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Sed0013557 (gene) of Chayote v1 genome

Gene IDSed0013557
OrganismSechium edule (Chayote v1)
DescriptionProlamin_like domain-containing protein
Genome locationLG09:4495124..4495525
RNA-Seq ExpressionSed0013557
SyntenySed0013557
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008502 - Prolamin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046835.1 hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa]2.4e-4469.17Show/hide
Query:  ILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTFWFDFPDLEVLKPN
        IL +   L  LV  S   +DYNSPIW+GWVDEDRGYTLRPCLD +++AKCQVELY YYFNISKKELDLNCCVFVK MGK CA+AFTFW+ FP LE+ +PN
Subjt:  ILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTFWFDFPDLEVLKPN

Query:  PMMAYKTCVRRLDAPSPSKF
        PM  Y  C+ RLDAP P+ F
Subjt:  PMMAYKTCVRRLDAPSPSKF

KAA0046841.1 hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa]5.6e-4164.44Show/hide
Query:  MTKKTNTVVTLMGILSWTTILPTLVPRSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAF
        M   TNTV  ++ IL     L  LV  SMA   DDYNSPIWNGWVDEDR   LRPCLDM+K+AKCQV+LY YYFNISKKELDL CCVFVK MGK CA AF
Subjt:  MTKKTNTVVTLMGILSWTTILPTLVPRSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAF

Query:  TFWFDFPDLEVLKPNPMMAYKTCVRRLDAPSPSKF
          W++FP LEV +PNPM+ Y  CV RL A  P+ F
Subjt:  TFWFDFPDLEVLKPNPMMAYKTCVRRLDAPSPSKF

KAE8646662.1 hypothetical protein Csa_004797, partial [Cucumis sativus]1.3e-3464.29Show/hide
Query:  KTNTVVTLMGILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTFWFD
        KTN +  ++ +LS T  L  LV      +DYNS IWN W+DEDR +TLRPCLD +++AKCQVELY YYFNISK+ELDLNCCVFVK MGK CA+AFTFW+ 
Subjt:  KTNTVVTLMGILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTFWFD

Query:  FPDLEVLKPNPM
        FP LE+ +PNPM
Subjt:  FPDLEVLKPNPM

KAG6575249.1 hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3456.92Show/hide
Query:  MTKKTNTVVTLMGILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTF
        M K+T+T+  ++ +L     L   V  + A  DYNSPIW+ W+DEDR Y LRPCL+++K+AKCQV+LY  YFN+SK+ELDLNCCVFVK MGK+CA  F  
Subjt:  MTKKTNTVVTLMGILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTF

Query:  WFDFPDLEVLKPNPMMAYKTCVRRLDAPSP
        WFD+P  EV KPNPM  YK CV RL +  P
Subjt:  WFDFPDLEVLKPNPMMAYKTCVRRLDAPSP

KAG6578867.1 hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]3.6e-4068.03Show/hide
Query:  MGILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTFWFDFPDLEVLK
        M IL     L  L   S A DDYNSPIW+ WVDEDRG  LRPCLDM+K+AKCQVELY YYFNISKKELDLNCCVFVK MGK CA+AF  WF FP+ EV +
Subjt:  MGILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTFWFDFPDLEVLK

Query:  PNPMMAYKTCVRRLDAPSPSKF
         NPM  YK CV RLDA  P+ F
Subjt:  PNPMMAYKTCVRRLDAPSPSKF

TrEMBL top hitse value%identityAlignment
A0A0A0KEB8 Prolamin_like domain-containing protein7.9e-4161.83Show/hide
Query:  MTKKTNTVVTLMGILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTF
        M  KTN +  ++ +LS    L  LV  S   +DYNS IWN W+DEDR +TLRPCLD +++AKCQVELY YYFNISKKELDLNCCVFVK MGK CA+AFTF
Subjt:  MTKKTNTVVTLMGILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTF

Query:  WFDFPDLEVLKPNPMMAYKTCVRRLDAPSPS
        W+ FP LE+ +PNPM  Y  C  RL AP P+
Subjt:  WFDFPDLEVLKPNPMMAYKTCVRRLDAPSPS

A0A0A0KQ41 Prolamin_like domain-containing protein1.6e-3356.45Show/hide
Query:  VVTLMGILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTFWFDFPDL
        VV ++ +L   ++   LV  S   D+  S IW+ W+DEDR  TL PCL M+++ KCQVELY YYFNISKKELDL+CCV+V +MGK CA AF FWF FP L
Subjt:  VVTLMGILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTFWFDFPDL

Query:  EVLKPNPMMAYKTCVRRLDAPSPS
        E LKPNPM  Y  C +RL  P+P+
Subjt:  EVLKPNPMMAYKTCVRRLDAPSPS

A0A0A0L535 Prolamin_like domain-containing protein1.6e-2544.36Show/hide
Query:  MTKKTNTVVTLMGILSWTTILP---TLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKA
        M K +N+   L+ ++  + ++     LV  S+  D+  S IW+GW+D+DR   L  CL ++K+ KCQVELY YYFN SKKE+DL+CCV+V ++G+ CA +
Subjt:  MTKKTNTVVTLMGILSWTTILP---TLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKA

Query:  FTFWFDFPDLEVLKPNPMMAYKTCVRRLDAPSP
        F  WF     + LKPNPM  Y  C +RL  P+P
Subjt:  FTFWFDFPDLEVLKPNPMMAYKTCVRRLDAPSP

A0A5A7TZR1 Prolamin_like domain-containing protein2.7e-4164.44Show/hide
Query:  MTKKTNTVVTLMGILSWTTILPTLVPRSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAF
        M   TNTV  ++ IL     L  LV  SMA   DDYNSPIWNGWVDEDR   LRPCLDM+K+AKCQV+LY YYFNISKKELDL CCVFVK MGK CA AF
Subjt:  MTKKTNTVVTLMGILSWTTILPTLVPRSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAF

Query:  TFWFDFPDLEVLKPNPMMAYKTCVRRLDAPSPSKF
          W++FP LEV +PNPM+ Y  CV RL A  P+ F
Subjt:  TFWFDFPDLEVLKPNPMMAYKTCVRRLDAPSPSKF

A0A5D3C280 Prolamin_like domain-containing protein1.2e-4469.17Show/hide
Query:  ILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTFWFDFPDLEVLKPN
        IL +   L  LV  S   +DYNSPIW+GWVDEDRGYTLRPCLD +++AKCQVELY YYFNISKKELDLNCCVFVK MGK CA+AFTFW+ FP LE+ +PN
Subjt:  ILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTFWFDFPDLEVLKPN

Query:  PMMAYKTCVRRLDAPSPSKF
        PM  Y  C+ RLDAP P+ F
Subjt:  PMMAYKTCVRRLDAPSPSKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGAAAACCAACACAGTGGTGACATTAATGGGGATTCTCTCATGGACAACAATTTTGCCAACCTTAGTTCCACGCTCGATGGCAGCCGACGATTACAATTCACC
TATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCCTTCGACCATGTCTGGATATGGTGAAGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATA
TAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTCTTCGTCAAATTCATGGGAAAAAGTTGCGCCAAAGCTTTTACTTTTTGGTTTGACTTTCCGGATTTGGAAGTCTTG
AAACCTAATCCCATGATGGCATATAAAACTTGTGTTAGAAGACTTGATGCTCCCTCACCTTCGAAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAGAAAACCAACACAGTGGTGACATTAATGGGGATTCTCTCATGGACAACAATTTTGCCAACCTTAGTTCCACGCTCGATGGCAGCCGACGATTACAATTCACC
TATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCCTTCGACCATGTCTGGATATGGTGAAGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATA
TAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTCTTCGTCAAATTCATGGGAAAAAGTTGCGCCAAAGCTTTTACTTTTTGGTTTGACTTTCCGGATTTGGAAGTCTTG
AAACCTAATCCCATGATGGCATATAAAACTTGTGTTAGAAGACTTGATGCTCCCTCACCTTCGAAATTTTAA
Protein sequenceShow/hide protein sequence
MTKKTNTVVTLMGILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTFWFDFPDLEVL
KPNPMMAYKTCVRRLDAPSPSKF