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Sed0013553 (gene) of Chayote v1 genome

Gene IDSed0013553
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:33851220..33851468
RNA-Seq ExpressionSed0013553
SyntenySed0013553
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53741.1 hypothetical protein Csa_015371 [Cucumis sativus]5.4e-1060Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGRKDNFNYEGVENEDGEDNVNLLAGYNPRE
        MNQ  ++  EISEAR  EAQ G I RLTQV+N L+DRL+RM VAL N  QG   N   EGVENE  EDN  LLA  NP E
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGRKDNFNYEGVENEDGEDNVNLLAGYNPRE

XP_022925325.1 uncharacterized protein LOC111432615 [Cucurbita moschata]8.6e-1662.5Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGRKDNFNYEGVENEDGEDNVNLLAGYNPREG
        MNQD  +G EI+EARWREAQ G I RL QV+++L+DR+ER+++ALGN QGR+   N EGVENE+ +DNV LLAG++PR G
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGRKDNFNYEGVENEDGEDNVNLLAGYNPREG

XP_022929948.1 uncharacterized protein LOC111436410 [Cucurbita moschata]2.3e-1663.75Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGRKDNFNYEGVENEDGEDNVNLLAGYNPREG
        MNQDG +G EI+EARWREAQ G I  L QV+++L+DR+ER+E+ALGN QGR+   N EGVENE+ +DNV LLAG++PR G
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGRKDNFNYEGVENEDGEDNVNLLAGYNPREG

XP_023534142.1 uncharacterized protein LOC111795765 [Cucurbita pepo subsp. pepo]4.5e-1765Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGRKDNFNYEGVENEDGEDNVNLLAGYNPREG
        MNQDG +G EI+EARWREAQ G I RL QV+++L+DR+ER+E+ALGN QGR+   N EGVENE+ +DNV LLAG++PR G
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGRKDNFNYEGVENEDGEDNVNLLAGYNPREG

XP_038888883.1 uncharacterized protein LOC120078660 [Benincasa hispida]7.0e-1057.69Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGRKDNFNYEGVENEDGEDNVNLLAGYNPR
        M+Q   D  E SEAR+REAQ GVI RLT+VV SL DR+ERMEVAL NPQ  +   N E  +NE+ +DN  LL G N R
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGRKDNFNYEGVENEDGEDNVNLLAGYNPR

TrEMBL top hitse value%identityAlignment
A0A0A0KC00 Uncharacterized protein5.8e-1056.96Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGRKDNFNYEGVENEDGEDNVNLLAGYNPR
        MN+  ++  +ISEA+  EAQ G I RLTQV+N L++RL+RMEVAL N  QG   N   EGVENE+ EDN   LAG NPR
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGRKDNFNYEGVENEDGEDNVNLLAGYNPR

A0A0A0L0S3 Uncharacterized protein2.6e-1060Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGRKDNFNYEGVENEDGEDNVNLLAGYNPRE
        MNQ  ++  EISEAR  EAQ G I RLTQV+N L+DRL+RM VAL N  QG   N   EGVENE  EDN  LLA  NP E
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGRKDNFNYEGVENEDGEDNVNLLAGYNPRE

A0A6J1EHL9 uncharacterized protein LOC1114326154.1e-1662.5Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGRKDNFNYEGVENEDGEDNVNLLAGYNPREG
        MNQD  +G EI+EARWREAQ G I RL QV+++L+DR+ER+++ALGN QGR+   N EGVENE+ +DNV LLAG++PR G
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGRKDNFNYEGVENEDGEDNVNLLAGYNPREG

A0A6J1ETN1 uncharacterized protein LOC1114364101.1e-1663.75Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGRKDNFNYEGVENEDGEDNVNLLAGYNPREG
        MNQDG +G EI+EARWREAQ G I  L QV+++L+DR+ER+E+ALGN QGR+   N EGVENE+ +DNV LLAG++PR G
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGRKDNFNYEGVENEDGEDNVNLLAGYNPREG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAAGATGGGAGAGATGGAGAGGAGATTAGTGAAGCTAGGTGGAGAGAAGCTCAAAGTGGGGTCATTAATCGTTTAACTCAAGTTGTTAATTCCTTAAGCGATAG
GTTGGAGCGAATGGAAGTAGCTTTAGGAAATCCTCAAGGGAGGAAGGATAACTTTAATTATGAAGGAGTTGAAAATGAAGATGGAGAAGATAATGTTAACCTCTTAGCGG
GATACAATCCACGGGAGGGAGAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCAAGATGGGAGAGATGGAGAGGAGATTAGTGAAGCTAGGTGGAGAGAAGCTCAAAGTGGGGTCATTAATCGTTTAACTCAAGTTGTTAATTCCTTAAGCGATAG
GTTGGAGCGAATGGAAGTAGCTTTAGGAAATCCTCAAGGGAGGAAGGATAACTTTAATTATGAAGGAGTTGAAAATGAAGATGGAGAAGATAATGTTAACCTCTTAGCGG
GATACAATCCACGGGAGGGAGAGTTTTAG
Protein sequenceShow/hide protein sequence
MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGRKDNFNYEGVENEDGEDNVNLLAGYNPREGEF