISYG+ +T ND VE  L ERDLA++AL E L +AQ RMK++AD  RRE+ +  G+ VYLKLRPYRQRSLAR R EKLAPK++GPY 
Subjt:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP

Query:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG
        ITE IG+VAYRL LPP +SIH+VFH+SQLK  +G QH VQ     +T +FE    PE VLG
Subjt:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG

TrEMBL top hits

e value

%identity

Alignment

A0A5D3BBH7 Ty3/gypsy retrotransposon protein

0.0e+00

58.38

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Query:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK
        M F  +   + LKG+P+L RAE SLK L KTW   D+G+L++    +    +        +  EE LP  + LL ++  +F+ P  LPPKR +DH+I   
Subjt:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK

Query:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY
          QK + VRPYKY H QK EIEK++ EMLQ+GIIRP HSPFSSPVLLV+KKDGGWRFCVDYR LN+ TI  KFPIPVIEELLDELHG+ V++KLDLKSGY
Subjt:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY

Query:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR
        HQI+M+EEDI KTAFRTH+G YEF+VMPFGLTNA ATFQSLMN VF+ +LR+ VLVFFDDILVYS ++  HE+HL  VF+TL+++ L+AN KKCVFA  +
Subjt:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR

Query:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF
          YLGH +S  GV+AD +K+ +ML WP PK +  LRGFLGLTGYYRRFV+ YG +AAPLT LL+K+AF+W+++ + AF+ LK AM T+PVLALPD+SLPF
Subjt:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF

Query:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY
        ++ETDASG+GLG VLSQN  PIAFFSQ+LS  A+ KSIYERELMA+VL+VQ+WRHYLLGR+F I +DQ+AL++L EQ E+QP++Q+W+TKLLGYDF+I Y
Subjt:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY

Query:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS
         P L+NKAADALSR+    EL  LS   ++D+  +  EV  DE L+ +I  L+ +P    K+ L N  L+YKGR+V+S +SS+IP++LHT+HDS++GGHS
Subjt:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS

Query:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------
        GFL TYKR++GELFWKGMK  ++KYV + E+CQRNK+EA  PAG+LQPL IP RI ED +MDF+EGLPK+ G N I+VVVDRLS                
Subjt:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------

Query:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT
                                                T LKRST FHPQTDGQTE VN CLE YLRCFC+E PN+W++++ W E WYNT +H S  T
Subjt:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT

Query:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP
        T FQ VYGR P PLISYG+ +T ND VE  L ERDLA++AL E L +AQ RMK++AD  RRE+ +  G+ VYLKLRPYRQRSLAR R EKLAPK++GPY 
Subjt:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP

Query:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG
        ITE IG+VAYRL LPP +SIH+VFH+SQLK  +G QH VQ     +T +FE    PE VLG
Subjt:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG

A0A5D3BYA1 Ty3/gypsy retrotransposon protein

0.0e+00

58.27

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Query:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK
        M F  +   + LKG+P+L RAE SLK L KTW   D+G+L++    +    +        +  EE LP  + LL ++  +F+ P  LPPKR +DH+I   
Subjt:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK

Query:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY
          QK + VRPYKY H QK EIEK++ EMLQ+GIIRP HSPFSSPVLLV+KKDGGWRFCVDYR LN+ TI  KFPIPVIEELLDELHG+ V++KLDLKSGY
Subjt:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY

Query:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR
        HQI+M+EEDI KTAFRTH+G YEF+VMPFGLTNA ATFQSLMN VF+ +LR+ VLVFFDDILVYS ++  HE+HL  VF+TL+++ L+AN KKCVFA  +
Subjt:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR

Query:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF
          YLGH +S  GV+AD +K+ +ML WP PK +  LRGFLGLTGYYRRFV+ YG +AAPLT LL+K+AF+W+++ + AF+ LK AM T+PVLALPD+SLPF
Subjt:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF

Query:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY
        ++ETDASG+GLG VLSQN  PIAFFSQ+LS  A+ KSIYERELMA+VL+VQ+WRHYLLGR+F I +DQ+AL++L EQ E+QP++Q+W+TKLLGYDF+I Y
Subjt:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY

Query:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS
         P L+NKAADALSR+    EL  LS   ++D+  +  EV  DE L+ +I  L+ +P    K+ L N  L+YKGR+V+S +SS+IP++LHT+HDS++GGHS
Subjt:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS

Query:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------
        GFL TYKR++GELFWKGMK  ++KYV + E+CQRNK+EA  PAG+LQPL IP RI ED +MDF+EGLPK+ G N I+VVVDRLS                
Subjt:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------

Query:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT
                                                T LKRST FHPQTDGQTE +N CLE YLRCFC+E PN+W++++ W E WYNT +H S  T
Subjt:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT

Query:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP
        T FQ VYGR P PLISYG+ +T ND VE  L ERDLA++AL E L +AQ RMK++AD  RRE+ +  G+ VYLKLRPYRQRSLAR R EKLAPK++GPY 
Subjt:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP

