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Sed0013640 (gene) of Chayote v1 genome

Gene IDSed0013640
OrganismSechium edule (Chayote v1)
DescriptionTubulin-specific chaperone A
Genome locationLG09:1011321..1014322
RNA-Seq ExpressionSed0013640
SyntenySed0013640
Gene Ontology termsGO:0007021 - tubulin complex assembly (biological process)
GO:0007023 - post-chaperonin tubulin folding pathway (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0048487 - beta-tubulin binding (molecular function)
InterPro domainsIPR004226 - Tubulin binding cofactor A
IPR036126 - Tubulin binding cofactor A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155762.1 tubulin-folding cofactor A [Momordica charantia]8.9e-4890.27Show/hide
Query:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST
        MAT++NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLEA+  DLKG LAELEESTQEKGPEFD+ARST
Subjt:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST

Query:  ITEVESFLQTTEE
        I+EVE+FL+TTEE
Subjt:  ITEVESFLQTTEE

XP_022959143.1 tubulin-folding cofactor A [Cucurbita moschata]2.6e-4791.15Show/hide
Query:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST
        MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAA  DLKGTL ELE+STQ KGPEF+DARS 
Subjt:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST

Query:  ITEVESFLQTTEE
        ITE+ESFL+TTEE
Subjt:  ITEVESFLQTTEE

XP_023006149.1 tubulin-folding cofactor A [Cucurbita maxima]2.0e-4791.15Show/hide
Query:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST
        MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE+A  DLKGTL ELE+STQ KGPEFDDARS 
Subjt:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST

Query:  ITEVESFLQTTEE
        ITE+ESFL+TTEE
Subjt:  ITEVESFLQTTEE

XP_023548059.1 tubulin-folding cofactor A [Cucurbita pepo subsp. pepo]4.4e-4790.27Show/hide
Query:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST
        MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE+A  DLKGTL ELE+STQ +GPEFDDARS 
Subjt:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST

Query:  ITEVESFLQTTEE
        ITE+ESFL+TTEE
Subjt:  ITEVESFLQTTEE

XP_038907024.1 tubulin-folding cofactor A [Benincasa hispida]4.0e-4892.04Show/hide
Query:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST
        MAT+KNLKIKTATCKRIIKELHSYEKEVE EAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE+A  DLKG LAELE+STQEKGPEF+DARST
Subjt:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST

Query:  ITEVESFLQTTEE
        ITE+ESFLQTTEE
Subjt:  ITEVESFLQTTEE

TrEMBL top hitse value%identityAlignment
A0A1U8PW82 Tubulin-specific chaperone A1.0e-4484.82Show/hide
Query:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST
        MAT++NLKIKT+TCKRI+KELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEA+  DLK TLAELEE+ +++GPEF+DARST
Subjt:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST

Query:  ITEVESFLQTTE
        ITEVE   QTTE
Subjt:  ITEVESFLQTTE

A0A5D2SZW3 Tubulin-specific chaperone A7.6e-4584.82Show/hide
Query:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST
        MAT++NLKIKT+TCKRI+KELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEA+  DLK TLAELEE+ +++GPEF+DARST
Subjt:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST

Query:  ITEVESFLQTTE
        ITEVE+  QTTE
Subjt:  ITEVESFLQTTE

A0A6J1DQ83 Tubulin-specific chaperone A4.3e-4890.27Show/hide
Query:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST
        MAT++NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLEA+  DLKG LAELEESTQEKGPEFD+ARST
Subjt:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST

Query:  ITEVESFLQTTEE
        I+EVE+FL+TTEE
Subjt:  ITEVESFLQTTEE

A0A6J1H416 Tubulin-specific chaperone A1.3e-4791.15Show/hide
Query:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST
        MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAA  DLKGTL ELE+STQ KGPEF+DARS 
Subjt:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST

Query:  ITEVESFLQTTEE
        ITE+ESFL+TTEE
Subjt:  ITEVESFLQTTEE

A0A6J1KV46 Tubulin-specific chaperone A9.6e-4891.15Show/hide
Query:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST
        MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE+A  DLKGTL ELE+STQ KGPEFDDARS 
Subjt:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST

Query:  ITEVESFLQTTEE
        ITE+ESFL+TTEE
Subjt:  ITEVESFLQTTEE

SwissProt top hitse value%identityAlignment
O04350 Tubulin-folding cofactor A1.0e-4175Show/hide
Query:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST
        MATI+NLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRMM+PDCHKRLE+A  DLK TLAELEE+ +++GPE +DA+ T
Subjt:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST

Query:  ITEVESFLQTTE
        + +VE    T +
Subjt:  ITEVESFLQTTE

O75347 Tubulin-specific chaperone A3.9e-1440.2Show/hide
Query:  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARSTITE
        ++ +KIKT   KR++KE   YEKE +++  K   M+ +  + YD+K+Q  +L ESRMM+PDC +RLEAA+ DL+  L    E   E+  E+ +AR  +  
Subjt:  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARSTITE

Query:  VE
        V+
Subjt:  VE

P48428 Tubulin-specific chaperone A5.7e-1339.22Show/hide
Query:  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARSTITE
        ++ +KIKT   +R++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+PDC +RLEAA+ DL+  L    E   E+  E+ +AR  +  
Subjt:  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARSTITE

Query:  VE
        V+
Subjt:  VE

P80585 Tubulin-specific chaperone A7.4e-1341.18Show/hide
Query:  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARSTITE
        ++ +KIKT   KR+ KE   YEKE +++  K   MK +  D Y +K+Q  +L ESRMM+PDC +RLE A  DL   L    E   E+  E+ +ARS +  
Subjt:  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARSTITE

Query:  VE
        V+
Subjt:  VE

Q6PEC1 Tubulin-specific chaperone A2.0e-1340.2Show/hide
Query:  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARSTITE
        ++ +KIKT   KR++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+PDC +RLEAA+ DL+  L    E   E+  E+ +AR  +  
Subjt:  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARSTITE

Query:  VE
        V+
Subjt:  VE

Arabidopsis top hitse value%identityAlignment
AT2G30410.1 tubulin folding cofactor A (KIESEL)7.1e-4375Show/hide
Query:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST
        MATI+NLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRMM+PDCHKRLE+A  DLK TLAELEE+ +++GPE +DA+ T
Subjt:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST

Query:  ITEVESFLQTTE
        + +VE    T +
Subjt:  ITEVESFLQTTE

AT2G30410.2 tubulin folding cofactor A (KIESEL)7.1e-4375Show/hide
Query:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST
        MATI+NLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRMM+PDCHKRLE+A  DLK TLAELEE+ +++GPE +DA+ T
Subjt:  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARST

Query:  ITEVESFLQTTE
        + +VE    T +
Subjt:  ITEVESFLQTTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCATAAAAAACTTGAAGATTAAGACAGCAACCTGTAAACGCATTATCAAGGAGTTGCATTCTTATGAGAAAGAGGTAGAGAGAGAAGCTGCCAAAACAGCTGA
CATGAAAGAAAAAGGAGCTGACCCTTATGACCTTAAGCAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGACTGTCACAAGCGTCTCGAGGCTGCCTTTT
TCGATCTGAAAGGAACATTGGCTGAATTGGAAGAATCAACACAAGAGAAAGGCCCCGAGTTCGATGACGCTCGGAGCACAATCACCGAGGTCGAAAGTTTCCTTCAGACA
ACAGAGGAATAA
mRNA sequenceShow/hide mRNA sequence
CCCGACTCTATACTGGTCTCGGTGGAAAACTCCATTGATTCAATAGAGCAAAAACCCGAAGGTCACATTAGAAGAAATTAGGGTTTCTTCGATTCCAAGTTCTTCAGTAC
AGGGTAAGCACGCCCGTCCCTAAGCTAGGCACCGAGAGACATCGAAGGAGTAATGCTACGGGAGAGTCTTGAACCTGGAACCTTGGAGGGAGTATACTTTTAAAACCCAA
GTTTTCAACCACTGTGCCACCTCTTGGGAACGAAATGTAACTATGGCTACCATAAAAAACTTGAAGATTAAGACAGCAACCTGTAAACGCATTATCAAGGAGTTGCATTC
TTATGAGAAAGAGGTAGAGAGAGAAGCTGCCAAAACAGCTGACATGAAAGAAAAAGGAGCTGACCCTTATGACCTTAAGCAACAGGAAAATGTGCTGGCTGAATCAAGGA
TGATGGTTCCCGACTGTCACAAGCGTCTCGAGGCTGCCTTTTTCGATCTGAAAGGAACATTGGCTGAATTGGAAGAATCAACACAAGAGAAAGGCCCCGAGTTCGATGAC
GCTCGGAGCACAATCACCGAGGTCGAAAGTTTCCTTCAGACAACAGAGGAATAATAGTGAGTTTGACACTGATCTTAATTACCTAAAAACAGAATTTCTTATGATGCCTC
ATTGCTTTAGTTCCTCATTATCAGCCTTTGGTTGCATTGCTATGTTATACTTTGGAGAGTTTTATGATGGAGTAACAAGTCAACTTCTCTTGTGGACATTGTATATGCTG
AAATATTTTGTGATGGTCTTTGTCTAAATTTAGAGGAATATATTAACATATACAATTACAACTTAGCACATGCTACGTAATCGTTTGATTAATTAGAGAGTTTGGTATAT
TCAAATAATAATAAAAAAGTGG
Protein sequenceShow/hide protein sequence
MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAAFFDLKGTLAELEESTQEKGPEFDDARSTITEVESFLQT
TEE