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Sed0013570 (gene) of Chayote v1 genome

Gene IDSed0013570
OrganismSechium edule (Chayote v1)
Descriptionmetallothionein-like protein LSC54
Genome locationLG13:19318238..19319248
RNA-Seq ExpressionSed0013570
SyntenySed0013570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019194.1 hypothetical protein SDJN02_18152 [Cucurbita argyrosperma subsp. argyrosperma]7.1e-0884.85Show/hide
Query:  MASGCKCGDNCSCGDSCNCLSGTIKDASSLVNM
        MASGCKCGDNCSCGDSCNCLSGT+K+ +SL+NM
Subjt:  MASGCKCGDNCSCGDSCNCLSGTIKDASSLVNM
XP_022997994.1 metallothionein-like protein LSC54 [Cucurbita maxima]5.1e-0660.78Show/hide
Query:  MASGCKCGDNCSCGDSCNCLSGTIKDASSLVNMNHGCDCCDASCSCDGCSC
        M SGCKCGD+CSCGDSCNC SG+I +A   +    GC  C +SCSCD C+C
Subjt:  MASGCKCGDNCSCGDSCNCLSGTIKDASSLVNMNHGCDCCDASCSCDGCSC
TrEMBL top hitse value%identityAlignment
A0A6J1KD42 metallothionein-like protein LSC542.5e-0660.78Show/hide
Query:  MASGCKCGDNCSCGDSCNCLSGTIKDASSLVNMNHGCDCCDASCSCDGCSC
        M SGCKCGD+CSCGDSCNC SG+I +A   +    GC  C +SCSCD C+C
Subjt:  MASGCKCGDNCSCGDSCNCLSGTIKDASSLVNMNHGCDCCDASCSCDGCSC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTGGCTGCAAGTGTGGTGACAATTGCTCTTGTGGAGATAGCTGCAATTGTCTCTCTGGAACCATCAAAGACGCCAGTTCCTTAGTTAACATGAATCACGGCTG
CGACTGCTGCGATGCGAGCTGCTCGTGTGACGGATGCAGCTGCTGCTGA
mRNA sequenceShow/hide mRNA sequence
TTTGAAAATTTTGATTTCTCTAAAAAATAATATGGCTTCTGGCTGCAAGTGTGGTGACAATTGCTCTTGTGGAGATAGCTGCAATTGTCTCTCTGGAACCATCAAAGACG
CCAGTTCCTTAGTTAACATGAATCACGGCTGCGACTGCTGCGATGCGAGCTGCTCGTGTGACGGATGCAGCTGCTGCTGATGTGCTAGGTGAGAGATGGATGTAGCCCTT
AAACAACAAAGCTTGTGAAATGAAATAAAGTTATTTGATCTGTTTTTGCAATTTGCATGAATGAATATATGTACTGATGGATGAAATCTAGTGTGTGTGAAATATGTGCT
GCTTTGTTGTGGGCTGTGTGGCTAGGGTTTATGTTGATGTTTCAATATCAAAACTAAAAGTGTGTGTTTAGATTTGTGTGAAATAAGAATTTGGTAATTTTGTGTGTA
Protein sequenceShow/hide protein sequence
MASGCKCGDNCSCGDSCNCLSGTIKDASSLVNMNHGCDCCDASCSCDGCSCC