; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013580 (gene) of Chayote v1 genome

Gene IDSed0013580
OrganismSechium edule (Chayote v1)
Descriptionnuclear pore complex protein NUP43
Genome locationLG11:4512392..4515580
RNA-Seq ExpressionSed0013580
SyntenySed0013580
Gene Ontology termsGO:0031080 - nuclear pore outer ring (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586038.1 Nuclear pore complex protein NUP43, partial [Cucurbita argyrosperma subsp. sororia]9.5e-18989.77Show/hide
Query:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV
        MAI +PQQQPQIH+FPQFKYVDGVRWLPPLSAFGRFAV+ALFDSDSDSSSIEIHS++QNPLD+APQS W SPSR+SSLKTSQ YQNPLVFAST +GSLHV
Subjt:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV

Query:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG
        LSVEPMDA +DSELSVPEK LHD  + CVDVMDGGGECL+VAEDGRVNLVSVGESGL+YRR+FDSNGLVSYTA KWASP+EFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS
        GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGT FAWDLRWQQQPIILSG EG+KTSN  PCESEVWEVHYDPYIK  SGNIGG+SSSQILPAMICS
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS

Query:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP
        EDGI+TSIEQGKQP+ELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Subjt:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP

XP_022158135.1 nuclear pore complex protein NUP43 [Momordica charantia]1.2e-18389.24Show/hide
Query:  MAITNP-QQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLH
        MAI +P QQQPQIH+FP FKYVDGVRWLP LSAFGRFAVIA FDSDSDSSSIEIHSV+QN LDIAP S W SPSRVSSLKTSQ YQNPLVFAST +GSLH
Subjt:  MAITNP-QQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLH

Query:  VLSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKP
        VLSVEPMDA +DSEL+VPEKTLHDG + CVDVMDGGGECL+VAEDGRVNLVSVGESGL+YRR+FDSNGLVSYTA KWASP+EFATGGCGFSLQWWDQRKP
Subjt:  VLSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKP

Query:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMIC
        GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSG E +K SNL PCESEVWEVHYDPYIK  S NIGG+SSSQILPAMIC
Subjt:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMIC

Query:  SEDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP
        SEDGILTS+EQGKQP+ELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Subjt:  SEDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP

XP_022937892.1 nuclear pore complex protein NUP43 [Cucurbita moschata]4.3e-18990.06Show/hide
Query:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV
        MAI +PQQQPQIH+FPQFKYVDGVRWLPPLSAFGRFAV+ALFDSDSDSSSIEIHS++QNPLD+APQS W SPSR+SSLKTSQ YQNPLVFAST +GSLHV
Subjt:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV

Query:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG
        LSVEPMDA +DSELSVPEK LHD  + CVDVMDGGGECL+VAEDGRVNLVSVGESGL+YRR+FDSNGLVSYTA KWASP+EFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS
        GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSG EG+KTSN  PCESEVWEVHYDPYIK  SGNIGG+SSSQILPAMICS
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS

Query:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP
        EDGI+TSIEQGKQP+ELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Subjt:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP

XP_022969681.1 nuclear pore complex protein NUP43 [Cucurbita maxima]6.2e-18889.2Show/hide
Query:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV
        MAI +PQQQPQIH+FPQFKY+DGVRWLPPLSAFGRFAV+ALFDSDSDSSSIEIHS++QNPLD+APQSAW SPSR+SSLKTSQ YQNPLVFAST +GSLHV
Subjt:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV

Query:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG
        LSVEPMDA +DSELSVPEK LHD  + CVDVMD GGECL+VAEDGRVNLVSVGESGL+YRR+FDSNGLVSYTA KWASP+EFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS
        GAV QFKGDWASGIVHC+DIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSG EG+KTSN  PCESEVWEV YDPYIK  SGNIGG+SSSQILPAMICS
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS

Query:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP
        EDGI+TSIEQGKQP+ELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP
Subjt:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP

XP_023538014.1 nuclear pore complex protein NUP43 [Cucurbita pepo subsp. pepo]1.2e-18890.06Show/hide
Query:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV
        MAI +PQQQPQIH+FPQFKYVDGVRWLPPLSAFGRFAV+ALFDSDSDSSSIEIHS++QNPLD+APQSAW SPSRVSSLKTSQ YQNPLVFAST +GSLHV
Subjt:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV

Query:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG
        LSVEPMDA +DSELSVPEK LHD  + CVDVMDGGGECL+VAEDGRVNLVSVGESGL+YRR+FDSNGLVSYTA KWASP+EFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS
        GAVSQFKGDWASGIVHC+DIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSG EG+KTSN  PCESEVWEVHYDPYIK  SGNIGG+SSSQILPAMICS
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS

Query:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP
        EDGI+TSIEQGKQP+ELLAEPCAINGFDID Q PSEVICNLEWESVAILSRP
Subjt:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP

TrEMBL top hitse value%identityAlignment
A0A1S3BTA6 nuclear pore complex protein NUP438.4e-18388.32Show/hide
Query:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV
        MAI +PQQQPQIH+FPQFKYVDGVRWLPPLSAF RFAVIALFDSD DSSSIEIHS++QNPLDIAP S W SPSRVSSLKTSQL+QNPLVFAST +GSLHV
Subjt:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV

Query:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG
        LSVEPM+A +DSELSVPEK LHDG + CVDVMD GGECL+V+EDGRVNLVSVGESGL+YRR+FDSNGLVSY AVKWASP+EF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS
        GAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSG EGTKTSN  PCESEVWEVHYDPYIK  SGN+GG+SS+QILPAMICS
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS

Query:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSR
        EDGILTSIEQGK+P+ELLAEPCAINGFDID QHPSEVICNLEWESVAILSR
Subjt:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSR

A0A5D3BAS9 Nuclear pore complex protein NUP438.4e-18388.32Show/hide
Query:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV
        MAI +PQQQPQIH+FPQFKYVDGVRWLPPLSAF RFAVIALFDSD DSSSIEIHS++QNPLDIAP S W SPSRVSSLKTSQL+QNPLVFAST +GSLHV
Subjt:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV

Query:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG
        LSVEPM+A +DSELSVPEK LHDG + CVDVMD GGECL+V+EDGRVNLVSVGESGL+YRR+FDSNGLVSY AVKWASP+EF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS
        GAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSG EGTKTSN  PCESEVWEVHYDPYIK  SGN+GG+SS+QILPAMICS
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS

Query:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSR
        EDGILTSIEQGK+P+ELLAEPCAINGFDID QHPSEVICNLEWESVAILSR
Subjt:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSR

A0A6J1DUZ0 nuclear pore complex protein NUP435.8e-18489.24Show/hide
Query:  MAITNP-QQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLH
        MAI +P QQQPQIH+FP FKYVDGVRWLP LSAFGRFAVIA FDSDSDSSSIEIHSV+QN LDIAP S W SPSRVSSLKTSQ YQNPLVFAST +GSLH
Subjt:  MAITNP-QQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLH

Query:  VLSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKP
        VLSVEPMDA +DSEL+VPEKTLHDG + CVDVMDGGGECL+VAEDGRVNLVSVGESGL+YRR+FDSNGLVSYTA KWASP+EFATGGCGFSLQWWDQRKP
Subjt:  VLSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKP

Query:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMIC
        GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSG E +K SNL PCESEVWEVHYDPYIK  S NIGG+SSSQILPAMIC
Subjt:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMIC

Query:  SEDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP
        SEDGILTS+EQGKQP+ELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Subjt:  SEDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP

A0A6J1FCG9 nuclear pore complex protein NUP432.1e-18990.06Show/hide
Query:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV
        MAI +PQQQPQIH+FPQFKYVDGVRWLPPLSAFGRFAV+ALFDSDSDSSSIEIHS++QNPLD+APQS W SPSR+SSLKTSQ YQNPLVFAST +GSLHV
Subjt:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV

Query:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG
        LSVEPMDA +DSELSVPEK LHD  + CVDVMDGGGECL+VAEDGRVNLVSVGESGL+YRR+FDSNGLVSYTA KWASP+EFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS
        GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSG EG+KTSN  PCESEVWEVHYDPYIK  SGNIGG+SSSQILPAMICS
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS

Query:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP
        EDGI+TSIEQGKQP+ELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Subjt:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP

A0A6J1HYH3 nuclear pore complex protein NUP433.0e-18889.2Show/hide
Query:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV
        MAI +PQQQPQIH+FPQFKY+DGVRWLPPLSAFGRFAV+ALFDSDSDSSSIEIHS++QNPLD+APQSAW SPSR+SSLKTSQ YQNPLVFAST +GSLHV
Subjt:  MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHV

Query:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG
        LSVEPMDA +DSELSVPEK LHD  + CVDVMD GGECL+VAEDGRVNLVSVGESGL+YRR+FDSNGLVSYTA KWASP+EFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS
        GAV QFKGDWASGIVHC+DIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSG EG+KTSN  PCESEVWEV YDPYIK  SGNIGG+SSSQILPAMICS
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICS

Query:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP
        EDGI+TSIEQGKQP+ELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP
Subjt:  EDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP

SwissProt top hitse value%identityAlignment
Q24JJ9 Nuclear pore complex protein NUP433.5e-10957.97Show/hide
Query:  QQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLD-------IAPQSAWASPSRVSSLKTSQL-----YQNPLVFASTC
        Q   Q+H+ PQ KYVDGVRWLP  SA  RF   A +D+D DSSSIEI S+  NP         I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLD-------IAPQSAWASPSRVSSLKTSQL-----YQNPLVFASTC

Query:  SGSLHVLSVEPMD-ALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVS-VGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQ
        SGSLHVL ++ ++ A I+   +   +  H G V  VD  + GGEC++V EDGRVN+V  V   GL YR+VFD NGLV+Y AVKWASP+EF TGG GF LQ
Subjt:  SGSLHVLSVEPMD-ALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVS-VGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQ

Query:  WWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGL
         WDQRK G AVSQ KG+W     S IVH IDIHPSRKHTC+AGGS GTVFAWDLRW QQPI+LSG   ++  N    ESEVWEV YD Y KS       +
Subjt:  WWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGL

Query:  SSSQILPAMICSEDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP
        SSS+ILP M CSEDGIL  IEQG++P+ELLAEPCAIN FDID Q+P +VIC+LEWES+A+ SRP
Subjt:  SSSQILPAMICSEDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP

Arabidopsis top hitse value%identityAlignment
AT4G30840.1 Transducin/WD40 repeat-like superfamily protein2.5e-11057.97Show/hide
Query:  QQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLD-------IAPQSAWASPSRVSSLKTSQL-----YQNPLVFASTC
        Q   Q+H+ PQ KYVDGVRWLP  SA  RF   A +D+D DSSSIEI S+  NP         I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLD-------IAPQSAWASPSRVSSLKTSQL-----YQNPLVFASTC

Query:  SGSLHVLSVEPMD-ALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVS-VGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQ
        SGSLHVL ++ ++ A I+   +   +  H G V  VD  + GGEC++V EDGRVN+V  V   GL YR+VFD NGLV+Y AVKWASP+EF TGG GF LQ
Subjt:  SGSLHVLSVEPMD-ALIDSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVS-VGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQ

Query:  WWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGL
         WDQRK G AVSQ KG+W     S IVH IDIHPSRKHTC+AGGS GTVFAWDLRW QQPI+LSG   ++  N    ESEVWEV YD Y KS       +
Subjt:  WWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGL

Query:  SSSQILPAMICSEDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP
        SSS+ILP M CSEDGIL  IEQG++P+ELLAEPCAIN FDID Q+P +VIC+LEWES+A+ SRP
Subjt:  SSSQILPAMICSEDGILTSIEQGKQPMELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCACAAATCCCCAGCAGCAACCTCAAATCCACAAGTTCCCGCAATTCAAGTACGTTGACGGAGTTCGTTGGCTTCCACCGCTCTCCGCGTTCGGCCGATTCGC
CGTCATTGCCCTGTTCGACTCCGATTCCGACTCATCCTCCATTGAAATCCACTCTGTTTCTCAAAATCCGCTGGATATAGCTCCGCAATCAGCTTGGGCGTCGCCTTCAA
GAGTCTCTTCTCTCAAAACCTCACAGCTCTACCAAAATCCCCTCGTTTTCGCTTCGACGTGTTCCGGTTCTCTTCATGTTCTATCTGTCGAGCCAATGGATGCGTTGATC
GACTCGGAGCTGTCGGTGCCGGAGAAGACGCTGCACGACGGATCTGTGGTTTGTGTGGATGTGATGGATGGGGGAGGTGAATGTTTGAGTGTTGCGGAAGATGGACGGGT
GAATTTGGTGAGCGTTGGGGAATCTGGATTGGATTATCGTCGGGTGTTTGATAGTAATGGACTGGTTTCGTATACTGCAGTGAAATGGGCATCGCCCTCTGAGTTTGCTA
CTGGAGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCTGGTGGAGCTGTTTCTCAGTTTAAGGGCGATTGGGCTTCTGGCATTGTTCACTGCATTGATATT
CATCCATCACGAAAGCATACTTGTTTGGCAGGAGGCTCTTTTGGTACTGTCTTTGCCTGGGATTTGAGGTGGCAACAACAGCCTATCATTCTCTCAGGTCAAGAAGGGAC
CAAAACATCAAATCTTTTGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCCTATATTAAGTCGGGCAGTGGCAACATAGGCGGCTTGTCATCTTCGCAGATTT
TACCTGCTATGATTTGCTCTGAGGACGGGATTTTAACTAGTATTGAGCAAGGCAAGCAACCCATGGAACTGCTTGCAGAACCTTGTGCAATTAATGGTTTTGACATTGAT
CATCAACACCCGTCGGAAGTGATATGTAATTTGGAGTGGGAGTCGGTAGCCATCCTGTCAAGACCTTAA
mRNA sequenceShow/hide mRNA sequence
TTGCAATTGTACAATTTTTCCATCTCTTCGTTCAAAGTGGAAACCAAGCTCCCTTAAACCCTAACAATGGCGATCACAAATCCCCAGCAGCAACCTCAAATCCACAAGTT
CCCGCAATTCAAGTACGTTGACGGAGTTCGTTGGCTTCCACCGCTCTCCGCGTTCGGCCGATTCGCCGTCATTGCCCTGTTCGACTCCGATTCCGACTCATCCTCCATTG
AAATCCACTCTGTTTCTCAAAATCCGCTGGATATAGCTCCGCAATCAGCTTGGGCGTCGCCTTCAAGAGTCTCTTCTCTCAAAACCTCACAGCTCTACCAAAATCCCCTC
GTTTTCGCTTCGACGTGTTCCGGTTCTCTTCATGTTCTATCTGTCGAGCCAATGGATGCGTTGATCGACTCGGAGCTGTCGGTGCCGGAGAAGACGCTGCACGACGGATC
TGTGGTTTGTGTGGATGTGATGGATGGGGGAGGTGAATGTTTGAGTGTTGCGGAAGATGGACGGGTGAATTTGGTGAGCGTTGGGGAATCTGGATTGGATTATCGTCGGG
TGTTTGATAGTAATGGACTGGTTTCGTATACTGCAGTGAAATGGGCATCGCCCTCTGAGTTTGCTACTGGAGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAG
CCTGGTGGAGCTGTTTCTCAGTTTAAGGGCGATTGGGCTTCTGGCATTGTTCACTGCATTGATATTCATCCATCACGAAAGCATACTTGTTTGGCAGGAGGCTCTTTTGG
TACTGTCTTTGCCTGGGATTTGAGGTGGCAACAACAGCCTATCATTCTCTCAGGTCAAGAAGGGACCAAAACATCAAATCTTTTGCCATGTGAAAGTGAGGTTTGGGAGG
TTCACTATGATCCCTATATTAAGTCGGGCAGTGGCAACATAGGCGGCTTGTCATCTTCGCAGATTTTACCTGCTATGATTTGCTCTGAGGACGGGATTTTAACTAGTATT
GAGCAAGGCAAGCAACCCATGGAACTGCTTGCAGAACCTTGTGCAATTAATGGTTTTGACATTGATCATCAACACCCGTCGGAAGTGATATGTAATTTGGAGTGGGAGTC
GGTAGCCATCCTGTCAAGACCTTAAATTTCAGAAGTCGTCATCTTTTTTAAATCAGTTGGCTCCAATGCTCTATGTCAATCCCTTTGATGACGTAAGGATTTCTGTATCT
ATATCTTTTTACCTTTCATGAGTGCGTGCAGTTTCTTAGTTTTAGTTTTAGGCTCATGTAAAATTTGGGGTTGTTGCACTACATAATTGGAACTGAGTTTTGATATGGAG
TATCTAATACCATATCAGGGTGATATGGATGATGTAATTTTGCATTATATTTTATAAGTTCTTCATTCTACTCCTCAACATGATGGCTATACTTTTTTTTTTTTTTTTTA
TACAAATC
Protein sequenceShow/hide protein sequence
MAITNPQQQPQIHKFPQFKYVDGVRWLPPLSAFGRFAVIALFDSDSDSSSIEIHSVSQNPLDIAPQSAWASPSRVSSLKTSQLYQNPLVFASTCSGSLHVLSVEPMDALI
DSELSVPEKTLHDGSVVCVDVMDGGGECLSVAEDGRVNLVSVGESGLDYRRVFDSNGLVSYTAVKWASPSEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDI
HPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGQEGTKTSNLLPCESEVWEVHYDPYIKSGSGNIGGLSSSQILPAMICSEDGILTSIEQGKQPMELLAEPCAINGFDID
HQHPSEVICNLEWESVAILSRP