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Sed0013575 (gene) of Chayote v1 genome

Gene IDSed0013575
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:32328624..32328902
RNA-Seq ExpressionSed0013575
SyntenySed0013575
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFK41124.1 unknown [Lotus japonicus]3.8e-0858.24Show/hide
Query:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSFLW------------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIGGGGLG
        MG M L  +SLALMVV RHTAASKSTSP+STGQ V                STHAPSF VSIG V  C GG    GDGT G    GGGGLG
Subjt:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSFLW------------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIGGGGLG

KAB1205160.1 hypothetical protein CJ030_MR7G022012 [Morella rubra]8.9e-1059.14Show/hide
Query:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSFLW------------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIG-GGGLGT
        MG M L F+SLAL+VV RHTAASKS SP STGQHVS               STHAP+F VS+G V  C GG    GDGT G G IG GGGLGT
Subjt:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSFLW------------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIG-GGGLGT

KAF4399859.1 hypothetical protein G4B88_021073 [Cannabis sativa]7.8e-0652.17Show/hide
Query:  MSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSFL------------WSTHAPSFSVSIGQVAAC--FGGHGVPGD-GTAGAGFIGGGGLGT
        ++LT +SLAL+ VHR TAASKST P STGQH+SF              STHAPSF VS+G V+     GGH   G  G  G+G + GGGLGT
Subjt:  MSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSFL------------WSTHAPSFSVSIGQVAAC--FGGHGVPGD-GTAGAGFIGGGGLGT

KAG6419595.1 hypothetical protein SASPL_121817 [Salvia splendens]8.4e-0852.81Show/hide
Query:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSFLW------------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIGGGG
        MGR+ L  +SLALMVVHR  AAS  TSPSSTGQH S               STHAPSF VSIG V+  FGG         G G +GGGG
Subjt:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSFLW------------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIGGGG

PNT29076.1 hypothetical protein POPTR_006G008400 [Populus trichocarpa]1.6e-0652.75Show/hide
Query:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSF------LW------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIGGGGLG
        MGR+ L  +SLAL+ V RHTAASKST PSS+GQH S       +W      STHAP+  VS+GQV +CFGG G  G    G G  GG G G
Subjt:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSF------LW------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIGGGGLG

TrEMBL top hitse value%identityAlignment
A0A0A0L1W8 Uncharacterized protein2.1e-1259.57Show/hide
Query:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSF------LW------STHAPSFSVSIGQVA--ACFGGHGVPGDGTAGAGFIGGGGLGT
        MG + L F+SLALMVVH+ TAASKSTSPS TGQ V F      +W      STHAP+FSVS+G V+     GG GV GDGT GAGF GG G GT
Subjt:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSF------LW------STHAPSFSVSIGQVA--ACFGGHGVPGDGTAGAGFIGGGGLGT

A0A6A1V1H8 Uncharacterized protein4.3e-1059.14Show/hide
Query:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSFLW------------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIG-GGGLGT
        MG M L F+SLAL+VV RHTAASKS SP STGQHVS               STHAP+F VS+G V  C GG    GDGT G G IG GGGLGT
Subjt:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSFLW------------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIG-GGGLGT

A0A6N2KCG4 Uncharacterized protein1.2e-0752.69Show/hide
Query:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSF------LW------STHAPSFSVSIGQVAACFGGHGVPGDGTAG--AGFIGGGGLG
        MG + L  +SLALMVV RH AASKST PSSTGQH S       +W      STHAP+  VS+GQV +CFGG  + G G  G   G  GGG +G
Subjt:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSF------LW------STHAPSFSVSIGQVAACFGGHGVPGDGTAG--AGFIGGGGLG

I3SLI2 Uncharacterized protein1.8e-0858.24Show/hide
Query:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSFLW------------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIGGGGLG
        MG M L  +SLALMVV RHTAASKSTSP+STGQ V                STHAPSF VSIG V  C GG    GDGT G    GGGGLG
Subjt:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSFLW------------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIGGGGLG

U5G562 Uncharacterized protein7.6e-0752.75Show/hide
Query:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSF------LW------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIGGGGLG
        MGR+ L  +SLAL+ V RHTAASKST PSS+GQH S       +W      STHAP+  VS+GQV +CFGG G  G    G G  GG G G
Subjt:  MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSF------LW------STHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIGGGGLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGATGAGTTTGACGTTCAAAAGCTTGGCTTTAATGGTGGTACACAGACACACAGCAGCATCCAAATCCACAAGCCCTTCAAGCACCGGGCAGCATGTTTCTTT
CCTATGGTCCACACACGCCCCCAGCTTCAGCGTGTCGATCGGGCAAGTCGCTGCTTGCTTCGGCGGGCACGGCGTCCCCGGTGACGGCACTGCTGGAGCTGGCTTTATTG
GTGGAGGCGGACTAGGCACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGATGAGTTTGACGTTCAAAAGCTTGGCTTTAATGGTGGTACACAGACACACAGCAGCATCCAAATCCACAAGCCCTTCAAGCACCGGGCAGCATGTTTCTTT
CCTATGGTCCACACACGCCCCCAGCTTCAGCGTGTCGATCGGGCAAGTCGCTGCTTGCTTCGGCGGGCACGGCGTCCCCGGTGACGGCACTGCTGGAGCTGGCTTTATTG
GTGGAGGCGGACTAGGCACGTAG
Protein sequenceShow/hide protein sequence
MGRMSLTFKSLALMVVHRHTAASKSTSPSSTGQHVSFLWSTHAPSFSVSIGQVAACFGGHGVPGDGTAGAGFIGGGGLGT