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Sed0013560 (gene) of Chayote v1 genome

Gene IDSed0013560
OrganismSechium edule (Chayote v1)
DescriptionLow temperature and salt responsive protein family
Genome locationLG04:2800830..2802390
RNA-Seq ExpressionSed0013560
SyntenySed0013560
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65991.1 hypothetical protein Csa_007015 [Cucumis sativus]1.5e-1989.47Show/hide
Query:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        MAD+ T N IDIL+AILLPPLGVFLKFGCQVEFWICLVLTF GYIPGIIYAVYAITK
Subjt:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

RZC48826.1 hypothetical protein C5167_017259 [Papaver somniferum]2.6e-1984.21Show/hide
Query:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        MAD+ST N IDIL+AI+LPPLGVFLKFGCQ+EFWICL+LTF GYIPGIIYA+YAITK
Subjt:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

XP_004494506.1 hydrophobic protein LTI6B-like [Cicer arietinum]2.6e-1987.72Show/hide
Query:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        MAD+ TAN IDIL+AILLPPLGVFLKFGC VEFWICLVLTF GYIPGIIYA+YAITK
Subjt:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

XP_008450512.1 PREDICTED: hydrophobic protein LTI6B-like [Cucumis melo]2.0e-1989.47Show/hide
Query:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        MAD+ T N IDIL+AILLPPLGVFLKFGCQVEFWICLVLTF GYIPGIIYAVYAITK
Subjt:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

XP_038879764.1 hydrophobic protein LTI6B-like [Benincasa hispida]1.2e-1989.47Show/hide
Query:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        MAD++T N IDIL+AILLPPLGVFLKFGCQVEFWICLVLTF GYIPGIIYAVYAITK
Subjt:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

TrEMBL top hitse value%identityAlignment
A0A0A0M1D6 Uncharacterized protein7.3e-2089.47Show/hide
Query:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        MAD+ T N IDIL+AILLPPLGVFLKFGCQVEFWICLVLTF GYIPGIIYAVYAITK
Subjt:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

A0A1S2XTZ3 hydrophobic protein LTI6B-like1.2e-1987.72Show/hide
Query:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        MAD+ TAN IDIL+AILLPPLGVFLKFGC VEFWICLVLTF GYIPGIIYA+YAITK
Subjt:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

A0A1S3BNR9 hydrophobic protein LTI6B-like9.6e-2089.47Show/hide
Query:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        MAD+ T N IDIL+AILLPPLGVFLKFGCQVEFWICLVLTF GYIPGIIYAVYAITK
Subjt:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

A0A200Q034 Proteolipid membrane potential modulator2.1e-1985.96Show/hide
Query:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        MAD+ST   IDIL+AI+LPPLGVFLKFGCQVEFWICL+LTFLGY+PGIIYAVYAITK
Subjt:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

A0A4Y7IL50 Uncharacterized protein1.2e-1984.21Show/hide
Query:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        MAD+ST N IDIL+AI+LPPLGVFLKFGCQ+EFWICL+LTF GYIPGIIYA+YAITK
Subjt:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

SwissProt top hitse value%identityAlignment
A2Y075 Hydrophobic protein LTI6B4.6e-1988.46Show/hide
Query:  TANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        TAN IDILIAI+LPPLGVFLKFGC  EFWICL+LTFLGYIPGIIYA+YAITK
Subjt:  TANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

Q0DKW8 Hydrophobic protein LTI6B4.6e-1988.46Show/hide
Query:  TANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        TAN IDILIAI+LPPLGVFLKFGC  EFWICL+LTFLGYIPGIIYA+YAITK
Subjt:  TANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

Q8H5T6 Hydrophobic protein LTI6A1.9e-1775.44Show/hide
Query:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        MAD STA  IDI++AI+LPPLGVF KFGC +EFWICL+LTF GY+PGIIYAV+ ITK
Subjt:  MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