Query:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG
        ITE IG+VAYRL LPP +SIH+VFH+SQLK  +G QH VQ     +T +FE    PE VLG
Subjt:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG

A0A5D3DU86 Ty3/gypsy retrotransposon protein

0.0e+00

58.38

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Query:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK
        M F  +   + LKG+P+L RAE SLK L KTW   D+G+L++    +    +        +  EE LP  + LL ++  +F+ P  LPPKR +DH+I   
Subjt:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK

Query:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY
          QK + VRPYKY H QK EIEK++ EMLQ+GIIRP HSPFSSPVLLV+KKDGGWRFCVDYR LN+ TI  KFPIPVIEELLDELHG+ V++KLDLKSGY
Subjt:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY

Query:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR
        HQI+M+EEDI KTAFRTH+G YEF+VMPFGLTNA ATFQSLMN VF+ +LR+ VLVFFDDILVYS ++  HE+HL  VF+TL+++ L+AN KKCVFA  +
Subjt:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR

Query:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF
          YLGH +S  GV+AD +K+ +ML WP PK +  LRGFLGLTGYYRRFV+ YG +AAPLT LL+K+AF+W+++ + AF+ LK AM T+PVLALPD+SLPF
Subjt:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF

Query:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY
        ++ETDASG+GLG VLSQN  PIAFFSQ+LS  A+ KSIYERELMA+VL+VQ+WRHYLLGR+F I +DQ+AL++L EQ E+QP++Q+W+TKLLGYDF+I Y
Subjt:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY

Query:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS
         P L+NKAADALSR+    EL  LS   ++D+  +  EV  DE L+ +I  L+ +P    K+ L N  L+YKGR+V+S +SS+IP++LHT+HDS++GGHS
Subjt:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS

Query:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------
        GFL TYKR++GELFWKGMK  ++KYV + E+CQRNK+EA  PAG+LQPL IP RI ED +MDF+EGLPK+ G N I+VVVDRLS                
Subjt:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------

Query:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT
                                                T LKRST FHPQTDGQTE VN CLE YLRCFC+E PN+W++++ W E WYNT +H S  T
Subjt:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT

Query:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP
        T FQ VYGR P PLISYG+ +T ND VE  L ERDLA++AL E L +AQ RMK++AD  RRE+ +  G+ VYLKLRPYRQRSLAR R EKLAPK++GPY 
Subjt:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP

Query:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG
        ITE IG+VAYRL LPP +SIH+VFH+SQLK  +G QH VQ     +T +FE    PE VLG
Subjt:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG

A0A5D3DWA9 Ty3/gypsy retrotransposon protein

0.0e+00

58.38

Show/hide

Query:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK
        M F  +   + LKG+P+L RAE SLK L KTW   D+G+L++    +    +        +  EE LP  + LL ++  +F+ P  LPPKR +DH+I   
Subjt:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK

Query:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY
          QK + VRPYKY H QK EIEK++ EMLQ+GIIRP HSPFSSPVLLV+KKDGGWRFCVDYR LN+ TI  KFPIPVIEELLDELHG+ V++KLDLKSGY
Subjt:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY

Query:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR
        HQI+M+EEDI KTAFRTH+G YEF+VMPFGLTNA ATFQSLMN VF+ +LR+ VLVFFDDILVYS ++  HE+HL  VF+TL+++ L+AN KKCVFA  +
Subjt:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR

Query:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF
          YLGH +S  GV+AD +K+ +ML WP PK +  LRGFLGLTGYYRRFV+ YG +AAPLT LL+K+AF+W+++ + AF+ LK AM T+PVLALPD+SLPF
Subjt:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF

Query:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY
        ++ETDASG+GLG VLSQN  PIAFFSQ+LS  A+ KSIYERELMA+VL+VQ+WRHYLLGR+F I +DQ+AL++L EQ E+QP++Q+W+TKLLGYDF+I Y
Subjt:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY

Query:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS
         P L+NKAADALSR+    EL  LS   ++D+  +  EV  DE L+ +I  L+ +P    K+ L N  L+YKGR+V+S +SS+IP++LHT+HDS++GGHS
Subjt:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS

Query:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------
        GFL TYKR++GELFWKGMK  ++KYV + E+CQRNK+EA  PAG+LQPL IP RI ED +MDF+EGLPK+ G N I+VVVDRLS                
Subjt:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------

Query:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT
                                                T LKRST FHPQTDGQTE VN CLE YLRCFC+E PN+W++++ W E WYNT +H S  T
Subjt:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT

Query:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP
        T FQ VYGR P PLISYG+ +T ND VE  L ERDLA++AL E L +AQ RMK++AD  RRE+ +  G+ VYLKLRPYRQRSLAR R EKLAPK++GPY 
Subjt:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP

Query:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG
        ITE IG+VAYRL LPP +SIH+VFH+SQLK  +G QH VQ     +T +FE    PE VLG
Subjt:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG

