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Sed0013517 (gene) of Chayote v1 genome

Gene IDSed0013517
OrganismSechium edule (Chayote v1)
DescriptionRibosome maturation factor
Genome locationLG01:70107112..70108849
RNA-Seq ExpressionSed0013517
SyntenySed0013517
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606266.1 hypothetical protein SDJN03_03583, partial [Cucurbita argyrosperma subsp. sororia]5.2e-6281.13Show/hide
Query:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSPSSS-ILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKL+GHGAGA +DAVPADD KRNKHSPSS  ILNYD QDD+K +KSFRFS P+ SP RQE+FVH IPILTIICFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSPSSS-ILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
        QFHGFKRPS+ L + KA+GD+LI PKKGNILAIQSLRNLKEIEKSH  +SR+PRKL DF
Subjt:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
XP_008466004.1 PREDICTED: uncharacterized protein LOC103503567 isoform X1 [Cucumis melo]4.9e-6080.62Show/hide
Query:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSP-SSSILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKL+GHGAGA +D  PADD KR KHSP SSSILNY  QDDDK +KSFRFS PS SP RQE+ VH IPILTIICFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSP-SSSILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSDRLADFKA-DGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
        QFHGFKRPS +LA+ KA DG +LI PKKGNILAIQS RNLKEIEKSH  KSR PRKLADF
Subjt:  QFHGFKRPSDRLADFKA-DGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
XP_011652641.1 uncharacterized protein LOC101212292 isoform X1 [Cucumis sativus]5.8e-6180.5Show/hide
Query:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSP-SSSILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKL+GHGAGA +D  PADD KR KHSP SSSILNY  QDDDK +KSFRFS PS SP RQE+ VH IPILTIICFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSP-SSSILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
        QFHGFK PS +LA+ KADGD+LI PKKGNILAIQS RNLKEIEKS+  KSR PRKLADF
Subjt:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
XP_022930990.1 uncharacterized protein LOC111437318 [Cucurbita moschata]1.5e-6180.5Show/hide
Query:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSPSSS-ILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKL+GHGAGA +DAVPADD KRNKHSPSS  ILNYD QDD+K +KSFRFS P+ SP RQE+FVH IPILTI CFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSPSSS-ILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
        QFHGFKRPS+ L + KA+GD+LI PKKGNILAIQSLRNLKEIEKSH  +SR+PRKL DF
Subjt:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
XP_022995482.1 uncharacterized protein LOC111491006 [Cucurbita maxima]1.6e-6383.02Show/hide
Query:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSPSSS-ILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKL+GHGAGA +DAVPADD KRNKHSPSSS ILNYD QDDDK +KSFRFS P+ SP RQE+FVH IPILTIICFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSPSSS-ILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
        QFHGFKRPS+ L + KA+GD+LI PKKGNILAIQSLRNLKEIEKSH  +SR+PRKLADF
Subjt:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
TrEMBL top hitse value%identityAlignment
A0A1S3CQ78 uncharacterized protein LOC103503567 isoform X12.4e-6080.62Show/hide
Query:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSP-SSSILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKL+GHGAGA +D  PADD KR KHSP SSSILNY  QDDDK +KSFRFS PS SP RQE+ VH IPILTIICFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSP-SSSILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSDRLADFKA-DGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
        QFHGFKRPS +LA+ KA DG +LI PKKGNILAIQS RNLKEIEKSH  KSR PRKLADF
Subjt:  QFHGFKRPSDRLADFKA-DGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
A0A6J1EYA9 uncharacterized protein LOC1114373187.4e-6280.5Show/hide
Query:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSPSSS-ILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKL+GHGAGA +DAVPADD KRNKHSPSS  ILNYD QDD+K +KSFRFS P+ SP RQE+FVH IPILTI CFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSPSSS-ILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
        QFHGFKRPS+ L + KA+GD+LI PKKGNILAIQSLRNLKEIEKSH  +SR+PRKL DF
Subjt:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
A0A6J1HI49 uncharacterized protein LOC111463852 isoform X14.0e-6077.36Show/hide