Q9ZNQ7 Hydrophobic protein RCI2A3.5e-1983.02Show/hide
Query:  STANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        STA F+DI+IAILLPPLGVFL+FGC VEFWICLVLT LGYIPGIIYA+Y +TK
Subjt:  STANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

Q9ZNS6 Hydrophobic protein RCI2B8.6e-1873.58Show/hide
Query:  STANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        STA F++I++AI+LPPLGVFLKFGC+VEFWICL+LT  GY+PGI+YA+Y ITK
Subjt:  STANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family1.5e-1254Show/hide
Query:  NFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        +F+++L AI +PP+GVFL++G  +EFW+CL+LT   +IPG+IYA+Y +TK
Subjt:  NFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

AT2G38905.1 Low temperature and salt responsive protein family2.4e-1572.34Show/hide
Query:  FIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAI
        F++I++AILLPP+GVFL++GC VEFWICL+LT LGYIPGIIYA+Y +
Subjt:  FIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAI

AT3G05880.1 Low temperature and salt responsive protein family2.5e-2083.02Show/hide
Query:  STANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        STA F+DI+IAILLPPLGVFL+FGC VEFWICLVLT LGYIPGIIYA+Y +TK
Subjt:  STANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

AT3G05890.1 Low temperature and salt responsive protein family6.1e-1973.58Show/hide
Query:  STANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK
        STA F++I++AI+LPPLGVFLKFGC+VEFWICL+LT  GY+PGI+YA+Y ITK
Subjt:  STANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK

AT4G30650.1 Low temperature and salt responsive protein family4.3e-1279.17Show/hide
Query:  FIDILIAILLPPLGVFLKFG-CQVEFWICLVLTFLGYIPGIIYAVYAI
        F +ILIAILLPPLGV LK G C VEF ICLVLT LGYIPGIIYA+Y I
Subjt:  FIDILIAILLPPLGVFLKFG-CQVEFWICLVLTFLGYIPGIIYAVYAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATCAAAGTACAGCAAACTTCATAGACATTCTGATTGCTATTCTTTTGCCTCCTCTTGGTGTTTTCCTCAAATTTGGCTGCCAAGTTGAGTTTTGGATCTGTTT
GGTCCTAACTTTCTTAGGATACATTCCTGGGATTATTTATGCTGTTTATGCCATCACCAAGTGA
mRNA sequenceShow/hide mRNA sequence
CCACCCACAACTCCCAACTTGTATATCAATTTTAATTTTCTCTCTCTTTCCTATTTTTTTTTTATAAAAAAAGAAAAAAAACCAACTTATTATTTTGTGAAGAAAAAAGA
AAGAAAAAATGGCAGATCAAAGTACAGCAAACTTCATAGACATTCTGATTGCTATTCTTTTGCCTCCTCTTGGTGTTTTCCTCAAATTTGGCTGCCAAGTTGAGTTTTGG
ATCTGTTTGGTCCTAACTTTCTTAGGATACATTCCTGGGATTATTTATGCTGTTTATGCCATCACCAAGTGATAAGGGTATGAAAGTTTGAAAGGATTGTGATGGAAAAT
TGAAGGCTTAGTTAAATTTTTATTAATTTTCAGTTTCACTTTCTCTTTGTTGTTCATTAGTGTTCTGTGTTCATGTGTGACCAAAGTGACGTAAGCCATTTGTGCTTCTT
TTAAAATTATTTCTTTTTGTAATTTTAAATATTTCATATTTAATTTGGTGTTTGATTTTGTGTTTATTGTATTAATTGATTTGGTTGCTGTAAAGAGAAAGGGAAAGTTG
GTTAGAGAATTGGAATGTGTGATTGTGGGTTACGTTTCTTTCTTTGATTCTCTAAAAAATAAAAAAAGTTTATGCTTTAACTTTC
Protein sequenceShow/hide protein sequence
MADQSTANFIDILIAILLPPLGVFLKFGCQVEFWICLVLTFLGYIPGIIYAVYAITK