A0A5D3DZK6 Ty3/gypsy retrotransposon protein

0.0e+00

58.38

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Query:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK
        M F  +   + LKG+P+L RAE SLK L KTW   D+G+L++    +    +        +  EE LP  + LL ++  +F+ P  LPPKR +DH+I   
Subjt:  MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLK

Query:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY
          QK + VRPYKY H QK EIEK++ EMLQ+GIIRP HSPFSSPVLLV+KKDGGWRFCVDYR LN+ TI  KFPIPVIEELLDELHG+ V++KLDLKSGY
Subjt:  DEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGY

Query:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR
        HQI+M+EEDI KTAFRTH+G YEF+VMPFGLTNA ATFQSLMN VF+ +LR+ VLVFFDDILVYS ++  HE+HL  VF+TL+++ L+AN KKCVFA  +
Subjt:  HQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPR

Query:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF
          YLGH +S  GV+AD +K+ +ML WP PK +  LRGFLGLTGYYRRFV+ YG +AAPLT LL+K+AF+W+++ + AF+ LK AM T+PVLALPD+SLPF
Subjt:  CEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPF

Query:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY
        ++ETDASG+GLG VLSQN  PIAFFSQ+LS  A+ KSIYERELMA+VL+VQ+WRHYLLGR+F I +DQ+AL++L EQ E+QP++Q+W+TKLLGYDF+I Y
Subjt:  VVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEY

Query:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS
         P L+NKAADALSR+    EL  LS   ++D+  +  EV  DE L+ +I  L+ +P    K+ L N  L+YKGR+V+S +SS+IP++LHT+HDS++GGHS
Subjt:  NPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIIDALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHS

Query:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------
        GFL TYKR++GELFWKGMK  ++KYV + E+CQRNK+EA  PAG+LQPL IP RI ED +MDF+EGLPK+ G N I+VVVDRLS                
Subjt:  GFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVEGLPKSHGKNSILVVVDRLS----------------

Query:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT
                                                T LKRST FHPQTDGQTE VN CLE YLRCFC+E PN+W++++ W E WYNT +H S  T
Subjt:  ----------------------------------------TRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINT

Query:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP
        T FQ VYGR P PLISYG+ +T ND VE  L ERDLA++AL E L +AQ RMK++AD  RRE+ +  G+ VYLKLRPYRQRSLAR R EKLAPK++GPY 
Subjt:  TSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYP

Query:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG
        ITE IG+VAYRL LPP +SIH+VFH+SQLK  +G QH VQ     +T +FE    PE VLG
Subjt:  ITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQHQVQQNPMLITEDFEWVASPEEVLG

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.5e-119

31.6

Show/hide

Query:  PKREVDHQISLKDEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGS
        P + ++ ++ L  E   + +R Y     +   +   I + L+SGIIR   +  + PV+ V KK+G  R  VDY+ LN+   P+ +P+P+IE+LL ++ GS
Subjt:  PKREVDHQISLKDEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGS

Query:  KVYTKLDLKSGYHQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLF
         ++TKLDLKS YH I++++ D  K AFR  +G +E+LVMP+G++ A A FQ  +N +        V+ + DDIL++S +   H +H+  V   L+  +L 
Subjt:  KVYTKLDLKSGYHQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLF

Query:  ANLKKCVFAQPRCEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDA-FQWNDDTSKAFDGLKKAMVT
         N  KC F Q + +++G+ +S +G     E I+ +L W  PK  KELR FLG   Y R+F+     L  PL +LLKKD  ++W    ++A + +K+ +V+
Subjt:  ANLKKCVFAQPRCEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDA-FQWNDDTSKAFDGLKKAMVT

Query:  LPVLALPDFSLPFVVETDASGTGLGVVLSQNK-----RPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLG--RKFLIRTDQRAL--RYLTEQT
         PVL   DFS   ++ETDAS   +G VLSQ        P+ ++S ++S      S+ ++E++AI+ +++ WRHYL      F I TD R L  R   E  
Subjt:  LPVLALPDFSLPFVVETDASGTGLGVVLSQNK-----RPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLG--RKFLIRTDQRAL--RYLTEQT

Query:  EIQPEYQRWVTKLLGYDFDIEYNPRLENKAADALSR-------VPQLSELATLSVPNLIDVT-----QIDAEVRNDEYLRPIIDALREDPDSHPKFELRN
               RW   L  ++F+I Y P   N  ADALSR       +P+ SE  +++  N I +T     Q+  E  ND  L  +++   ED       +L++
Subjt:  EIQPEYQRWVTKLLGYDFDIEYNPRLENKAADALSR-------VPQLSELATLSVPNLIDVT-----QIDAEVRNDEYLRPIIDALREDPDSHPKFELRN

Query:  DKLL-YKGRMVVSATSSLIPTILHTYHDSVMGGHSGFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVE
          L+  K ++++   + L  TI+  YH+     H G       +     WKG++  +Q+YV     CQ NK+    P G LQP+    R WE +SMDF+ 
Subjt:  DKLL-YKGRMVVSATSSLIPTILHTYHDSVMGGHSGFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVE

Query:  GLPKSHGKNSILVVVDRLSTR--------------------------------------------------------LKRSTTFHPQTDGQTEFVNNCLE
         LP+S G N++ VVVDR S                                                          +K S  + PQTDGQTE  N  +E
Subjt:  GLPKSHGKNSILVVVDRLSTR--------------------------------------------------------LKRSTTFHPQTDGQTEFVNNCLE

Query:  IYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINTTSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREV-A
          LRC CS HPN W   ++ V+  YN   H +   T F++V+  +  P +S  E  + +D  ++   E       + E L+    +MK+Y D   +E+  
Subjt:  IYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINTTSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREV-A

Query:  YTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYPITECIGKVAYRLALPPN--SSIHDVFHVSQLKKCVGQQHQVQQNPMLITE
        +  G++V +K    R ++   H+  KLAP F GP+ + +  G   Y L LP +        FHVS L+K    +H  + N   I E
Subjt:  YTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYPITECIGKVAYRLALPPN--SSIHDVFHVSQLKKCVGQQHQVQQNPMLITE

P0CT35 Transposon Tf2-2 polyprotein

2.5e-119

31.6

Show/hide

Query:  PKREVDHQISLKDEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGS
        P + ++ ++ L  E   + +R Y     +   +   I + L+SGIIR   +  + PV+ V KK+G  R  VDY+ LN+   P+ +P+P+IE+LL ++ GS
Subjt:  PKREVDHQISLKDEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGS

Query:  KVYTKLDLKSGYHQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLF
         ++TKLDLKS YH I++++ D  K AFR  +G +E+LVMP+G++ A A FQ  +N +        V+ + DDIL++S +   H +H+  V   L+  +L 
Subjt:  KVYTKLDLKSGYHQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLF

Query:  ANLKKCVFAQPRCEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDA-FQWNDDTSKAFDGLKKAMVT
         N  KC F Q + +++G+ +S +G     E I+ +L W  PK  KELR FLG   Y R+F+     L  PL +LLKKD  ++W    ++A + +K+ +V+
Subjt:  ANLKKCVFAQPRCEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDA-FQWNDDTSKAFDGLKKAMVT

Query:  LPVLALPDFSLPFVVETDASGTGLGVVLSQNK-----RPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLG--RKFLIRTDQRAL--RYLTEQT
         PVL   DFS   ++ETDAS   +G VLSQ        P+ ++S ++S      S+ ++E++AI+ +++ WRHYL      F I TD R L  R   E  
Subjt:  LPVLALPDFSLPFVVETDASGTGLGVVLSQNK-----RPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLG--RKFLIRTDQRAL--RYLTEQT

Query:  EIQPEYQRWVTKLLGYDFDIEYNPRLENKAADALSR-------VPQLSELATLSVPNLIDVT-----QIDAEVRNDEYLRPIIDALREDPDSHPKFELRN
               RW   L  ++F+I Y P   N  ADALSR       +P+ SE  +++  N I +T     Q+  E  ND  L  +++   ED       +L++
Subjt:  EIQPEYQRWVTKLLGYDFDIEYNPRLENKAADALSR-------VPQLSELATLSVPNLIDVT-----QIDAEVRNDEYLRPIIDALREDPDSHPKFELRN

Query:  DKLL-YKGRMVVSATSSLIPTILHTYHDSVMGGHSGFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVE
          L+  K ++++   + L  TI+  YH+     H G       +     WKG++  +Q+YV     CQ NK+    P G LQP+    R WE +SMDF+ 
Subjt:  DKLL-YKGRMVVSATSSLIPTILHTYHDSVMGGHSGFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVE

Query:  GLPKSHGKNSILVVVDRLSTR--------------------------------------------------------LKRSTTFHPQTDGQTEFVNNCLE
         LP+S G N++ VVVDR S                                                          +K S  + PQTDGQTE  N  +E
Subjt:  GLPKSHGKNSILVVVDRLSTR--------------------------------------------------------LKRSTTFHPQTDGQTEFVNNCLE

Query:  IYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINTTSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREV-A
          LRC CS HPN W   ++ V+  YN   H +   T F++V+  +  P +S  E  + +D  ++   E       + E L+    +MK+Y D   +E+  
Subjt:  IYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINTTSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREV-A

Query:  YTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYPITECIGKVAYRLALPPN--SSIHDVFHVSQLKKCVGQQHQVQQNPMLITE
        +  G++V +K    R ++   H+  KLAP F GP+ + +  G   Y L LP +        FHVS L+K    +H  + N   I E
Subjt:  YTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYPITECIGKVAYRLALPPN--SSIHDVFHVSQLKKCVGQQHQVQQNPMLITE

P0CT36 Transposon Tf2-3 polyprotein

2.5e-119

31.6

Show/hide

Query:  PKREVDHQISLKDEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGS
        P + ++ ++ L  E   + +R Y     +   +   I + L+SGIIR   +  + PV+ V KK+G  R  VDY+ LN+   P+ +P+P+IE+LL ++ GS
Subjt:  PKREVDHQISLKDEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGS

Query:  KVYTKLDLKSGYHQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLF
         ++TKLDLKS YH I++++ D  K AFR  +G +E+LVMP+G++ A A FQ  +N +        V+ + DDIL++S +   H +H+  V   L+  +L 
Subjt:  KVYTKLDLKSGYHQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLF

Query:  ANLKKCVFAQPRCEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDA-FQWNDDTSKAFDGLKKAMVT
         N  KC F Q + +++G+ +S +G     E I+ +L W  PK  KELR FLG   Y R+F+     L  PL +LLKKD  ++W    ++A + +K+ +V+
Subjt:  ANLKKCVFAQPRCEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDA-FQWNDDTSKAFDGLKKAMVT

Query:  LPVLALPDFSLPFVVETDASGTGLGVVLSQNK-----RPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLG--RKFLIRTDQRAL--RYLTEQT
         PVL   DFS   ++ETDAS   +G VLSQ        P+ ++S ++S      S+ ++E++AI+ +++ WRHYL      F I TD R L  R   E  
Subjt:  LPVLALPDFSLPFVVETDASGTGLGVVLSQNK-----RPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLG--RKFLIRTDQRAL--RYLTEQT

Query:  EIQPEYQRWVTKLLGYDFDIEYNPRLENKAADALSR-------VPQLSELATLSVPNLIDVT-----QIDAEVRNDEYLRPIIDALREDPDSHPKFELRN
               RW   L  ++F+I Y P   N  ADALSR       +P+ SE  +++  N I +T     Q+  E  ND  L  +++   ED       +L++
Subjt:  EIQPEYQRWVTKLLGYDFDIEYNPRLENKAADALSR-------VPQLSELATLSVPNLIDVT-----QIDAEVRNDEYLRPIIDALREDPDSHPKFELRN

Query:  DKLL-YKGRMVVSATSSLIPTILHTYHDSVMGGHSGFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVE
          L+  K ++++   + L  TI+  YH+     H G       +     WKG++  +Q+YV     CQ NK+    P G LQP+    R WE +SMDF+ 
Subjt:  DKLL-YKGRMVVSATSSLIPTILHTYHDSVMGGHSGFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVE

Query:  GLPKSHGKNSILVVVDRLSTR--------------------------------------------------------LKRSTTFHPQTDGQTEFVNNCLE
         LP+S G N++ VVVDR S                                                          +K S  + PQTDGQTE  N  +E
Subjt:  GLPKSHGKNSILVVVDRLSTR--------------------------------------------------------LKRSTTFHPQTDGQTEFVNNCLE

Query:  IYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINTTSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREV-A
          LRC CS HPN W   ++ V+  YN   H +   T F++V+  +  P +S  E  + +D  ++   E       + E L+    +MK+Y D   +E+  
Subjt:  IYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINTTSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREV-A

Query:  YTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYPITECIGKVAYRLALPPN--SSIHDVFHVSQLKKCVGQQHQVQQNPMLITE
        +  G++V +K    R ++   H+  KLAP F GP+ + +  G   Y L LP +        FHVS L+K    +H  + N   I E
Subjt:  YTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYPITECIGKVAYRLALPPN--SSIHDVFHVSQLKKCVGQQHQVQQNPMLITE

P0CT37 Transposon Tf2-4 polyprotein

2.5e-119

31.6

Show/hide

Query:  PKREVDHQISLKDEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGS
        P + ++ ++ L  E   + +R Y     +   +   I + L+SGIIR   +  + PV+ V KK+G  R  VDY+ LN+   P+ +P+P+IE+LL ++ GS
Subjt:  PKREVDHQISLKDEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGS

Query:  KVYTKLDLKSGYHQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLF
         ++TKLDLKS YH I++++ D  K AFR  +G +E+LVMP+G++ A A FQ  +N +        V+ + DDIL++S +   H +H+  V   L+  +L 
Subjt:  KVYTKLDLKSGYHQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLF

Query:  ANLKKCVFAQPRCEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDA-FQWNDDTSKAFDGLKKAMVT
         N  KC F Q + +++G+ +S +G     E I+ +L W  PK  KELR FLG   Y R+F+     L  PL +LLKKD  ++W    ++A + +K+ +V+
Subjt:  ANLKKCVFAQPRCEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDA-FQWNDDTSKAFDGLKKAMVT

Query:  LPVLALPDFSLPFVVETDASGTGLGVVLSQNK-----RPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLG--RKFLIRTDQRAL--RYLTEQT
         PVL   DFS   ++ETDAS   +G VLSQ        P+ ++S ++S      S+ ++E++AI+ +++ WRHYL      F I TD R L  R   E  
Subjt:  LPVLALPDFSLPFVVETDASGTGLGVVLSQNK-----RPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLG--RKFLIRTDQRAL--RYLTEQT