Query:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSP-SSSILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKL+GHGAGA +D +P  D KR KHSP SSSI+ YD QDD+K +KSFRFS PS SP RQE  VH IPILT+ICFLILYICSH+PSQSDLA
Subjt:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSP-SSSILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
        QFHGFKRPS++LA+ KADGD+LI PK+GNI+AIQS RNLKEIEKS   KSRSPRKLADF
Subjt:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
A0A6J1HRQ8 uncharacterized protein LOC111466893 isoform X13.1e-6078.62Show/hide
Query:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSP-SSSILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKL+GHGAGA +D +PADD KR KHSP SSSI+ YD QDDDK +KSFRFS PS SP RQE  VH IPILTIICFLILYICSH+PSQSDLA
Subjt:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSP-SSSILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
        QFH FKRPS++LA+ KADGD+LI PK+GNILAIQS R L+EIEKS   KSRSPRKLADF
Subjt:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
A0A6J1JZ13 uncharacterized protein LOC1114910067.9e-6483.02Show/hide
Query:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSPSSS-ILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKL+GHGAGA +DAVPADD KRNKHSPSSS ILNYD QDDDK +KSFRFS P+ SP RQE+FVH IPILTIICFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSPSSS-ILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
        QFHGFKRPS+ L + KA+GD+LI PKKGNILAIQSLRNLKEIEKSH  +SR+PRKLADF
Subjt:  QFHGFKRPSDRLADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35470.1 unknown protein1.9e-2547.02Show/hide
Query:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSPSSSILNYDEQDDD-KDAKSFRFSSPSS----SPTRQERFVHVIPILTIICFLILYICSHSPSQ
        MQR SL S  SKL+ +G G   D    DD K    SPSSS    D  D + KD K  R SS  S    +  +QE+ VH IPILT+ICF+ILY+ S++PSQ
Subjt:  MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSPSSSILNYDEQDDD-KDAKSFRFSSPSS----SPTRQERFVHVIPILTIICFLILYICSHSPSQ

Query:  SDLAQFHGFKRPSDRLADFKADGDDLITPKKGNILAIQ-SLRNLKEIE----KSHPHKSRSPRKLADF
        SDLAQF+GF RPS  L     +GD++    + + L+I+ S+RNL+E E    KS P +  S RK ADF
Subjt:  SDLAQFHGFKRPSDRLADFKADGDDLITPKKGNILAIQ-SLRNLKEIE----KSHPHKSRSPRKLADF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGGCAATCTCTCGGCTCACCAGTTTCCAAGCTCTACGGCCATGGCGCCGGAGCAAACACCGACGCAGTTCCGGCCGACGATCACAAGCGCAACAAGCACTCTCC
ATCTTCTTCGATTCTCAACTACGACGAACAAGACGACGACAAAGACGCTAAATCCTTCCGATTCTCATCTCCGTCGTCTTCTCCGACGCGGCAGGAGAGATTCGTTCACG
TCATTCCGATCCTCACCATTATCTGCTTCCTCATCCTCTACATCTGCTCGCACAGTCCTTCGCAATCAGATCTGGCTCAGTTTCATGGATTCAAACGTCCTTCAGATCGT
TTAGCAGATTTCAAAGCCGATGGAGACGATCTTATCACACCGAAGAAAGGCAATATTCTGGCGATTCAAAGTCTCCGCAACCTAAAAGAGATCGAGAAATCACATCCTCA
CAAATCTCGCTCGCCGAGGAAACTCGCCGATTTCTAG
mRNA sequenceShow/hide mRNA sequence
GTGCAAAGTAAGAATAATAATAGTTCAGGGGTCTCATTGCAAGAGCCAAACGTCACGAGGGCCAAATGGAAAACTCACACAAAAAGTTAACATCGCACTGGCCTACTTCC
AGTGAGCAACATCGCTTCTCTCTCTACTCTTTCTCTCTCTACCATGCAAAGGCAATCTCTCGGCTCACCAGTTTCCAAGCTCTACGGCCATGGCGCCGGAGCAAACACCG
ACGCAGTTCCGGCCGACGATCACAAGCGCAACAAGCACTCTCCATCTTCTTCGATTCTCAACTACGACGAACAAGACGACGACAAAGACGCTAAATCCTTCCGATTCTCA
TCTCCGTCGTCTTCTCCGACGCGGCAGGAGAGATTCGTTCACGTCATTCCGATCCTCACCATTATCTGCTTCCTCATCCTCTACATCTGCTCGCACAGTCCTTCGCAATC
AGATCTGGCTCAGTTTCATGGATTCAAACGTCCTTCAGATCGTTTAGCAGATTTCAAAGCCGATGGAGACGATCTTATCACACCGAAGAAAGGCAATATTCTGGCGATTC
AAAGTCTCCGCAACCTAAAAGAGATCGAGAAATCACATCCTCACAAATCTCGCTCGCCGAGGAAACTCGCCGATTTCTAGACTTCGCATTTCTGTTTTTCTGATCTTCCG
GTAAAATCTCCGCCACCTCGTTTTCGCCGCAACGGCTTCACTCGCCGGCGCGTGTGCGACCGTAACTATTTTTAGAAAAGCTTCTCATGTACATCAGATACTCCGTCGGA
TTAAATTGTTTTATCTCTTTATTTTTTAAAAAAAAATTTGTAGCATTTGCTTTCTGTAACTTCCGACGAAGATAATCATCAAAATTTAATAAGAACAAAGAATGAATGAA
CAATCGAACTAAAAAGAAAAAGAGTAAATTATCAAGAAAACAGAATCGCCGATCGACGCGCCGCTGATTCGGAGCGCGTGAACTGTCGGCGCCGGTGCGGCGGAGATGAT
AATGGAAGCCAGCTGGAAAATATTTACTGTTAATTTTCGATTTTCCGAATCGGACCGTTACAGCATTGCAAAAGGCGCCGAGATGCCAGCTGGAAAAATGCTGTAGTTGC
TGACAGTATCGGGTTCAGGTTTCTTTACATCGAATTTACTTTTAGGCCCTCCATTTATTGTCTATTTACTTTTTGAGGCATCCGCCTTTTGATTTAATCTTACCTTCAAA
TAATATAATTTATTGTTCTTCCTCATGAATTAATTTACGTGTATAGTTTTAGTAAGATATGTGATTACTGCATTTTTTATTTTGTAAATAGTATGGTTTGTCGCTTGATA
TTTTTATTTTCTGAATTTTCTTTTTCTTTTCTTTCTTTTTTTTTTGCCAAAATAATGGACCAGCGGATACCAATTTGTGAATGGTAGTAGTACCTTAAATTCATTCATCT
TCTGACAAAATGAAAAACCTCAATGGCATCCTGTCTAGTAATTATGGTCTGAGTACTCCACCAAATGTTAATGAGTAATTTTTATTTTATTTTTTTTTTTTTTTGAAACA
ATGAGTAATTTTTTTATAACTAG
Protein sequenceShow/hide protein sequence
MQRQSLGSPVSKLYGHGAGANTDAVPADDHKRNKHSPSSSILNYDEQDDDKDAKSFRFSSPSSSPTRQERFVHVIPILTIICFLILYICSHSPSQSDLAQFHGFKRPSDR
LADFKADGDDLITPKKGNILAIQSLRNLKEIEKSHPHKSRSPRKLADF