Query:  EIQPEYQRWVTKLLGYDFDIEYNPRLENKAADALSR-------VPQLSELATLSVPNLIDVT-----QIDAEVRNDEYLRPIIDALREDPDSHPKFELRN
               RW   L  ++F+I Y P   N  ADALSR       +P+ SE  +++  N I +T     Q+  E  ND  L  +++   ED       +L++
Subjt:  EIQPEYQRWVTKLLGYDFDIEYNPRLENKAADALSR-------VPQLSELATLSVPNLIDVT-----QIDAEVRNDEYLRPIIDALREDPDSHPKFELRN

Query:  DKLL-YKGRMVVSATSSLIPTILHTYHDSVMGGHSGFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVE
          L+  K ++++   + L  TI+  YH+     H G       +     WKG++  +Q+YV     CQ NK+    P G LQP+    R WE +SMDF+ 
Subjt:  DKLL-YKGRMVVSATSSLIPTILHTYHDSVMGGHSGFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVE

Query:  GLPKSHGKNSILVVVDRLSTR--------------------------------------------------------LKRSTTFHPQTDGQTEFVNNCLE
         LP+S G N++ VVVDR S                                                          +K S  + PQTDGQTE  N  +E
Subjt:  GLPKSHGKNSILVVVDRLSTR--------------------------------------------------------LKRSTTFHPQTDGQTEFVNNCLE

Query:  IYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINTTSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREV-A
          LRC CS HPN W   ++ V+  YN   H +   T F++V+  +  P +S  E  + +D  ++   E       + E L+    +MK+Y D   +E+  
Subjt:  IYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINTTSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREV-A

Query:  YTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYPITECIGKVAYRLALPPN--SSIHDVFHVSQLKKCVGQQHQVQQNPMLITE
        +  G++V +K    R ++   H+  KLAP F GP+ + +  G   Y L LP +        FHVS L+K    +H  + N   I E
Subjt:  YTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYPITECIGKVAYRLALPPN--SSIHDVFHVSQLKKCVGQQHQVQQNPMLITE

P0CT41 Transposon Tf2-12 polyprotein

2.5e-119

31.6

Show/hide

Query:  PKREVDHQISLKDEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGS
        P + ++ ++ L  E   + +R Y     +   +   I + L+SGIIR   +  + PV+ V KK+G  R  VDY+ LN+   P+ +P+P+IE+LL ++ GS
Subjt:  PKREVDHQISLKDEQKTVQVRPYKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGS

Query:  KVYTKLDLKSGYHQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLF
         ++TKLDLKS YH I++++ D  K AFR  +G +E+LVMP+G++ A A FQ  +N +        V+ + DDIL++S +   H +H+  V   L+  +L 
Subjt:  KVYTKLDLKSGYHQIKMKEEDISKTAFRTHQGQYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLF

Query:  ANLKKCVFAQPRCEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDA-FQWNDDTSKAFDGLKKAMVT
         N  KC F Q + +++G+ +S +G     E I+ +L W  PK  KELR FLG   Y R+F+     L  PL +LLKKD  ++W    ++A + +K+ +V+
Subjt:  ANLKKCVFAQPRCEYLGHWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDA-FQWNDDTSKAFDGLKKAMVT

Query:  LPVLALPDFSLPFVVETDASGTGLGVVLSQNK-----RPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLG--RKFLIRTDQRAL--RYLTEQT
         PVL   DFS   ++ETDAS   +G VLSQ        P+ ++S ++S      S+ ++E++AI+ +++ WRHYL      F I TD R L  R   E  
Subjt:  LPVLALPDFSLPFVVETDASGTGLGVVLSQNK-----RPIAFFSQRLSNVARRKSIYERELMAIVLAVQRWRHYLLG--RKFLIRTDQRAL--RYLTEQT

Query:  EIQPEYQRWVTKLLGYDFDIEYNPRLENKAADALSR-------VPQLSELATLSVPNLIDVT-----QIDAEVRNDEYLRPIIDALREDPDSHPKFELRN
               RW   L  ++F+I Y P   N  ADALSR       +P+ SE  +++  N I +T     Q+  E  ND  L  +++   ED       +L++
Subjt:  EIQPEYQRWVTKLLGYDFDIEYNPRLENKAADALSR-------VPQLSELATLSVPNLIDVT-----QIDAEVRNDEYLRPIIDALREDPDSHPKFELRN

Query:  DKLL-YKGRMVVSATSSLIPTILHTYHDSVMGGHSGFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVE
          L+  K ++++   + L  TI+  YH+     H G       +     WKG++  +Q+YV     CQ NK+    P G LQP+    R WE +SMDF+ 
Subjt:  DKLL-YKGRMVVSATSSLIPTILHTYHDSVMGGHSGFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDISMDFVE

Query:  GLPKSHGKNSILVVVDRLSTR--------------------------------------------------------LKRSTTFHPQTDGQTEFVNNCLE
         LP+S G N++ VVVDR S                                                          +K S  + PQTDGQTE  N  +E
Subjt:  GLPKSHGKNSILVVVDRLSTR--------------------------------------------------------LKRSTTFHPQTDGQTEFVNNCLE

Query:  IYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINTTSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREV-A
          LRC CS HPN W   ++ V+  YN   H +   T F++V+  +  P +S  E  + +D  ++   E       + E L+    +MK+Y D   +E+  
Subjt:  IYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINTTSFQVVYGRAPLPLISYGENRTSNDVVEQQLLERDLALAALWERLHLAQERMKRYADKNRREV-A

Query:  YTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYPITECIGKVAYRLALPPN--SSIHDVFHVSQLKKCVGQQHQVQQNPMLITE
        +  G++V +K    R ++   H+  KLAP F GP+ + +  G   Y L LP +        FHVS L+K    +H  + N   I E
Subjt:  YTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYPITECIGKVAYRLALPPN--SSIHDVFHVSQLKKCVGQQHQVQQNPMLITE

Arabidopsis top hits

e value

%identity

Alignment

ATMG00850.1 DNA/RNA polymerases superfamily protein

5.0e-06

53.85

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Query:  QKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGW
        +++ ++  + EML++ II+P  SP+SSPVLLV+KKDGGW
Subjt:  QKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGW

ATMG00860.1 DNA/RNA polymerases superfamily protein

4.5e-39

56.92

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Query:  HLWAVFSTLQEHSLFANLKKCVFAQPRCEYLG--HWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWN
        HL  V    ++H  +AN KKC F QP+  YLG  H +S EGV ADP K+ AM+ WP PK   ELRGFLGLTGYYRRFV++YG +  PLT+LLKK++ +W 
Subjt:  HLWAVFSTLQEHSLFANLKKCVFAQPRCEYLG--HWVSAEGVKADPEKINAMLNWPTPKTIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWN

Query:  DDTSKAFDGLKKAMVTLPVLALPDFSLPFV
        +  + AF  LK A+ TLPVLALPD  LPFV
Subjt:  DDTSKAFDGLKKAMVTLPVLALPDFSLPFV

Sequences

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CDS sequence

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ATGAAGTTTGAATCGGATCAGGGGACGATAACACTCAAAGGGAATCCTTCTCTTACCCGTGCAGAAGTATCTCTGAAAATGTTATCTAAAACATGGTCAAAAGGGGACAA
AGGATACTTAGTTGAGCTGTGTGAAATACAAGACCCACCAATAGAAGGGCAAGGGAGTATGAAGAGGTTTAGCAACACTGAGGAACTACTTCCGAGCACCCGAGAACTTT
TGGAACGATTTCAAATGATTTTTGAGTTGCCCCCAGGATTACCTCCGAAACGAGAAGTTGATCACCAAATCAGTTTGAAGGATGAGCAAAAGACAGTGCAGGTGAGGCCA
TATAAGTACGCGCATGCACAGAAATCCGAGATAGAGAAAATGATTGAAGAAATGCTTCAATCTGGAATAATTAGACCCTGTCATAGCCCTTTTTCGAGCCCGGTGTTATT
AGTTCGGAAGAAAGATGGGGGATGGAGATTCTGCGTGGATTACAGGGCCTTGAACAGAGAAACAATTCCGAGTAAGTTTCCAATTCCAGTGATCGAAGAGCTTCTCGATG
AGTTACACGGTTCAAAGGTGTACACGAAGCTAGACCTGAAGTCTGGATATCACCAGATCAAGATGAAAGAGGAGGACATAAGCAAAACTGCTTTTCGTACACATCAGGGC
CAATATGAGTTCTTGGTTATGCCGTTCGGCTTAACGAATGCTCTAGCCACCTTCCAGAGCTTAATGAATCATGTTTTTCGATATTACTTGCGCAAATTTGTGTTAGTTTT
CTTCGATGACATATTAGTCTATAGCCCGAATTTAGAAACACACGAGCAACATCTGTGGGCGGTATTTAGCACTCTGCAGGAACACTCTTTGTTTGCAAATCTAAAGAAAT
GTGTGTTTGCACAACCCAGATGTGAGTACCTTGGGCACTGGGTATCTGCTGAAGGTGTGAAGGCAGATCCAGAGAAAATCAACGCAATGTTGAACTGGCCTACACCGAAA
ACGATCAAAGAGTTAAGGGGATTCTTGGGATTAACGGGCTATTATCGACGATTTGTAGAGAGTTATGGATCACTAGCAGCCCCATTGACTGACTTACTAAAAAAAGATGC
ATTTCAGTGGAACGACGACACCAGCAAGGCTTTCGATGGCCTAAAGAAAGCGATGGTCACACTACCTGTATTAGCCCTTCCTGATTTTTCCTTACCATTCGTGGTTGAAA
CTGATGCTTCGGGCACCGGCTTAGGGGTTGTTTTGTCGCAGAACAAGAGACCAATAGCGTTTTTTAGCCAACGGTTGTCTAATGTGGCTAGAAGAAAATCAATTTATGAA
AGAGAATTGATGGCTATAGTCCTAGCAGTACAGAGATGGAGACACTATCTATTGGGAAGAAAATTTCTGATTCGAACGGACCAAAGAGCACTTCGATACCTCACAGAACA
GACTGAGATTCAACCAGAATATCAACGATGGGTGACCAAACTATTAGGTTATGACTTCGACATCGAATACAACCCGAGGTTGGAAAATAAAGCAGCGGATGCTTTGTCCC
GAGTCCCTCAGTTATCCGAGCTAGCCACCCTATCAGTACCTAATCTAATTGATGTTACTCAGATTGACGCAGAGGTCCGTAACGATGAGTATTTGCGCCCTATCATTGAC
GCCCTTAGGGAGGATCCAGATAGCCATCCGAAGTTCGAACTTCGAAATGACAAATTGTTATACAAAGGAAGAATGGTTGTGTCAGCTACATCCTCGTTGATCCCAACGAT
TTTACATACGTACCATGACTCGGTTATGGGGGGTCATTCCGGTTTCCTCGGAACGTATAAACGGCTGACAGGTGAACTGTTTTGGAAGGGTATGAAGGCAGCTGTGCAGA
AATATGTGACTGAGTACGAAGTTTGCCAACGAAACAAAACCGAGGCGCGTTCACCAGCGGGGTTGTTGCAACCGTTAGAAATACCTGCTAGGATATGGGAGGACATATCC
ATGGACTTTGTCGAAGGGCTGCCAAAATCCCACGGGAAGAATTCCATTTTGGTGGTGGTAGACAGACTCAGTACGCGACTGAAGAGAAGCACGACTTTTCATCCACAGAC
GGATGGACAAACTGAGTTTGTAAACAACTGTCTTGAGATTTACTTAAGATGTTTTTGTAGCGAGCACCCCAACCAATGGAACAAATGGATGGCTTGGGTTGAATATTGGT
ATAATACCAACTATCATATCTCTATTAATACCACGTCATTCCAGGTGGTTTATGGGAGAGCCCCTCTGCCGCTTATCTCTTATGGAGAAAACAGGACTTCAAATGATGTT
GTGGAACAACAATTGTTAGAGAGGGATTTGGCTCTAGCAGCTTTGTGGGAACGCTTACACTTGGCTCAAGAACGGATGAAGCGTTATGCTGATAAGAATAGGCGGGAAGT
AGCTTACACCGAGGGGGAAATGGTGTATCTAAAGTTGCGACCGTATAGACAGCGTTCCCTTGCACGACACCGCTGTGAGAAATTGGCTCCAAAGTTTTTTGGACCCTATC
CAATCACGGAATGTATTGGCAAGGTGGCCTATCGATTGGCGCTACCACCAAATTCTTCGATTCATGATGTTTTTCATGTGTCCCAACTAAAAAAATGTGTGGGGCAACAG
CACCAGGTACAACAGAACCCCATGCTTATTACCGAGGATTTCGAATGGGTAGCTTCACCGGAGGAGGTGCTTGGATAG

mRNA sequence

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Protein sequence

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MKFESDQGTITLKGNPSLTRAEVSLKMLSKTWSKGDKGYLVELCEIQDPPIEGQGSMKRFSNTEELLPSTRELLERFQMIFELPPGLPPKREVDHQISLKDEQKTVQVRP
YKYAHAQKSEIEKMIEEMLQSGIIRPCHSPFSSPVLLVRKKDGGWRFCVDYRALNRETIPSKFPIPVIEELLDELHGSKVYTKLDLKSGYHQIKMKEEDISKTAFRTHQG
QYEFLVMPFGLTNALATFQSLMNHVFRYYLRKFVLVFFDDILVYSPNLETHEQHLWAVFSTLQEHSLFANLKKCVFAQPRCEYLGHWVSAEGVKADPEKINAMLNWPTPK
TIKELRGFLGLTGYYRRFVESYGSLAAPLTDLLKKDAFQWNDDTSKAFDGLKKAMVTLPVLALPDFSLPFVVETDASGTGLGVVLSQNKRPIAFFSQRLSNVARRKSIYE
RELMAIVLAVQRWRHYLLGRKFLIRTDQRALRYLTEQTEIQPEYQRWVTKLLGYDFDIEYNPRLENKAADALSRVPQLSELATLSVPNLIDVTQIDAEVRNDEYLRPIID
ALREDPDSHPKFELRNDKLLYKGRMVVSATSSLIPTILHTYHDSVMGGHSGFLGTYKRLTGELFWKGMKAAVQKYVTEYEVCQRNKTEARSPAGLLQPLEIPARIWEDIS
MDFVEGLPKSHGKNSILVVVDRLSTRLKRSTTFHPQTDGQTEFVNNCLEIYLRCFCSEHPNQWNKWMAWVEYWYNTNYHISINTTSFQVVYGRAPLPLISYGENRTSNDV
VEQQLLERDLALAALWERLHLAQERMKRYADKNRREVAYTEGEMVYLKLRPYRQRSLARHRCEKLAPKFFGPYPITECIGKVAYRLALPPNSSIHDVFHVSQLKKCVGQQ
HQVQQNPMLITEDFEWVASPEEVLG

Sed0013504 (gene) of Chayote v1 genome